RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 RTF1Q92541 710 aaKnown RBP17.66■□□□□ 0.42
CDK5RAP3-213ENST00000579605 DCPSQ96C86 337 aaKnown RBP17.66■□□□□ 0.42
CDK5RAP3-213ENST00000579605 NLRP3Q96P20 1036 aa17.66■□□□□ 0.42
CDK5RAP3-213ENST00000579605 ERVV-1B6SEH8 477 aa17.65■□□□□ 0.42
CDK5RAP3-213ENST00000579605 SLC10A3P09131 477 aa17.65■□□□□ 0.42
CDK5RAP3-213ENST00000579605 PRKAR2BP31323 418 aa17.65■□□□□ 0.42
CDK5RAP3-213ENST00000579605 KIAA2012Q0VF49 1180 aa17.65■□□□□ 0.42
CDK5RAP3-213ENST00000579605 DCTN1Q14203 1278 aa17.65■□□□□ 0.42
CDK5RAP3-213ENST00000579605 RTFDC1Q9BY42 306 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-213ENST00000579605 MIS18AQ9NYP9 233 aa17.65■□□□□ 0.42
CDK5RAP3-213ENST00000579605 TIMELESSQ9UNS1 1208 aa17.65■□□□□ 0.42
CDK5RAP3-213ENST00000579605 MAP3K15Q6ZN16 1313 aa17.65■□□□□ 0.42
CDK5RAP3-213ENST00000579605 RIC1Q4ADV7 1423 aa17.64■□□□□ 0.42
CDK5RAP3-213ENST00000579605 SIPA1L3O60292 1781 aaPredicted RBP17.64■□□□□ 0.41
CDK5RAP3-213ENST00000579605 YDJCA8MPS7 323 aa17.64■□□□□ 0.41
CDK5RAP3-213ENST00000579605 TBC1D8O95759 1140 aa17.64■□□□□ 0.41
CDK5RAP3-213ENST00000579605 EGFRP00533 1210 aa17.64■□□□□ 0.41
CDK5RAP3-213ENST00000579605 MYL6BP14649 208 aa17.64■□□□□ 0.41
CDK5RAP3-213ENST00000579605 PKN2Q16513 984 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP3-213ENST00000579605 NTSR2O95665 410 aa17.63■□□□□ 0.41
CDK5RAP3-213ENST00000579605 ZNF296Q8WUU4 475 aaPredicted RBP17.63■□□□□ 0.41
CDK5RAP3-213ENST00000579605 ABCC4O15439 1325 aa17.63■□□□□ 0.41
CDK5RAP3-213ENST00000579605 PPP1R42Q7Z4L9 355 aa17.62■□□□□ 0.41
CDK5RAP3-213ENST00000579605 SP8Q8IXZ3 490 aa17.62■□□□□ 0.41
CDK5RAP3-213ENST00000579605 PSMD14O00487 310 aa17.61■□□□□ 0.41
CDK5RAP3-213ENST00000579605 BBOX1O75936 387 aa17.61■□□□□ 0.41
CDK5RAP3-213ENST00000579605 ZNF34Q8IZ26 560 aa17.61■□□□□ 0.41
CDK5RAP3-213ENST00000579605 RASAL3Q86YV0 1011 aa17.6■□□□□ 0.41
CDK5RAP3-213ENST00000579605 DPF2Q92785 391 aa17.6■□□□□ 0.41
CDK5RAP3-213ENST00000579605 PCGF6Q9BYE7 350 aa17.6■□□□□ 0.41
CDK5RAP3-213ENST00000579605 RIMBP2O15034 1052 aa17.59■□□□□ 0.41
CDK5RAP3-213ENST00000579605 SULF1Q8IWU6 871 aa17.59■□□□□ 0.41
CDK5RAP3-213ENST00000579605 DBNDD1Q9H9R9 158 aa17.59■□□□□ 0.41
CDK5RAP3-213ENST00000579605 ASTN2O75129 1339 aaPredicted RBP17.58■□□□□ 0.4
CDK5RAP3-213ENST00000579605 CLSPNQ9HAW4 1339 aa17.58■□□□□ 0.4
CDK5RAP3-213ENST00000579605 TAF7Q15545 349 aaPredicted RBP17.58■□□□□ 0.4
CDK5RAP3-213ENST00000579605 REM2Q8IYK8 340 aaPredicted RBP17.58■□□□□ 0.4
CDK5RAP3-213ENST00000579605 CDCA5Q96FF9 252 aa17.58■□□□□ 0.4
CDK5RAP3-213ENST00000579605 UTP14AQ9BVJ6 771 aaKnown RBP17.58■□□□□ 0.4
CDK5RAP3-213ENST00000579605 RSPH6AQ9H0K4 717 aa17.58■□□□□ 0.4
CDK5RAP3-213ENST00000579605 KCNQ5Q9NR82 932 aa17.58■□□□□ 0.4
CDK5RAP3-213ENST00000579605 IBTKQ9P2D0 1353 aaPredicted RBP17.57■□□□□ 0.4
CDK5RAP3-213ENST00000579605 HCLS1P14317 486 aaPredicted RBP17.57■□□□□ 0.4
CDK5RAP3-213ENST00000579605 FBXO46Q6PJ61 603 aaPredicted RBP17.57■□□□□ 0.4
CDK5RAP3-213ENST00000579605 DDX46Q7L014 1031 aaKnown RBP17.57■□□□□ 0.4
CDK5RAP3-213ENST00000579605 GGA3Q9NZ52 723 aa17.57■□□□□ 0.4
CDK5RAP3-213ENST00000579605 DOK7Q18PE1 504 aa17.56■□□□□ 0.4
CDK5RAP3-213ENST00000579605 WASHC4Q2M389 1173 aa17.56■□□□□ 0.4
CDK5RAP3-213ENST00000579605 KIF4BQ2VIQ3 1234 aa17.56■□□□□ 0.4
CDK5RAP3-213ENST00000579605 PARP10Q53GL7 1025 aa17.56■□□□□ 0.4
CDK5RAP3-213ENST00000579605 SLC10A5Q5PT55 438 aa17.56■□□□□ 0.4
CDK5RAP3-213ENST00000579605 GIGYF2Q6Y7W6 1299 aaKnown RBP17.56■□□□□ 0.4
CDK5RAP3-213ENST00000579605 GPR25O00155 361 aa17.55■□□□□ 0.4
CDK5RAP3-213ENST00000579605 FXR1P51114 621 aaKnown RBP eCLIP17.55■□□□□ 0.4
CDK5RAP3-213ENST00000579605 MOB2Q70IA6 237 aa17.55■□□□□ 0.4
CDK5RAP3-213ENST00000579605 COL3A1P02461 1466 aaPredicted RBP17.55■□□□□ 0.4
CDK5RAP3-213ENST00000579605 MKRN3Q13064 507 aaKnown RBP17.54■□□□□ 0.4
CDK5RAP3-213ENST00000579605 GRAPQ13588 217 aa17.54■□□□□ 0.4
CDK5RAP3-213ENST00000579605 GRAPLQ8TC17 118 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP3-213ENST00000579605 UBE2Q2LH0YL09 131 aa17.53■□□□□ 0.4
CDK5RAP3-213ENST00000579605 C6orf229H3BNL8 230 aa17.53■□□□□ 0.4
CDK5RAP3-213ENST00000579605 RPS12P25398 132 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-213ENST00000579605 ZNF428Q96B54 188 aa17.53■□□□□ 0.4
CDK5RAP3-213ENST00000579605 THUMPD2Q9BTF0 503 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-213ENST00000579605 NSFL1CQ9UNZ2 370 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-213ENST00000579605 AKAP11Q9UKA4 1901 aa17.53■□□□□ 0.4
CDK5RAP3-213ENST00000579605 POTEFA5A3E0 1075 aa17.52■□□□□ 0.4
CDK5RAP3-213ENST00000579605 PER1O15534 1290 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP3-213ENST00000579605 ECE2O60344 883 aa17.52■□□□□ 0.4
CDK5RAP3-213ENST00000579605 U2AF1L5P0DN76 240 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP3-213ENST00000579605 U2AF1Q01081 240 aaKnown RBP eCLIP17.52■□□□□ 0.41e-8■□□□□ 9.6
CDK5RAP3-213ENST00000579605 ANGEL2Q5VTE6 544 aaKnown RBP17.52■□□□□ 0.4
CDK5RAP3-213ENST00000579605 SCAF8Q9UPN6 1271 aaKnown RBP17.52■□□□□ 0.4
CDK5RAP3-213ENST00000579605 SCARF1Q14162 830 aa17.51■□□□□ 0.39
CDK5RAP3-213ENST00000579605 NUP98P52948 1817 aa17.5■□□□□ 0.39
CDK5RAP3-213ENST00000579605 FKTNO75072 461 aa17.5■□□□□ 0.39
CDK5RAP3-213ENST00000579605 EIF4A1P60842 406 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-213ENST00000579605 TTLL12Q14166 644 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-213ENST00000579605 PRAMEF18Q5VWM3 479 aa17.5■□□□□ 0.39
CDK5RAP3-213ENST00000579605 R3HDMLQ9H3Y0 253 aa17.5■□□□□ 0.39
CDK5RAP3-213ENST00000579605 HTATSF1O43719 755 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP3-213ENST00000579605 CFAP53Q96M91 514 aa17.49■□□□□ 0.39
CDK5RAP3-213ENST00000579605 POLLQ9UGP5 575 aa17.49■□□□□ 0.39
CDK5RAP3-213ENST00000579605 TRMT112Q9UI30 125 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP3-213ENST00000579605 NUDCQ9Y266 331 aa17.49■□□□□ 0.39
CDK5RAP3-213ENST00000579605 RTL9Q8NET4 1388 aa17.49■□□□□ 0.39
CDK5RAP3-213ENST00000579605 G3V3G9 751 aa17.48■□□□□ 0.39
CDK5RAP3-213ENST00000579605 TM4SF4P48230 202 aa17.48■□□□□ 0.39
CDK5RAP3-213ENST00000579605 FKBP1BP68106 108 aa17.48■□□□□ 0.39
CDK5RAP3-213ENST00000579605 GPSM2P81274 684 aa17.48■□□□□ 0.39
CDK5RAP3-213ENST00000579605 DCAF8Q5TAQ9 597 aa17.48■□□□□ 0.39
CDK5RAP3-213ENST00000579605 PNISRQ8TF01 805 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-213ENST00000579605 ANXA1P04083 346 aa17.47■□□□□ 0.39
CDK5RAP3-213ENST00000579605 EIF2S2P20042 333 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-213ENST00000579605 COLQQ9Y215 455 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-213ENST00000579605 TRIM17Q9Y577 477 aa17.47■□□□□ 0.39
CDK5RAP3-213ENST00000579605 POLR2AP24928 1970 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-213ENST00000579605 VIL1P09327 827 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-213ENST00000579605 TMC4Q7Z404 712 aa17.46■□□□□ 0.39
CDK5RAP3-213ENST00000579605 NLRP10Q86W26 655 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms