RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 BICC1Q9H694 974 aaKnown RBP11.37□□□□□ -0.59
SS18-220ENST00000582092 TBC1D2BQ9UPU7 963 aa11.37□□□□□ -0.59
SS18-220ENST00000582092 SCN7AQ01118 1682 aa11.36□□□□□ -0.59
SS18-220ENST00000582092 POLRMTO00411 1230 aaKnown RBP11.36□□□□□ -0.59
SS18-220ENST00000582092 ERC2O15083 957 aa11.36□□□□□ -0.59
SS18-220ENST00000582092 SERPINB2P05120 415 aa11.36□□□□□ -0.59
SS18-220ENST00000582092 PDE1AP54750 535 aa11.36□□□□□ -0.59
SS18-220ENST00000582092 NFIXQ14938 502 aa11.36□□□□□ -0.59
SS18-220ENST00000582092 CLEC4GQ6UXB4 293 aa11.36□□□□□ -0.59
SS18-220ENST00000582092 BICDL1Q6ZP65 573 aa11.36□□□□□ -0.59
SS18-220ENST00000582092 TTLL7Q6ZT98 887 aa11.36□□□□□ -0.59
SS18-220ENST00000582092 RILPL2Q969X0 211 aa11.36□□□□□ -0.59
SS18-220ENST00000582092 SETDB2Q96T68 719 aa11.36□□□□□ -0.59
SS18-220ENST00000582092 IL1RAPL2Q9NP60 686 aa11.36□□□□□ -0.59
SS18-220ENST00000582092 PIM2Q9P1W9 311 aa11.36□□□□□ -0.59
SS18-220ENST00000582092 BCS1LQ9Y276 419 aa11.36□□□□□ -0.59
SS18-220ENST00000582092 ARFGEF1Q9Y6D6 1849 aa11.35□□□□□ -0.59
SS18-220ENST00000582092 A0A0G2JLW4 131 aa11.35□□□□□ -0.59
SS18-220ENST00000582092 RGL2O15211 777 aa11.35□□□□□ -0.59
SS18-220ENST00000582092 SEC24BO95487 1268 aa11.35□□□□□ -0.59
SS18-220ENST00000582092 YBX3P16989 372 aaKnown RBP eCLIP11.35□□□□□ -0.59
SS18-220ENST00000582092 DDR1Q08345 913 aa11.35□□□□□ -0.59
SS18-220ENST00000582092 TCIRG1Q13488 830 aa11.35□□□□□ -0.59
SS18-220ENST00000582092 OSBPL3Q9H4L5 887 aa11.35□□□□□ -0.59
SS18-220ENST00000582092 CARMIL3Q8ND23 1372 aa11.35□□□□□ -0.59
SS18-220ENST00000582092 BCORQ6W2J9 1755 aa11.35□□□□□ -0.59
SS18-220ENST00000582092 BRCA1P38398 1863 aaKnown RBP11.35□□□□□ -0.59
SS18-220ENST00000582092 NRXN2Q9P2S2 1712 aa11.35□□□□□ -0.59
SS18-220ENST00000582092 AOX1Q06278 1338 aa11.35□□□□□ -0.59
SS18-220ENST00000582092 REC8O95072 547 aa11.34□□□□□ -0.59
SS18-220ENST00000582092 DPEP1P16444 411 aa11.34□□□□□ -0.59
SS18-220ENST00000582092 ST5P78524 1137 aa11.34□□□□□ -0.59
SS18-220ENST00000582092 TBC1D9Q6ZT07 1266 aa11.34□□□□□ -0.59
SS18-220ENST00000582092 LRP10Q7Z4F1 713 aa11.34□□□□□ -0.59
SS18-220ENST00000582092 OTUD7AQ8TE49 926 aaPredicted RBP11.34□□□□□ -0.59
SS18-220ENST00000582092 TBC1D32Q96NH3 1257 aa11.34□□□□□ -0.59
SS18-220ENST00000582092 NUP98P52948 1817 aa11.33□□□□□ -0.6
SS18-220ENST00000582092 KIAA1551Q9HCM1 1747 aa11.33□□□□□ -0.6
SS18-220ENST00000582092 H0YIN7 160 aa11.33□□□□□ -0.6
SS18-220ENST00000582092 CAMTA2O94983 1202 aa11.33□□□□□ -0.6
SS18-220ENST00000582092 SDSP20132 328 aa11.33□□□□□ -0.6
SS18-220ENST00000582092 PDE6BP35913 854 aa11.33□□□□□ -0.6
SS18-220ENST00000582092 DALRD3Q5D0E6 543 aaKnown RBP11.33□□□□□ -0.6
SS18-220ENST00000582092 TAF7LQ5H9L4 462 aa11.33□□□□□ -0.6
SS18-220ENST00000582092 TBC1D9BQ66K14 1250 aa11.33□□□□□ -0.6
SS18-220ENST00000582092 NUTM1Q86Y26 1132 aa11.33□□□□□ -0.6
SS18-220ENST00000582092 CNTROBQ8N137 903 aa11.33□□□□□ -0.6
SS18-220ENST00000582092 JARID2Q92833 1246 aaPredicted RBP11.33□□□□□ -0.6
SS18-220ENST00000582092 SIL1Q9H173 461 aa11.33□□□□□ -0.6
SS18-220ENST00000582092 BCL2L12Q9HB09 334 aa11.33□□□□□ -0.6
SS18-220ENST00000582092 STAP2Q9UGK3 403 aa11.33□□□□□ -0.6
SS18-220ENST00000582092 WWC3Q9ULE0 1092 aa11.33□□□□□ -0.6
SS18-220ENST00000582092 MAP3K15Q6ZN16 1313 aa11.33□□□□□ -0.6
SS18-220ENST00000582092 H7C1W4 665 aa11.32□□□□□ -0.6
SS18-220ENST00000582092 GLRX3O76003 335 aaKnown RBP11.32□□□□□ -0.6
SS18-220ENST00000582092 HSP90B1P14625 803 aaKnown RBP11.32□□□□□ -0.6
SS18-220ENST00000582092 MCCP23508 829 aa11.32□□□□□ -0.6
SS18-220ENST00000582092 RTL5Q5HYW3 569 aaPredicted RBP11.32□□□□□ -0.6
SS18-220ENST00000582092 TPTE2Q6XPS3 522 aa11.32□□□□□ -0.6
SS18-220ENST00000582092 AACSQ86V21 672 aa11.32□□□□□ -0.6
SS18-220ENST00000582092 CNBD1Q8NA66 436 aa11.32□□□□□ -0.6
SS18-220ENST00000582092 PA2G4Q9UQ80 394 aaKnown RBP11.32□□□□□ -0.6
SS18-220ENST00000582092 TTC41PQ6P2S7 1318 aa11.32□□□□□ -0.6
SS18-220ENST00000582092 ERVV-1B6SEH8 477 aa11.31□□□□□ -0.6
SS18-220ENST00000582092 GSPT1P15170 499 aaKnown RBP11.31□□□□□ -0.6
SS18-220ENST00000582092 GTF2E1P29083 439 aaPredicted RBP11.31□□□□□ -0.6
SS18-220ENST00000582092 CCDC57Q2TAC2 916 aa11.31□□□□□ -0.6
SS18-220ENST00000582092 LMBR1LQ6UX01 489 aa11.31□□□□□ -0.6
SS18-220ENST00000582092 GIGYF2Q6Y7W6 1299 aaKnown RBP11.31□□□□□ -0.6
SS18-220ENST00000582092 ARHGAP27Q6ZUM4 889 aa11.31□□□□□ -0.6
SS18-220ENST00000582092 NBPF5PQ86XG9 351 aaPredicted RBP11.31□□□□□ -0.6
SS18-220ENST00000582092 BRIP1Q9BX63 1249 aa11.31□□□□□ -0.6
SS18-220ENST00000582092 DLEC1Q9Y238 1755 aa11.31□□□□□ -0.6
SS18-220ENST00000582092 TRIM28Q13263 835 aaKnown RBP11.3□□□□□ -0.6
SS18-220ENST00000582092 C2CD5Q86YS7 1000 aa11.3□□□□□ -0.6
SS18-220ENST00000582092 HSCBQ8IWL3 235 aa11.3□□□□□ -0.6
SS18-220ENST00000582092 TTLL6Q8N841 843 aa11.3□□□□□ -0.6
SS18-220ENST00000582092 ZNF784Q8NCA9 323 aaPredicted RBP11.3□□□□□ -0.6
SS18-220ENST00000582092 RUFY2Q8WXA3 655 aa11.3□□□□□ -0.6
SS18-220ENST00000582092 NYXQ9GZU5 481 aa11.3□□□□□ -0.6
SS18-220ENST00000582092 COPRSQ9NQ92 184 aa11.3□□□□□ -0.6
SS18-220ENST00000582092 ECHDC1Q9NTX5 307 aa11.3□□□□□ -0.6
SS18-220ENST00000582092 NIP7Q9Y221 180 aaKnown RBP eCLIP11.3□□□□□ -0.6
SS18-220ENST00000582092 ARFGEF2Q9Y6D5 1785 aa11.29□□□□□ -0.6
SS18-220ENST00000582092 PCCAP05165 728 aaPredicted RBP11.29□□□□□ -0.6
SS18-220ENST00000582092 KCNA3P22001 575 aa11.29□□□□□ -0.6
SS18-220ENST00000582092 CHRNA5P30532 468 aa11.29□□□□□ -0.6
SS18-220ENST00000582092 KIAA1211Q6ZU35 1233 aa11.29□□□□□ -0.6
SS18-220ENST00000582092 ZBTB38Q8NAP3 1195 aaPredicted RBP11.29□□□□□ -0.6
SS18-220ENST00000582092 ISCA1Q9BUE6 129 aa11.29□□□□□ -0.6
SS18-220ENST00000582092 TRMT112Q9UI30 125 aaKnown RBP11.29□□□□□ -0.6
SS18-220ENST00000582092 ANKRD31Q8N7Z5 1873 aa11.28□□□□□ -0.6
SS18-220ENST00000582092 HIP1O00291 1037 aa11.28□□□□□ -0.6
SS18-220ENST00000582092 GPTP24298 496 aa11.28□□□□□ -0.6
SS18-220ENST00000582092 RABL6Q3YEC7 729 aaPredicted RBP11.28□□□□□ -0.6
SS18-220ENST00000582092 EPHA10Q5JZY3 1008 aa11.28□□□□□ -0.6
SS18-220ENST00000582092 TSHZ3Q63HK5 1081 aa11.28□□□□□ -0.6
SS18-220ENST00000582092 PRR5LQ6MZQ0 368 aa11.28□□□□□ -0.6
SS18-220ENST00000582092 CNKSR1Q969H4 720 aa11.28□□□□□ -0.6
SS18-220ENST00000582092 ZNF622Q969S3 477 aaKnown RBP eCLIP11.28□□□□□ -0.67e-7■■□□□ 12.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms