RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 GCFC2P16383 781 aaKnown RBP5.04□□□□□ -1.6
CDH8-205ENST00000577730 POLE2P56282 527 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 FAM160A1Q05DH4 1040 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 PPP1R7Q15435 360 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 CCDC65Q8IXS2 484 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 TSR2Q969E8 191 aaKnown RBP5.04□□□□□ -1.6
CDH8-205ENST00000577730 ABTB1Q969K4 478 aaPredicted RBP5.04□□□□□ -1.6
CDH8-205ENST00000577730 INTS4Q96HW7 963 aaKnown RBP5.04□□□□□ -1.6
CDH8-205ENST00000577730 TSPYL2Q9H2G4 693 aaPredicted RBP5.04□□□□□ -1.6
CDH8-205ENST00000577730 IMPACTQ9P2X3 320 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 FAF1Q9UNN5 650 aaPredicted RBP5.04□□□□□ -1.6
CDH8-205ENST00000577730 BAZ1AQ9NRL2 1556 aaPredicted RBP5.04□□□□□ -1.6
CDH8-205ENST00000577730 INTS8Q75QN2 995 aaKnown RBP5.04□□□□□ -1.6
CDH8-205ENST00000577730 SMC6Q96SB8 1091 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 NAPGQ99747 312 aaPredicted RBP5.04□□□□□ -1.6
CDH8-205ENST00000577730 TAOK3Q9H2K8 898 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 LZTFL1Q9NQ48 299 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 SATB2Q9UPW6 733 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 UBTFL1P0CB47 393 aaPredicted RBP5.04□□□□□ -1.6
CDH8-205ENST00000577730 PSMC4P43686 418 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 MUM1Q2TAK8 710 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 ZNF428Q96B54 188 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 ERICH3Q5RHP9 1530 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 ABCC8Q09428 1581 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 E7EVH7 732 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 CASQ2O14958 399 aaPredicted RBP5.04□□□□□ -1.6
CDH8-205ENST00000577730 AIMP1Q12904 312 aaKnown RBP5.04□□□□□ -1.6
CDH8-205ENST00000577730 MIER3Q7Z3K6 550 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 TANGO6Q9C0B7 1094 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 ESF1Q9H501 851 aaKnown RBP5.04□□□□□ -1.6
CDH8-205ENST00000577730 TFIP11Q9UBB9 837 aaKnown RBP5.04□□□□□ -1.6
CDH8-205ENST00000577730 CARMIL1Q5VZK9 1371 aa5.04□□□□□ -1.6
CDH8-205ENST00000577730 DIXDC1Q155Q3 683 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 CCDC57Q2TAC2 916 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 TTC22Q5TAA0 569 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 CAPRIN2Q6IMN6 1127 aaKnown RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 ZGPATQ8N5A5 531 aaKnown RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 KIF2CQ99661 725 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 RPGRIP1LQ68CZ1 1315 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 ERICH2A1L162 156 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 PPFIA2O75334 1257 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 SURF6O75683 361 aaKnown RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 FKBP15Q5T1M5 1219 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 PRPF40BQ6NWY9 871 aaKnown RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 DDX12PQ92771 950 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 PRM3Q9NNZ6 103 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 SPTLC3Q9NUV7 552 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 TRIM66O15016 1216 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 PDE1CQ14123 709 aaPredicted RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 RASEFQ8IZ41 740 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 CTAGE1Q96RT6 745 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 IFNKQ9P0W0 207 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 USH1CQ9Y6N9 552 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 CIB2O75838 187 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 HPDP32754 393 aaPredicted RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 SPTY2D1Q68D10 685 aaPredicted RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 RABGGTAQ92696 567 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 BAG1Q99933 345 aaPredicted RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 FAN1Q9Y2M0 1017 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 EVC2Q86UK5 1308 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 CYLC1P35663 651 aaPredicted RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 LONRF2Q1L5Z9 754 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 AMOTQ4VCS5 1084 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 PHLDB2Q86SQ0 1253 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 CCDC170Q8IYT3 715 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 PDLIM2Q96JY6 352 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 CAPZA3Q96KX2 299 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 RMDN2Q96LZ7 410 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 ANTXR1Q9H6X2 564 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 CHCHD3Q9NX63 227 aaKnown RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 PAIP2BQ9ULR5 123 aaKnown RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 ALDH3A1P30838 453 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 DNA2P51530 1060 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 PSMD7P51665 324 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 KRT83P78385 493 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 ATP2B2Q01814 1243 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 NUCB1Q02818 461 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 RBM26Q5T8P6 1007 aaKnown RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 SENP3Q9H4L4 574 aaPredicted RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 TTF2Q9UNY4 1162 aaKnown RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 KANK1Q14678 1352 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 KRT86O43790 486 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 GNAI2P04899 355 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 ETF1P62495 437 aaKnown RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 DNM1Q05193 864 aaKnown RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 ZFYVE27Q5T4F4 411 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 MRPS27Q92552 414 aaKnown RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 SPDL1Q96EA4 605 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 OSBPL9Q96SU4 736 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 CLSTN2Q9H4D0 955 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 CBX8Q9HC52 389 aa5.03□□□□□ -1.6
CDH8-205ENST00000577730 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.03□□□□□ -1.6
CDH8-205ENST00000577730 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.03□□□□□ -1.6
CDH8-205ENST00000577730 ARHGAP6O43182 974 aa5.02□□□□□ -1.61
CDH8-205ENST00000577730 CDKL5O76039 1030 aa5.02□□□□□ -1.61
CDH8-205ENST00000577730 NCOA1Q15788 1441 aa5.02□□□□□ -1.61
CDH8-205ENST00000577730 TWISTNBQ3B726 338 aaPredicted RBP5.02□□□□□ -1.61
CDH8-205ENST00000577730 PHLDB3Q6NSJ2 640 aa5.02□□□□□ -1.61
CDH8-205ENST00000577730 RAB3IL1Q8TBN0 382 aa5.02□□□□□ -1.61
CDH8-205ENST00000577730 ZSCAN16Q9H4T2 348 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms