RNA–Protein interactions for RNA: ENST00000572298.5

TOM1L1-211, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-211ENST00000572298 BCAR3O75815 825 aa11.28□□□□□ -0.6
TOM1L1-211ENST00000572298 YBX3P16989 372 aaKnown RBP eCLIP11.28□□□□□ -0.6
TOM1L1-211ENST00000572298 PRPF40BQ6NWY9 871 aaKnown RBP11.28□□□□□ -0.6
TOM1L1-211ENST00000572298 ATF7IPQ6VMQ6 1270 aa11.28□□□□□ -0.6
TOM1L1-211ENST00000572298 UBE3BQ7Z3V4 1068 aa11.28□□□□□ -0.6
TOM1L1-211ENST00000572298 TMC4Q7Z404 712 aa11.28□□□□□ -0.6
TOM1L1-211ENST00000572298 PLA2G12BQ9BX93 195 aa11.28□□□□□ -0.6
TOM1L1-211ENST00000572298 N4BP2Q86UW6 1770 aaPredicted RBP11.28□□□□□ -0.6
TOM1L1-211ENST00000572298 ARHGAP27Q6ZUM4 889 aa11.27□□□□□ -0.61
TOM1L1-211ENST00000572298 SYNE4Q8N205 404 aa11.27□□□□□ -0.61
TOM1L1-211ENST00000572298 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.27□□□□□ -0.61
TOM1L1-211ENST00000572298 RCAN3Q9UKA8 241 aa11.27□□□□□ -0.61
TOM1L1-211ENST00000572298 WWC3Q9ULE0 1092 aa11.27□□□□□ -0.61
TOM1L1-211ENST00000572298 ANKRD31Q8N7Z5 1873 aa11.26□□□□□ -0.61
TOM1L1-211ENST00000572298 GRAPQ13588 217 aa11.26□□□□□ -0.61
TOM1L1-211ENST00000572298 FTSJ3Q8IY81 847 aaKnown RBP11.26□□□□□ -0.61
TOM1L1-211ENST00000572298 RTKN2Q8IZC4 609 aa11.26□□□□□ -0.61
TOM1L1-211ENST00000572298 GRAPLQ8TC17 118 aaPredicted RBP11.26□□□□□ -0.61
TOM1L1-211ENST00000572298 C21orf2O43822 256 aa11.25□□□□□ -0.61
TOM1L1-211ENST00000572298 CASP7P55210 303 aa11.25□□□□□ -0.61
TOM1L1-211ENST00000572298 CTSWP56202 376 aa11.25□□□□□ -0.61
TOM1L1-211ENST00000572298 CCDC93Q567U6 631 aa11.25□□□□□ -0.61
TOM1L1-211ENST00000572298 INTS3Q68E01 1043 aaKnown RBP11.25□□□□□ -0.61
TOM1L1-211ENST00000572298 CDC5LQ99459 802 aaKnown RBP11.25□□□□□ -0.61
TOM1L1-211ENST00000572298 KIAA1551Q9HCM1 1747 aa11.25□□□□□ -0.61
TOM1L1-211ENST00000572298 UTYO14607 1347 aa11.25□□□□□ -0.61
TOM1L1-211ENST00000572298 DLEC1Q9Y238 1755 aa11.24□□□□□ -0.61
TOM1L1-211ENST00000572298 BRCA1P38398 1863 aaKnown RBP11.24□□□□□ -0.61
TOM1L1-211ENST00000572298 PPEF1O14829 653 aaPredicted RBP11.24□□□□□ -0.61
TOM1L1-211ENST00000572298 GNAI3P08754 354 aa11.24□□□□□ -0.61
TOM1L1-211ENST00000572298 TRIM27P14373 513 aa11.24□□□□□ -0.61
TOM1L1-211ENST00000572298 RPS8P62241 208 aaKnown RBP11.24□□□□□ -0.61
TOM1L1-211ENST00000572298 C3orf67Q6ZVT6 689 aa11.24□□□□□ -0.61
TOM1L1-211ENST00000572298 DZIP1LQ8IYY4 767 aaKnown RBP11.24□□□□□ -0.61
TOM1L1-211ENST00000572298 TTLL11Q8NHH1 800 aa11.24□□□□□ -0.61
TOM1L1-211ENST00000572298 C7orf43Q8WVR3 580 aa11.24□□□□□ -0.61
TOM1L1-211ENST00000572298 JARID2Q92833 1246 aaPredicted RBP11.24□□□□□ -0.61
TOM1L1-211ENST00000572298 ABCC4O15439 1325 aa11.24□□□□□ -0.61
TOM1L1-211ENST00000572298 CSF1RP07333 972 aa11.23□□□□□ -0.61
TOM1L1-211ENST00000572298 UBTFL1P0CB47 393 aaPredicted RBP11.23□□□□□ -0.61
TOM1L1-211ENST00000572298 ANKRD18AQ8IVF6 992 aa11.23□□□□□ -0.61
TOM1L1-211ENST00000572298 SP8Q8IXZ3 490 aa11.23□□□□□ -0.61
TOM1L1-211ENST00000572298 USP44Q9H0E7 712 aa11.23□□□□□ -0.61
TOM1L1-211ENST00000572298 CHMP4BQ9H444 224 aaKnown RBP11.23□□□□□ -0.61
TOM1L1-211ENST00000572298 ATP6V0A2Q9Y487 856 aa11.23□□□□□ -0.61
TOM1L1-211ENST00000572298 RTL9Q8NET4 1388 aa11.23□□□□□ -0.61
TOM1L1-211ENST00000572298 ARFGEF1Q9Y6D6 1849 aa11.23□□□□□ -0.61
TOM1L1-211ENST00000572298 ANKRD18BA2A2Z9 1011 aa11.22□□□□□ -0.61
TOM1L1-211ENST00000572298 IGHMBP2P38935 993 aaKnown RBP11.22□□□□□ -0.61
TOM1L1-211ENST00000572298 IFIT5Q13325 482 aaKnown RBP11.22□□□□□ -0.61
TOM1L1-211ENST00000572298 GOLGB1Q14789 3259 aaKnown RBP11.22□□□□□ -0.61
TOM1L1-211ENST00000572298 CCDC57Q2TAC2 916 aa11.22□□□□□ -0.61
TOM1L1-211ENST00000572298 SUPT20HQ8NEM7 779 aa11.22□□□□□ -0.61
TOM1L1-211ENST00000572298 CLUAP1Q96AJ1 413 aa11.22□□□□□ -0.61
TOM1L1-211ENST00000572298 TAOK3Q9H2K8 898 aa11.22□□□□□ -0.61
TOM1L1-211ENST00000572298 LTBP3Q9NS15 1303 aa11.22□□□□□ -0.61
TOM1L1-211ENST00000572298 NBPF7P0C2Y1 421 aaPredicted RBP11.21□□□□□ -0.61
TOM1L1-211ENST00000572298 LMNB1P20700 586 aa11.21□□□□□ -0.61
TOM1L1-211ENST00000572298 ITGA6P23229 1130 aa11.21□□□□□ -0.61
TOM1L1-211ENST00000572298 FOXO4P98177 505 aa11.21□□□□□ -0.61
TOM1L1-211ENST00000572298 FKBP4Q02790 459 aaKnown RBP eCLIP11.21□□□□□ -0.61
TOM1L1-211ENST00000572298 TAF7LQ5H9L4 462 aa11.21□□□□□ -0.61
TOM1L1-211ENST00000572298 LMBR1LQ6UX01 489 aa11.21□□□□□ -0.61
TOM1L1-211ENST00000572298 PSMD1Q99460 953 aa11.21□□□□□ -0.61
TOM1L1-211ENST00000572298 MPHOSPH8Q99549 860 aa11.21□□□□□ -0.61
TOM1L1-211ENST00000572298 VPS33BQ9H267 617 aa11.21□□□□□ -0.61
TOM1L1-211ENST00000572298 GREM2Q9H772 168 aa11.21□□□□□ -0.61
TOM1L1-211ENST00000572298 CHMP3Q9Y3E7 222 aa11.21□□□□□ -0.61
TOM1L1-211ENST00000572298 SLX4Q8IY92 1834 aa11.21□□□□□ -0.62
TOM1L1-211ENST00000572298 LAMB2P55268 1798 aa11.21□□□□□ -0.62
TOM1L1-211ENST00000572298 COL11A2P13942 1736 aaPredicted RBP11.21□□□□□ -0.62
TOM1L1-211ENST00000572298 DDX60Q8IY21 1712 aaKnown RBP11.21□□□□□ -0.62
TOM1L1-211ENST00000572298 TNRC6CQ9HCJ0 1690 aaKnown RBP11.2□□□□□ -0.62
TOM1L1-211ENST00000572298 DPP8Q6V1X1 898 aaPredicted RBP11.2□□□□□ -0.62
TOM1L1-211ENST00000572298 MPNDQ8N594 471 aa11.2□□□□□ -0.62
TOM1L1-211ENST00000572298 CELF1Q92879 486 aaKnown RBP11.2□□□□□ -0.62
TOM1L1-211ENST00000572298 SUCLG2Q96I99 432 aa11.2□□□□□ -0.62
TOM1L1-211ENST00000572298 CCDC85AQ96PX6 553 aaPredicted RBP11.2□□□□□ -0.62
TOM1L1-211ENST00000572298 BSDC1Q9NW68 430 aaPredicted RBP11.2□□□□□ -0.62
TOM1L1-211ENST00000572298 MYH3P11055 1940 aa11.19□□□□□ -0.62
TOM1L1-211ENST00000572298 CHD4Q14839 1912 aa11.19□□□□□ -0.62
TOM1L1-211ENST00000572298 ZC3H4Q9UPT8 1303 aaKnown RBP11.19□□□□□ -0.62
TOM1L1-211ENST00000572298 PDE3AQ14432 1141 aa11.19□□□□□ -0.62
TOM1L1-211ENST00000572298 RABL6Q3YEC7 729 aaPredicted RBP11.19□□□□□ -0.62
TOM1L1-211ENST00000572298 ITPRIPQ8IWB1 547 aa11.19□□□□□ -0.62
TOM1L1-211ENST00000572298 TMEM57Q8N5G2 664 aa11.19□□□□□ -0.62
TOM1L1-211ENST00000572298 BICC1Q9H694 974 aaKnown RBP11.19□□□□□ -0.62
TOM1L1-211ENST00000572298 SEC31BQ9NQW1 1179 aa11.19□□□□□ -0.62
TOM1L1-211ENST00000572298 NFKBIEO00221 500 aa11.18□□□□□ -0.62
TOM1L1-211ENST00000572298 GNAI2P04899 355 aa11.18□□□□□ -0.62
TOM1L1-211ENST00000572298 YY1P25490 414 aa11.18□□□□□ -0.62
TOM1L1-211ENST00000572298 FAM161AQ3B820 660 aa11.18□□□□□ -0.62
TOM1L1-211ENST00000572298 C9orf131Q5VYM1 1079 aa11.18□□□□□ -0.62
TOM1L1-211ENST00000572298 RTFDC1Q9BY42 306 aaPredicted RBP11.18□□□□□ -0.62
TOM1L1-211ENST00000572298 ANKRD2Q9GZV1 360 aa11.18□□□□□ -0.62
TOM1L1-211ENST00000572298 RNF181Q9P0P0 153 aa11.18□□□□□ -0.62
TOM1L1-211ENST00000572298 ANKIB1Q9P2G1 1089 aa11.18□□□□□ -0.62
TOM1L1-211ENST00000572298 NSFL1CQ9UNZ2 370 aaKnown RBP11.18□□□□□ -0.62
TOM1L1-211ENST00000572298 UTRNP46939 3433 aa11.18□□□□□ -0.62
TOM1L1-211ENST00000572298 EPHA10Q5JZY3 1008 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms