RNA–Protein interactions for RNA: ENST00000579531.5

MSI2-211, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-211	ENST00000579531	NIF3L1	Q9GZT8	377 aa		6.29	□□□□□ -1.4
MSI2-211	ENST00000579531	KCNH4	Q9UQ05	1017 aa		6.29	□□□□□ -1.4
MSI2-211	ENST00000579531	GIPC1	O14908	333 aa		6.28	□□□□□ -1.4
MSI2-211	ENST00000579531	EFS	O43281	561 aa		6.28	□□□□□ -1.4
MSI2-211	ENST00000579531	CPNE3	O75131	537 aa	Known RBP	6.28	□□□□□ -1.4
MSI2-211	ENST00000579531	MAPK8	P45983	427 aa		6.28	□□□□□ -1.4
MSI2-211	ENST00000579531	NEUROD1	Q13562	356 aa		6.28	□□□□□ -1.4
MSI2-211	ENST00000579531	CMTR1	Q8N1G2	835 aa	Known RBP	6.28	□□□□□ -1.4
MSI2-211	ENST00000579531	CCDC155	Q8N6L0	562 aa		6.28	□□□□□ -1.4
MSI2-211	ENST00000579531	ZCCHC2	Q9C0B9	1178 aa	Known RBP	6.28	□□□□□ -1.4
MSI2-211	ENST00000579531	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	6.28	□□□□□ -1.4
MSI2-211	ENST00000579531	CUX1	P39880	1505 aa		6.28	□□□□□ -1.4
MSI2-211	ENST00000579531	XYLB	O75191	536 aa		6.27	□□□□□ -1.41
MSI2-211	ENST00000579531	XPC	Q01831	940 aa	Predicted RBP	6.27	□□□□□ -1.41
MSI2-211	ENST00000579531	FAM182B	Q5T319	152 aa		6.27	□□□□□ -1.41
MSI2-211	ENST00000579531	NLRP13	Q86W25	1043 aa		6.27	□□□□□ -1.41
MSI2-211	ENST00000579531	MRRF	Q96E11	262 aa	Known RBP	6.27	□□□□□ -1.41
MSI2-211	ENST00000579531	TRERF1	Q96PN7	1200 aa		6.27	□□□□□ -1.41
MSI2-211	ENST00000579531	CFHR5	Q9BXR6	569 aa		6.27	□□□□□ -1.41
MSI2-211	ENST00000579531	GGNBP2	Q9H3C7	697 aa		6.27	□□□□□ -1.41
MSI2-211	ENST00000579531	ELP3	Q9H9T3	547 aa		6.27	□□□□□ -1.41
MSI2-211	ENST00000579531	KCNMB2	Q9Y691	235 aa		6.27	□□□□□ -1.41
MSI2-211	ENST00000579531	IFT140	Q96RY7	1462 aa		6.27	□□□□□ -1.41
MSI2-211	ENST00000579531	SYNJ1	O43426	1573 aa		6.27	□□□□□ -1.41
MSI2-211	ENST00000579531	WRN	Q14191	1432 aa	Predicted RBP eCLIP	6.26	□□□□□ -1.41
MSI2-211	ENST00000579531	TNFRSF21	O75509	655 aa		6.26	□□□□□ -1.41
MSI2-211	ENST00000579531	ITGA6	P23229	1130 aa		6.26	□□□□□ -1.41
MSI2-211	ENST00000579531	CCIN	Q13939	588 aa		6.26	□□□□□ -1.41
MSI2-211	ENST00000579531	ABI2	Q9NYB9	513 aa	Predicted RBP	6.26	□□□□□ -1.41
MSI2-211	ENST00000579531	MARK1	Q9P0L2	795 aa		6.26	□□□□□ -1.41
MSI2-211	ENST00000579531	SPG7	Q9UQ90	795 aa		6.26	□□□□□ -1.41
MSI2-211	ENST00000579531	PBRM1	Q86U86	1689 aa		6.26	□□□□□ -1.41
MSI2-211	ENST00000579531	PNMA6F	A0A0J9YX94	578 aa		6.25	□□□□□ -1.41
MSI2-211	ENST00000579531	EIF1AY	O14602	144 aa	Known RBP	6.25	□□□□□ -1.41
MSI2-211	ENST00000579531	PHACTR2	O75167	634 aa		6.25	□□□□□ -1.41
MSI2-211	ENST00000579531	TNP2	Q05952	138 aa		6.25	□□□□□ -1.41
MSI2-211	ENST00000579531	TRIP4	Q15650	581 aa	Predicted RBP	6.25	□□□□□ -1.41
MSI2-211	ENST00000579531	TTC39B	Q5VTQ0	682 aa	Predicted RBP	6.25	□□□□□ -1.41
MSI2-211	ENST00000579531	PNMA5	Q96PV4	448 aa		6.25	□□□□□ -1.41
MSI2-211	ENST00000579531	MRS2	Q9HD23	443 aa		6.25	□□□□□ -1.41
MSI2-211	ENST00000579531	NDFIP2	Q9NV92	336 aa		6.25	□□□□□ -1.41
MSI2-211	ENST00000579531	POLA1	P09884	1462 aa	Predicted RBP	6.25	□□□□□ -1.41
MSI2-211	ENST00000579531	ABCA5	Q8WWZ7	1642 aa		6.25	□□□□□ -1.41
MSI2-211	ENST00000579531	C11orf95	C9JLR9	678 aa	Predicted RBP	6.24	□□□□□ -1.41
MSI2-211	ENST00000579531	KHNYN	O15037	678 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-211	ENST00000579531	MAP3K6	O95382	1288 aa		6.24	□□□□□ -1.41
MSI2-211	ENST00000579531	MAPT	P10636	758 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-211	ENST00000579531	GNA15	P30679	374 aa		6.24	□□□□□ -1.41
MSI2-211	ENST00000579531	SOX18	P35713	384 aa		6.24	□□□□□ -1.41
MSI2-211	ENST00000579531	UBAP2L	Q14157	1087 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-211	ENST00000579531	PCSK7	Q16549	785 aa		6.24	□□□□□ -1.41
MSI2-211	ENST00000579531		Q6ZNB5	142 aa		6.24	□□□□□ -1.41
MSI2-211	ENST00000579531	TMC4	Q7Z404	712 aa		6.24	□□□□□ -1.41
MSI2-211	ENST00000579531	NPAS3	Q8IXF0	933 aa		6.24	□□□□□ -1.41
MSI2-211	ENST00000579531	SRCIN1	Q9C0H9	1055 aa		6.24	□□□□□ -1.41
MSI2-211	ENST00000579531	GMPR2	Q9P2T1	348 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-211	ENST00000579531	DACH1	Q9UI36	760 aa		6.24	□□□□□ -1.41
MSI2-211	ENST00000579531	ABCA10	Q8WWZ4	1543 aa		6.24	□□□□□ -1.41
MSI2-211	ENST00000579531	EIF4G3	O43432	1585 aa	Known RBP	6.23	□□□□□ -1.41
MSI2-211	ENST00000579531	FGD5	Q6ZNL6	1462 aa		6.23	□□□□□ -1.41
MSI2-211	ENST00000579531	UNCX	A6NJT0	531 aa		6.23	□□□□□ -1.41
MSI2-211	ENST00000579531	SORBS3	O60504	671 aa		6.23	□□□□□ -1.41
MSI2-211	ENST00000579531	HOXD8	P13378	290 aa	Predicted RBP	6.23	□□□□□ -1.41
MSI2-211	ENST00000579531	DAB2	P98082	770 aa		6.23	□□□□□ -1.41
MSI2-211	ENST00000579531	PSMD2	Q13200	908 aa		6.23	□□□□□ -1.41
MSI2-211	ENST00000579531	DBN1	Q16643	649 aa		6.23	□□□□□ -1.41
MSI2-211	ENST00000579531	NANOS1	Q8WY41	292 aa	Known RBP	6.23	□□□□□ -1.41
MSI2-211	ENST00000579531	ZNF428	Q96B54	188 aa		6.23	□□□□□ -1.41
MSI2-211	ENST00000579531	KLRG1	Q96E93	195 aa		6.23	□□□□□ -1.41
MSI2-211	ENST00000579531	ZNF837	Q96EG3	531 aa	Predicted RBP	6.23	□□□□□ -1.41
MSI2-211	ENST00000579531	ZFYVE28	Q9HCC9	887 aa		6.23	□□□□□ -1.41
MSI2-211	ENST00000579531	NLRP2	Q9NX02	1062 aa		6.23	□□□□□ -1.41
MSI2-211	ENST00000579531	PARP2	Q9UGN5	583 aa		6.23	□□□□□ -1.41
MSI2-211	ENST00000579531	DCDC2B	A2VCK2	349 aa		6.22	□□□□□ -1.41
MSI2-211	ENST00000579531	SOBP	A7XYQ1	873 aa		6.22	□□□□□ -1.41
MSI2-211	ENST00000579531	PHF20L1	A8MW92	1017 aa		6.22	□□□□□ -1.41
MSI2-211	ENST00000579531	BNIP3L	O60238	219 aa		6.22	□□□□□ -1.41
MSI2-211	ENST00000579531	EDN3	P14138	238 aa		6.22	□□□□□ -1.41
MSI2-211	ENST00000579531	SPEM2	Q0P670	501 aa		6.22	□□□□□ -1.41
MSI2-211	ENST00000579531	ORC1	Q13415	861 aa		6.22	□□□□□ -1.41
MSI2-211	ENST00000579531	MRPL58	Q14197	206 aa	Known RBP	6.22	□□□□□ -1.41
MSI2-211	ENST00000579531	SV2A	Q7L0J3	742 aa		6.22	□□□□□ -1.41
MSI2-211	ENST00000579531	DUSP9	Q99956	384 aa	Known RBP	6.22	□□□□□ -1.41
MSI2-211	ENST00000579531	GSX2	Q9BZM3	304 aa		6.22	□□□□□ -1.41
MSI2-211	ENST00000579531	AVEN	Q9NQS1	362 aa	Predicted RBP	6.22	□□□□□ -1.41
MSI2-211	ENST00000579531	KIAA1522	Q9P206	1035 aa	Predicted RBP	6.22	□□□□□ -1.41
MSI2-211	ENST00000579531	NSFL1C	Q9UNZ2	370 aa	Known RBP	6.22	□□□□□ -1.41
MSI2-211	ENST00000579531	CUL7	Q14999	1698 aa		6.21	□□□□□ -1.42
MSI2-211	ENST00000579531	PSAP	P07602	524 aa		6.21	□□□□□ -1.42
MSI2-211	ENST00000579531	THBS1	P07996	1170 aa		6.21	□□□□□ -1.42
MSI2-211	ENST00000579531	FGFR3	P22607	806 aa		6.21	□□□□□ -1.42
MSI2-211	ENST00000579531	CES1	P23141	567 aa		6.21	□□□□□ -1.42
MSI2-211	ENST00000579531	GRN	P28799	593 aa	Known RBP	6.21	□□□□□ -1.42
MSI2-211	ENST00000579531	SFSWAP	Q12872	951 aa	Known RBP	6.21	□□□□□ -1.42
MSI2-211	ENST00000579531	GALNT12	Q8IXK2	581 aa		6.21	□□□□□ -1.42
MSI2-211	ENST00000579531	OR13H1	Q8NG92	308 aa		6.21	□□□□□ -1.42
MSI2-211	ENST00000579531	CCDC74A	Q96AQ1	378 aa		6.21	□□□□□ -1.42
MSI2-211	ENST00000579531	PPP4R2	Q9NY27	417 aa		6.21	□□□□□ -1.42
MSI2-211	ENST00000579531	TMEM63C	Q9P1W3	806 aa		6.21	□□□□□ -1.42
MSI2-211	ENST00000579531	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	6.21	□□□□□ -1.42

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