RNA–Protein interactions for RNA: ENST00000575934.5

ABR-233, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-233ENST00000575934 GOLGA2Q08379 1002 aa26.43■■□□□ 1.82
ABR-233ENST00000575934 SF3B3Q15393 1217 aaKnown RBP26.43■■□□□ 1.82
ABR-233ENST00000575934 TMC4Q7Z404 712 aa26.43■■□□□ 1.82
ABR-233ENST00000575934 MPNDQ8N594 471 aa26.43■■□□□ 1.82
ABR-233ENST00000575934 COL4A1P02462 1669 aa26.43■■□□□ 1.82
ABR-233ENST00000575934 PCNTO95613 3336 aa26.43■■□□□ 1.82
ABR-233ENST00000575934 ITGBL1O95965 494 aaPredicted RBP26.42■■□□□ 1.82
ABR-233ENST00000575934 CCDC27Q2M243 656 aa26.42■■□□□ 1.82
ABR-233ENST00000575934 DPP8Q6V1X1 898 aaPredicted RBP26.42■■□□□ 1.82
ABR-233ENST00000575934 RIC3Q7Z5B4 369 aa26.42■■□□□ 1.82
ABR-233ENST00000575934 SCNN1DP51172 638 aa26.41■■□□□ 1.82
ABR-233ENST00000575934 CHMP4AQ9BY43 222 aa26.4■■□□□ 1.82
ABR-233ENST00000575934 CLEC11AQ9Y240 323 aa26.4■■□□□ 1.82
ABR-233ENST00000575934 CACNA1FO60840 1977 aa26.4■■□□□ 1.82
ABR-233ENST00000575934 LMOD1P29536 600 aaPredicted RBP26.39■■□□□ 1.82
ABR-233ENST00000575934 KIAA2012Q0VF49 1180 aa26.39■■□□□ 1.82
ABR-233ENST00000575934 CCDC30Q5VVM6 783 aa26.39■■□□□ 1.82
ABR-233ENST00000575934 TSPYL6Q8N831 410 aa26.39■■□□□ 1.82
ABR-233ENST00000575934 IRS4O14654 1257 aaPredicted RBP26.38■■□□□ 1.81
ABR-233ENST00000575934 ZBTB38Q8NAP3 1195 aaPredicted RBP26.38■■□□□ 1.81
ABR-233ENST00000575934 ZNRF3Q9ULT6 936 aa26.38■■□□□ 1.81
ABR-233ENST00000575934 MYH3P11055 1940 aa26.37■■□□□ 1.81
ABR-233ENST00000575934 TRPM7Q96QT4 1865 aa26.37■■□□□ 1.81
ABR-233ENST00000575934 EPS15P42566 896 aa26.37■■□□□ 1.81
ABR-233ENST00000575934 RTL5Q5HYW3 569 aaPredicted RBP26.37■■□□□ 1.81
ABR-233ENST00000575934 WWC1Q8IX03 1113 aa26.37■■□□□ 1.81
ABR-233ENST00000575934 CELF1Q92879 486 aaKnown RBP26.37■■□□□ 1.81
ABR-233ENST00000575934 TSR2Q969E8 191 aaKnown RBP26.37■■□□□ 1.81
ABR-233ENST00000575934 MYD88Q99836 296 aa26.37■■□□□ 1.81
ABR-233ENST00000575934 CXCL9Q07325 125 aa26.36■■□□□ 1.81
ABR-233ENST00000575934 NCBP3Q53F19 620 aaKnown RBP26.36■■□□□ 1.81
ABR-233ENST00000575934 ZNF316A6NFI3 1004 aaPredicted RBP26.35■■□□□ 1.81
ABR-233ENST00000575934 MAP1SQ66K74 1059 aaPredicted RBP26.35■■□□□ 1.81
ABR-233ENST00000575934 CNTROBQ8N137 903 aa26.35■■□□□ 1.81
ABR-233ENST00000575934 CCDC191Q8NCU4 936 aa26.35■■□□□ 1.81
ABR-233ENST00000575934 MRS2Q9HD23 443 aa26.35■■□□□ 1.81
ABR-233ENST00000575934 DDX58O95786 925 aaKnown RBP26.34■■□□□ 1.81
ABR-233ENST00000575934 METTL22Q9BUU2 404 aaPredicted RBP26.34■■□□□ 1.81
ABR-233ENST00000575934 CNTNAP1P78357 1384 aa26.33■■□□□ 1.81
ABR-233ENST00000575934 TMEM88BA6NKF7 163 aa26.33■■□□□ 1.81
ABR-233ENST00000575934 ANP32CO43423 234 aa26.33■■□□□ 1.81
ABR-233ENST00000575934 PCCAP05165 728 aaPredicted RBP26.33■■□□□ 1.81
ABR-233ENST00000575934 MKRN1Q9UHC7 482 aaKnown RBP26.33■■□□□ 1.81
ABR-233ENST00000575934 IL16Q14005 1332 aa26.33■■□□□ 1.81
ABR-233ENST00000575934 HSP90B1P14625 803 aaKnown RBP26.32■■□□□ 1.8
ABR-233ENST00000575934 USP50Q70EL3 339 aaPredicted RBP26.32■■□□□ 1.8
ABR-233ENST00000575934 GPRC5DQ9NZD1 345 aa26.32■■□□□ 1.8
ABR-233ENST00000575934 CIAPIN1Q6FI81 312 aa26.31■■□□□ 1.8
ABR-233ENST00000575934 CWC25Q9NXE8 425 aaPredicted RBP26.31■■□□□ 1.8
ABR-233ENST00000575934 CDHR2Q9BYE9 1310 aa26.31■■□□□ 1.8
ABR-233ENST00000575934 HSPA1AP0DMV8 641 aaKnown RBP26.3■■□□□ 1.8
ABR-233ENST00000575934 HSPA1BP0DMV9 641 aaKnown RBP26.3■■□□□ 1.8
ABR-233ENST00000575934 NSFL1CQ9UNZ2 370 aaKnown RBP26.3■■□□□ 1.8
ABR-233ENST00000575934 MAP3K2Q9Y2U5 619 aa26.3■■□□□ 1.8
ABR-233ENST00000575934 YDJCA8MPS7 323 aa26.29■■□□□ 1.8
ABR-233ENST00000575934 RPS8P62241 208 aaKnown RBP26.29■■□□□ 1.8
ABR-233ENST00000575934 TWISTNBQ3B726 338 aaPredicted RBP26.29■■□□□ 1.8
ABR-233ENST00000575934 KSR2Q6VAB6 950 aa26.29■■□□□ 1.8
ABR-233ENST00000575934 STK31Q9BXU1 1019 aa26.29■■□□□ 1.8
ABR-233ENST00000575934 ADARB2Q9NS39 739 aaKnown RBP26.29■■□□□ 1.8
ABR-233ENST00000575934 GMPSP49915 693 aaPredicted RBP26.28■■□□□ 1.8
ABR-233ENST00000575934 GPSM2P81274 684 aa26.28■■□□□ 1.8
ABR-233ENST00000575934 WASHC4Q2M389 1173 aa26.28■■□□□ 1.8
ABR-233ENST00000575934 SCN9AQ15858 1988 aa26.27■■□□□ 1.8
ABR-233ENST00000575934 PI4KAP2A4QPH2 592 aa26.27■■□□□ 1.8
ABR-233ENST00000575934 PDE8AO60658 829 aa26.27■■□□□ 1.8
ABR-233ENST00000575934 RAD17O75943 681 aa26.27■■□□□ 1.8
ABR-233ENST00000575934 TNIP1Q15025 636 aa26.27■■□□□ 1.8
ABR-233ENST00000575934 PI4KAP1Q8N8J0 262 aa26.27■■□□□ 1.8
ABR-233ENST00000575934 SEC31BQ9NQW1 1179 aa26.27■■□□□ 1.8
ABR-233ENST00000575934 POLLQ9UGP5 575 aa26.27■■□□□ 1.8
ABR-233ENST00000575934 SPEF2Q9C093 1822 aa26.27■■□□□ 1.8
ABR-233ENST00000575934 IGKV5-2P06315 115 aa26.26■■□□□ 1.79
ABR-233ENST00000575934 CCDC152Q4G0S7 254 aa26.26■■□□□ 1.79
ABR-233ENST00000575934 JARID2Q92833 1246 aaPredicted RBP26.26■■□□□ 1.79
ABR-233ENST00000575934 PSME4Q14997 1843 aa26.25■■□□□ 1.79
ABR-233ENST00000575934 COL13A1Q5TAT6 717 aaPredicted RBP26.25■■□□□ 1.79
ABR-233ENST00000575934 FANCIQ9NVI1 1328 aa26.24■■□□□ 1.79
ABR-233ENST00000575934 C6orf229H3BNL8 230 aa26.24■■□□□ 1.79
ABR-233ENST00000575934 G2E3Q7L622 706 aa26.24■■□□□ 1.79
ABR-233ENST00000575934 TBC1D16Q8TBP0 767 aa26.24■■□□□ 1.79
ABR-233ENST00000575934 BCL2L13Q9BXK5 485 aa26.24■■□□□ 1.79
ABR-233ENST00000575934 DBNDD1Q9H9R9 158 aa26.24■■□□□ 1.79
ABR-233ENST00000575934 PODXL2Q9NZ53 605 aa26.24■■□□□ 1.79
ABR-233ENST00000575934 RASSF10A6NK89 507 aa26.23■■□□□ 1.79
ABR-233ENST00000575934 EYA3Q99504 573 aa26.23■■□□□ 1.79
ABR-233ENST00000575934 POLR2AP24928 1970 aaKnown RBP26.22■■□□□ 1.79
ABR-233ENST00000575934 RIMBP2O15034 1052 aa26.22■■□□□ 1.79
ABR-233ENST00000575934 SLC4A2P04920 1241 aa26.22■■□□□ 1.79
ABR-233ENST00000575934 VEGFBP49765 207 aa26.22■■□□□ 1.79
ABR-233ENST00000575934 NEXNQ0ZGT2 675 aa26.22■■□□□ 1.79
ABR-233ENST00000575934 WDR63Q8IWG1 891 aa26.22■■□□□ 1.79
ABR-233ENST00000575934 FMR1Q06787 632 aaKnown RBP eCLIP26.21■■□□□ 1.79
ABR-233ENST00000575934 NEURL1BA8MQ27 555 aa26.2■■□□□ 1.78
ABR-233ENST00000575934 PSMD14O00487 310 aa26.2■■□□□ 1.78
ABR-233ENST00000575934 ECE2O60344 883 aa26.2■■□□□ 1.78
ABR-233ENST00000575934 CCDC85AQ96PX6 553 aaPredicted RBP26.2■■□□□ 1.78
ABR-233ENST00000575934 PGAP2Q9UHJ9 254 aa26.2■■□□□ 1.78
ABR-233ENST00000575934 CNOT7Q9UIV1 285 aaKnown RBP26.2■■□□□ 1.78
ABR-233ENST00000575934 THSD7BQ9C0I4 1608 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms