RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 PGBD1Q96JS3 809 aa20.67■□□□□ 0.9
SCARF1-205ENST00000571272 PXDNQ92626 1479 aa20.67■□□□□ 0.9
SCARF1-205ENST00000571272 IGKV5-2P06315 115 aa20.67■□□□□ 0.9
SCARF1-205ENST00000571272 DNAJC25Q9H1X3 360 aa20.67■□□□□ 0.9
SCARF1-205ENST00000571272 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.66■□□□□ 0.9
SCARF1-205ENST00000571272 MYL6BP14649 208 aa20.66■□□□□ 0.9
SCARF1-205ENST00000571272 SNRKQ9NRH2 765 aa20.66■□□□□ 0.9
SCARF1-205ENST00000571272 MED23Q9ULK4 1368 aa20.66■□□□□ 0.9
SCARF1-205ENST00000571272 ARHGAP23Q9P227 1491 aa20.66■□□□□ 0.9
SCARF1-205ENST00000571272 TAF5LO75529 589 aa20.66■□□□□ 0.9
SCARF1-205ENST00000571272 DDX58O95786 925 aaKnown RBP20.66■□□□□ 0.9
SCARF1-205ENST00000571272 CEBPZQ03701 1054 aaKnown RBP20.66■□□□□ 0.9
SCARF1-205ENST00000571272 ESCO1Q5FWF5 840 aa20.66■□□□□ 0.9
SCARF1-205ENST00000571272 CLSTN2Q9H4D0 955 aa20.66■□□□□ 0.9
SCARF1-205ENST00000571272 DDX19AQ9NUU7 478 aaKnown RBP20.66■□□□□ 0.9
SCARF1-205ENST00000571272 RGPD2P0DJD1 1756 aa20.66■□□□□ 0.9
SCARF1-205ENST00000571272 PDIA4P13667 645 aaKnown RBP20.65■□□□□ 0.9
SCARF1-205ENST00000571272 ATP2B3Q16720 1220 aa20.65■□□□□ 0.9
SCARF1-205ENST00000571272 AMOTQ4VCS5 1084 aa20.65■□□□□ 0.9
SCARF1-205ENST00000571272 EPHA10Q5JZY3 1008 aa20.65■□□□□ 0.9
SCARF1-205ENST00000571272 SLIT1O75093 1534 aa20.65■□□□□ 0.9
SCARF1-205ENST00000571272 ZNF165P49910 485 aa20.65■□□□□ 0.9
SCARF1-205ENST00000571272 CCDC129Q6ZRS4 1044 aa20.65■□□□□ 0.9
SCARF1-205ENST00000571272 BRF1Q92994 677 aa20.65■□□□□ 0.9
SCARF1-205ENST00000571272 C16orf45Q96MC5 204 aaPredicted RBP20.65■□□□□ 0.9
SCARF1-205ENST00000571272 LRRC2Q9BYS8 371 aa20.65■□□□□ 0.9
SCARF1-205ENST00000571272 HSP90B1P14625 803 aaKnown RBP20.64■□□□□ 0.9
SCARF1-205ENST00000571272 LMOD2Q6P5Q4 547 aa20.64■□□□□ 0.9
SCARF1-205ENST00000571272 FOSBP53539 338 aa20.64■□□□□ 0.89
SCARF1-205ENST00000571272 SLC39A6Q13433 755 aa20.64■□□□□ 0.89
SCARF1-205ENST00000571272 DDX21Q9NR30 783 aaKnown RBP eCLIP20.64■□□□□ 0.89
SCARF1-205ENST00000571272 ZNF75DP51815 510 aa20.64■□□□□ 0.89
SCARF1-205ENST00000571272 PDCL2Q8N4E4 241 aa20.64■□□□□ 0.89
SCARF1-205ENST00000571272 H3BQV1 296 aa20.63■□□□□ 0.89
SCARF1-205ENST00000571272 PDIA6Q15084 440 aa20.63■□□□□ 0.89
SCARF1-205ENST00000571272 IFFO2Q5TF58 517 aa20.63■□□□□ 0.89
SCARF1-205ENST00000571272 SEC62Q99442 399 aaKnown RBP20.63■□□□□ 0.89
SCARF1-205ENST00000571272 HMG20BQ9P0W2 317 aa20.63■□□□□ 0.89
SCARF1-205ENST00000571272 UTYO14607 1347 aa20.63■□□□□ 0.89
SCARF1-205ENST00000571272 SPDYE4A6NLX3 237 aa20.63■□□□□ 0.89
SCARF1-205ENST00000571272 Q6ZUG5 572 aa20.63■□□□□ 0.89
SCARF1-205ENST00000571272 KCNH5Q8NCM2 988 aa20.63■□□□□ 0.89
SCARF1-205ENST00000571272 GTF3C6Q969F1 213 aa20.63■□□□□ 0.89
SCARF1-205ENST00000571272 NEK1Q96PY6 1258 aa20.63■□□□□ 0.89
SCARF1-205ENST00000571272 CCDC9Q9Y3X0 531 aaKnown RBP20.63■□□□□ 0.89
SCARF1-205ENST00000571272 COL15A1P39059 1388 aa20.62■□□□□ 0.89
SCARF1-205ENST00000571272 DNAJC2Q99543 621 aaKnown RBP20.62■□□□□ 0.89
SCARF1-205ENST00000571272 ALDH8A1Q9H2A2 487 aaPredicted RBP20.62■□□□□ 0.89
SCARF1-205ENST00000571272 HEG1Q9ULI3 1381 aa20.61■□□□□ 0.89
SCARF1-205ENST00000571272 ZSCAN25Q6NSZ9 544 aa20.61■□□□□ 0.89
SCARF1-205ENST00000571272 RBM43Q6ZSC3 357 aaKnown RBP20.61■□□□□ 0.89
SCARF1-205ENST00000571272 PLA2G4DQ86XP0 818 aa20.61■□□□□ 0.89
SCARF1-205ENST00000571272 MYD88Q99836 296 aa20.61■□□□□ 0.89
SCARF1-205ENST00000571272 DBNLQ9UJU6 430 aaKnown RBP20.61■□□□□ 0.89
SCARF1-205ENST00000571272 CHD2O14647 1828 aaKnown RBP20.61■□□□□ 0.89
SCARF1-205ENST00000571272 NFAT5O94916 1531 aa20.61■□□□□ 0.89
SCARF1-205ENST00000571272 PIP4K2AP48426 406 aaPredicted RBP20.61■□□□□ 0.89
SCARF1-205ENST00000571272 RESTQ13127 1097 aa20.61■□□□□ 0.89
SCARF1-205ENST00000571272 NEURL1BA8MQ27 555 aa20.6■□□□□ 0.89
SCARF1-205ENST00000571272 NEXNQ0ZGT2 675 aa20.6■□□□□ 0.89
SCARF1-205ENST00000571272 TSGA10IPQ3SY00 556 aa20.6■□□□□ 0.89
SCARF1-205ENST00000571272 TDRD7Q8NHU6 1098 aaKnown RBP20.6■□□□□ 0.89
SCARF1-205ENST00000571272 ANKRD24Q8TF21 1146 aa20.6■□□□□ 0.89
SCARF1-205ENST00000571272 CLIP2Q9UDT6 1046 aa20.6■□□□□ 0.89
SCARF1-205ENST00000571272 PPFIA3O75145 1194 aa20.6■□□□□ 0.89
SCARF1-205ENST00000571272 FGD1P98174 961 aa20.6■□□□□ 0.89
SCARF1-205ENST00000571272 GCP02774 474 aa20.6■□□□□ 0.89
SCARF1-205ENST00000571272 TFCP2Q12800 502 aa20.6■□□□□ 0.89
SCARF1-205ENST00000571272 GCKRQ14397 625 aa20.6■□□□□ 0.89
SCARF1-205ENST00000571272 XAGE3Q8WTP9 111 aa20.6■□□□□ 0.89
SCARF1-205ENST00000571272 BCL11BQ9C0K0 894 aaPredicted RBP20.6■□□□□ 0.89
SCARF1-205ENST00000571272 ZHX1Q9UKY1 873 aaPredicted RBP20.6■□□□□ 0.89
SCARF1-205ENST00000571272 ZSCAN20P17040 1043 aaPredicted RBP20.59■□□□□ 0.89
SCARF1-205ENST00000571272 U2AF2P26368 475 aaKnown RBP eCLIP20.59■□□□□ 0.89
SCARF1-205ENST00000571272 CCDC144BQ3MJ40 725 aa20.59■□□□□ 0.89
SCARF1-205ENST00000571272 COPS6Q7L5N1 327 aa20.59■□□□□ 0.89
SCARF1-205ENST00000571272 CCDC144CPQ8IYA2 1237 aa20.59■□□□□ 0.89
SCARF1-205ENST00000571272 FTOQ9C0B1 505 aaKnown RBP eCLIP20.59■□□□□ 0.89
SCARF1-205ENST00000571272 LMO7Q8WWI1 1683 aa20.59■□□□□ 0.89
SCARF1-205ENST00000571272 CYP21A2P08686 494 aa20.59■□□□□ 0.89
SCARF1-205ENST00000571272 KRT32Q14532 448 aa20.59■□□□□ 0.89
SCARF1-205ENST00000571272 USPL1Q5W0Q7 1092 aa20.59■□□□□ 0.89
SCARF1-205ENST00000571272 CACTINQ8WUQ7 758 aaKnown RBP20.59■□□□□ 0.89
SCARF1-205ENST00000571272 A0A087WWV3 80 aa20.58■□□□□ 0.89
SCARF1-205ENST00000571272 USP54Q70EL1 1684 aa20.58■□□□□ 0.89
SCARF1-205ENST00000571272 CTIFO43310 598 aaKnown RBP20.58■□□□□ 0.88
SCARF1-205ENST00000571272 TNNT1P13805 278 aa20.58■□□□□ 0.88
SCARF1-205ENST00000571272 SCRN1Q12765 414 aa20.58■□□□□ 0.88
SCARF1-205ENST00000571272 DDX46Q7L014 1031 aaKnown RBP20.58■□□□□ 0.88
SCARF1-205ENST00000571272 AXIN2Q9Y2T1 843 aa20.57■□□□□ 0.88
SCARF1-205ENST00000571272 KIF13AQ9H1H9 1805 aa20.57■□□□□ 0.88
SCARF1-205ENST00000571272 TNNI3KQ59H18 835 aa20.57■□□□□ 0.88
SCARF1-205ENST00000571272 ANKRD7Q92527 254 aa20.57■□□□□ 0.88
SCARF1-205ENST00000571272 FPGT-TNNI3KV9GXZ4 949 aa20.57■□□□□ 0.88
SCARF1-205ENST00000571272 JCADQ9P266 1359 aa20.57■□□□□ 0.88
SCARF1-205ENST00000571272 ATP5JP18859 108 aa20.56■□□□□ 0.88
SCARF1-205ENST00000571272 ARHGEF25Q86VW2 580 aa20.56■□□□□ 0.88
SCARF1-205ENST00000571272 DBNDD2Q9BQY9 259 aa20.56■□□□□ 0.88
SCARF1-205ENST00000571272 ADGRL3Q9HAR2 1447 aa20.56■□□□□ 0.88
SCARF1-205ENST00000571272 SLFNL1Q499Z3 407 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms