RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 ZNF219Q9P2Y4 722 aaPredicted RBP15.71■□□□□ 0.1
SRSF1-204ENST00000581979 CACNA1SQ13698 1873 aa15.7■□□□□ 0.1
SRSF1-204ENST00000581979 TIAM2Q8IVF5 1701 aa15.7■□□□□ 0.1
SRSF1-204ENST00000581979 DICER1Q9UPY3 1922 aaKnown RBP15.7■□□□□ 0.1
SRSF1-204ENST00000581979 GLTPD2A6NH11 291 aa15.7■□□□□ 0.1
SRSF1-204ENST00000581979 SKAP1Q86WV1 359 aa15.7■□□□□ 0.1
SRSF1-204ENST00000581979 RBM46Q8TBY0 533 aaKnown RBP15.7■□□□□ 0.1
SRSF1-204ENST00000581979 TAOK3Q9H2K8 898 aa15.7■□□□□ 0.1
SRSF1-204ENST00000581979 UBN2Q6ZU65 1347 aa15.7■□□□□ 0.1
SRSF1-204ENST00000581979 RIC1Q4ADV7 1423 aa15.69■□□□□ 0.1
SRSF1-204ENST00000581979 GNAI2P04899 355 aa15.69■□□□□ 0.1
SRSF1-204ENST00000581979 GTF2E1P29083 439 aaPredicted RBP15.69■□□□□ 0.1
SRSF1-204ENST00000581979 CRY2Q49AN0 593 aa15.69■□□□□ 0.1
SRSF1-204ENST00000581979 RPAP2Q8IXW5 612 aaPredicted RBP15.69■□□□□ 0.1
SRSF1-204ENST00000581979 RRAGCQ9HB90 399 aa15.69■□□□□ 0.1
SRSF1-204ENST00000581979 ABCC12Q96J65 1359 aa15.69■□□□□ 0.1
SRSF1-204ENST00000581979 ALDH1L1O75891 902 aa15.68■□□□□ 0.1
SRSF1-204ENST00000581979 UBTFL1P0CB47 393 aaPredicted RBP15.68■□□□□ 0.1
SRSF1-204ENST00000581979 GPTP24298 496 aa15.68■□□□□ 0.1
SRSF1-204ENST00000581979 ERFEQ4G0M1 354 aa15.68■□□□□ 0.1
SRSF1-204ENST00000581979 SUSD4Q5VX71 490 aa15.68■□□□□ 0.1
SRSF1-204ENST00000581979 CEP85Q6P2H3 762 aa15.68■□□□□ 0.1
SRSF1-204ENST00000581979 ANKRD13DQ6ZTN6 518 aa15.68■□□□□ 0.1
SRSF1-204ENST00000581979 NUTM1Q86Y26 1132 aa15.68■□□□□ 0.1
SRSF1-204ENST00000581979 C16orf71Q8IYS4 520 aaPredicted RBP15.68■□□□□ 0.1
SRSF1-204ENST00000581979 ANKRD44Q8N8A2 993 aa15.68■□□□□ 0.1
SRSF1-204ENST00000581979 ALDH1B1P30837 517 aa15.67■□□□□ 0.1
SRSF1-204ENST00000581979 RGS3P49796 1198 aa15.67■□□□□ 0.1
SRSF1-204ENST00000581979 NEXNQ0ZGT2 675 aa15.67■□□□□ 0.1
SRSF1-204ENST00000581979 CCDC93Q567U6 631 aa15.67■□□□□ 0.1
SRSF1-204ENST00000581979 SIRT2Q8IXJ6 389 aa15.67■□□□□ 0.1
SRSF1-204ENST00000581979 SMC5Q8IY18 1101 aa15.67■□□□□ 0.1
SRSF1-204ENST00000581979 USP44Q9H0E7 712 aa15.67■□□□□ 0.1
SRSF1-204ENST00000581979 NTSR2O95665 410 aa15.66■□□□□ 0.1
SRSF1-204ENST00000581979 PARP10Q53GL7 1025 aa15.66■□□□□ 0.1
SRSF1-204ENST00000581979 LINS1Q8NG48 757 aa15.66■□□□□ 0.1
SRSF1-204ENST00000581979 GCC1Q96CN9 775 aa15.66■□□□□ 0.1
SRSF1-204ENST00000581979 VEGFAP15692 232 aaPredicted RBP15.65■□□□□ 0.1
SRSF1-204ENST00000581979 FSTL1Q12841 308 aa15.65■□□□□ 0.1
SRSF1-204ENST00000581979 PPP1R42Q7Z4L9 355 aa15.65■□□□□ 0.1
SRSF1-204ENST00000581979 MYD88Q99836 296 aa15.65■□□□□ 0.1
SRSF1-204ENST00000581979 METTL22Q9BUU2 404 aaPredicted RBP15.65■□□□□ 0.1
SRSF1-204ENST00000581979 HOXA10P31260 410 aaPredicted RBP15.65■□□□□ 0.1
SRSF1-204ENST00000581979 APLP1P51693 650 aa15.65■□□□□ 0.1
SRSF1-204ENST00000581979 CWF19L2Q2TBE0 894 aaKnown RBP15.65■□□□□ 0.1
SRSF1-204ENST00000581979 DPY19L2Q6NUT2 758 aa15.65■□□□□ 0.1
SRSF1-204ENST00000581979 RTKN2Q8IZC4 609 aa15.65■□□□□ 0.1
SRSF1-204ENST00000581979 PLBD2Q8NHP8 589 aa15.65■□□□□ 0.1
SRSF1-204ENST00000581979 LRRFIP2Q9Y608 721 aaKnown RBP15.65■□□□□ 0.1
SRSF1-204ENST00000581979 WDR90Q96KV7 1748 aa15.64■□□□□ 0.09
SRSF1-204ENST00000581979 HMMRO75330 724 aa15.64■□□□□ 0.09
SRSF1-204ENST00000581979 FKBP4Q02790 459 aaKnown RBP eCLIP15.64■□□□□ 0.09
SRSF1-204ENST00000581979 TSHZ2Q9NRE2 1034 aa15.64■□□□□ 0.09
SRSF1-204ENST00000581979 C9orf78Q9NZ63 289 aaPredicted RBP15.64■□□□□ 0.09
SRSF1-204ENST00000581979 SNED1Q8TER0 1413 aa15.63■□□□□ 0.09
SRSF1-204ENST00000581979 HSP90AB3PQ58FF7 597 aa15.63■□□□□ 0.09
SRSF1-204ENST00000581979 SLC10A5Q5PT55 438 aa15.63■□□□□ 0.09
SRSF1-204ENST00000581979 POTECB2RU33 542 aa15.63■□□□□ 0.09
SRSF1-204ENST00000581979 NBPF7P0C2Y1 421 aaPredicted RBP15.63■□□□□ 0.09
SRSF1-204ENST00000581979 OLFM4Q6UX06 510 aa15.63■□□□□ 0.09
SRSF1-204ENST00000581979 UTP14AQ9BVJ6 771 aaKnown RBP15.63■□□□□ 0.09
SRSF1-204ENST00000581979 HDAC5Q9UQL6 1122 aa15.63■□□□□ 0.09
SRSF1-204ENST00000581979 ANKRD36CQ5JPF3 1778 aa15.63■□□□□ 0.09
SRSF1-204ENST00000581979 NEURL1BA8MQ27 555 aa15.62■□□□□ 0.09
SRSF1-204ENST00000581979 IGKV5-2P06315 115 aa15.62■□□□□ 0.09
SRSF1-204ENST00000581979 TCIRG1Q13488 830 aa15.62■□□□□ 0.09
SRSF1-204ENST00000581979 CC2D2BQ6DHV5 1058 aa15.62■□□□□ 0.09
SRSF1-204ENST00000581979 SMC1BQ8NDV3 1235 aa15.62■□□□□ 0.09
SRSF1-204ENST00000581979 RPGRQ92834 1020 aaKnown RBP15.62■□□□□ 0.09
SRSF1-204ENST00000581979 CRAMP1Q96RY5 1269 aa15.62■□□□□ 0.09
SRSF1-204ENST00000581979 ATP8B2P98198 1209 aa15.61■□□□□ 0.09
SRSF1-204ENST00000581979 NLRP10Q86W26 655 aa15.61■□□□□ 0.09
SRSF1-204ENST00000581979 DCTPP1Q9H773 170 aa15.61■□□□□ 0.09
SRSF1-204ENST00000581979 GRM8O00222 908 aa15.6■□□□□ 0.09
SRSF1-204ENST00000581979 NUCB1Q02818 461 aa15.6■□□□□ 0.09
SRSF1-204ENST00000581979 ANKRD45Q5TZF3 282 aa15.6■□□□□ 0.09
SRSF1-204ENST00000581979 C3orf67Q6ZVT6 689 aa15.6■□□□□ 0.09
SRSF1-204ENST00000581979 RBM17Q96I25 401 aaKnown RBP15.6■□□□□ 0.09
SRSF1-204ENST00000581979 NLRP3Q96P20 1036 aa15.6■□□□□ 0.09
SRSF1-204ENST00000581979 PSMD1Q99460 953 aa15.6■□□□□ 0.09
SRSF1-204ENST00000581979 GRIPAP1Q4V328 841 aa15.6■□□□□ 0.09
SRSF1-204ENST00000581979 CHD1LQ86WJ1 897 aa15.6■□□□□ 0.09
SRSF1-204ENST00000581979 ZNF277Q9NRM2 450 aaPredicted RBP15.6■□□□□ 0.09
SRSF1-204ENST00000581979 DDNO94850 711 aaPredicted RBP15.59■□□□□ 0.09
SRSF1-204ENST00000581979 GCKRQ14397 625 aa15.59■□□□□ 0.09
SRSF1-204ENST00000581979 DNAJC5GQ8N7S2 189 aa15.59■□□□□ 0.09
SRSF1-204ENST00000581979 LNPKQ9C0E8 428 aa15.59■□□□□ 0.09
SRSF1-204ENST00000581979 ZBTB47Q9UFB7 747 aaPredicted RBP15.59■□□□□ 0.09
SRSF1-204ENST00000581979 UTYO14607 1347 aa15.58■□□□□ 0.09
SRSF1-204ENST00000581979 PNMA6EA0A0J9YXQ4 647 aa15.58■□□□□ 0.08
SRSF1-204ENST00000581979 ATP5J2-PTCD1G3V325 749 aa15.58■□□□□ 0.08
SRSF1-204ENST00000581979 IARSP41252 1262 aaKnown RBP15.58■□□□□ 0.08
SRSF1-204ENST00000581979 SYNE4Q8N205 404 aa15.58■□□□□ 0.08
SRSF1-204ENST00000581979 L3MBTL3Q96JM7 780 aaPredicted RBP15.57■□□□□ 0.08
SRSF1-204ENST00000581979 SH3TC1Q8TE82 1336 aa15.57■□□□□ 0.08
SRSF1-204ENST00000581979 PPEF1O14829 653 aaPredicted RBP15.57■□□□□ 0.08
SRSF1-204ENST00000581979 PDE4AP27815 886 aa15.57■□□□□ 0.08
SRSF1-204ENST00000581979 ISCA1Q9BUE6 129 aa15.57■□□□□ 0.08
SRSF1-204ENST00000581979 TRMT112Q9UI30 125 aaKnown RBP15.57■□□□□ 0.08
SRSF1-204ENST00000581979 FZD9O00144 591 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms