RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 NMRK2Q9NPI5 230 aa12.5□□□□□ -0.41
GTF3C1-212ENST00000570129 DDX60Q8IY21 1712 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-212ENST00000570129 RIC1Q4ADV7 1423 aa12.49□□□□□ -0.41
GTF3C1-212ENST00000570129 PDE8AO60658 829 aa12.49□□□□□ -0.41
GTF3C1-212ENST00000570129 LMNB1P20700 586 aa12.49□□□□□ -0.41
GTF3C1-212ENST00000570129 CTSWP56202 376 aa12.49□□□□□ -0.41
GTF3C1-212ENST00000570129 GRAPQ13588 217 aa12.49□□□□□ -0.41
GTF3C1-212ENST00000570129 CCDC93Q567U6 631 aa12.49□□□□□ -0.41
GTF3C1-212ENST00000570129 GRAPLQ8TC17 118 aaPredicted RBP12.49□□□□□ -0.41
GTF3C1-212ENST00000570129 SUCLG2Q96I99 432 aa12.49□□□□□ -0.41
GTF3C1-212ENST00000570129 YTHDC1Q96MU7 727 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-212ENST00000570129 CHMP4AQ9BY43 222 aa12.49□□□□□ -0.41
GTF3C1-212ENST00000570129 ATP6V0A2Q9Y487 856 aa12.49□□□□□ -0.41
GTF3C1-212ENST00000570129 CACNA1SQ13698 1873 aa12.48□□□□□ -0.41
GTF3C1-212ENST00000570129 LAMB2P55268 1798 aa12.48□□□□□ -0.41
GTF3C1-212ENST00000570129 RNF123Q5XPI4 1314 aa12.48□□□□□ -0.41
GTF3C1-212ENST00000570129 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
GTF3C1-212ENST00000570129 SNAP23O00161 211 aa12.48□□□□□ -0.41
GTF3C1-212ENST00000570129 FKBP4Q02790 459 aaKnown RBP eCLIP12.48□□□□□ -0.41
GTF3C1-212ENST00000570129 ALDH1L2Q3SY69 923 aa12.48□□□□□ -0.41
GTF3C1-212ENST00000570129 ZNF594Q96JF6 807 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-212ENST00000570129 TAOK3Q9H2K8 898 aa12.48□□□□□ -0.41
GTF3C1-212ENST00000570129 ARFGEF1Q9Y6D6 1849 aa12.48□□□□□ -0.41
GTF3C1-212ENST00000570129 CDHR2Q9BYE9 1310 aa12.47□□□□□ -0.41
GTF3C1-212ENST00000570129 POTECB2RU33 542 aa12.47□□□□□ -0.41
GTF3C1-212ENST00000570129 BBOX1O75936 387 aa12.47□□□□□ -0.41
GTF3C1-212ENST00000570129 RPS8P62241 208 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-212ENST00000570129 FAM161AQ3B820 660 aa12.47□□□□□ -0.41
GTF3C1-212ENST00000570129 SP8Q8IXZ3 490 aa12.47□□□□□ -0.41
GTF3C1-212ENST00000570129 SRCIN1Q9C0H9 1055 aa12.47□□□□□ -0.41
GTF3C1-212ENST00000570129 USP44Q9H0E7 712 aa12.47□□□□□ -0.41
GTF3C1-212ENST00000570129 RRAGCQ9HB90 399 aa12.47□□□□□ -0.41
GTF3C1-212ENST00000570129 KCNQ5Q9NR82 932 aa12.47□□□□□ -0.41
GTF3C1-212ENST00000570129 POLLQ9UGP5 575 aa12.47□□□□□ -0.41
GTF3C1-212ENST00000570129 ZNF541Q9H0D2 1346 aa12.46□□□□□ -0.41
GTF3C1-212ENST00000570129 GRM8O00222 908 aa12.46□□□□□ -0.41
GTF3C1-212ENST00000570129 RIMBP2O15034 1052 aa12.46□□□□□ -0.41
GTF3C1-212ENST00000570129 DDNO94850 711 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-212ENST00000570129 CSF1RP07333 972 aa12.46□□□□□ -0.41
GTF3C1-212ENST00000570129 AOC3Q16853 763 aa12.46□□□□□ -0.41
GTF3C1-212ENST00000570129 LMBR1LQ6UX01 489 aa12.46□□□□□ -0.41
GTF3C1-212ENST00000570129 FRAT1Q92837 279 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-212ENST00000570129 CLUAP1Q96AJ1 413 aa12.46□□□□□ -0.41
GTF3C1-212ENST00000570129 CHD4Q14839 1912 aa12.46□□□□□ -0.42
GTF3C1-212ENST00000570129 SBF1O95248 1867 aa12.45□□□□□ -0.42
GTF3C1-212ENST00000570129 KIF3CO14782 793 aa12.45□□□□□ -0.42
GTF3C1-212ENST00000570129 IARSP41252 1262 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-212ENST00000570129 RTKN2Q8IZC4 609 aa12.45□□□□□ -0.42
GTF3C1-212ENST00000570129 MPNDQ8N594 471 aa12.45□□□□□ -0.42
GTF3C1-212ENST00000570129 ANKRD44Q8N8A2 993 aa12.45□□□□□ -0.42
GTF3C1-212ENST00000570129 HELBQ8NG08 1087 aaPredicted RBP12.45□□□□□ -0.42
GTF3C1-212ENST00000570129 PLA2G12BQ9BX93 195 aa12.45□□□□□ -0.42
GTF3C1-212ENST00000570129 C9orf78Q9NZ63 289 aaPredicted RBP12.45□□□□□ -0.42
GTF3C1-212ENST00000570129 LTBP3Q9NS15 1303 aa12.44□□□□□ -0.42
GTF3C1-212ENST00000570129 ALDH1L1O75891 902 aa12.44□□□□□ -0.42
GTF3C1-212ENST00000570129 RLBP1P12271 317 aa12.44□□□□□ -0.42
GTF3C1-212ENST00000570129 ITGA6P23229 1130 aa12.44□□□□□ -0.42
GTF3C1-212ENST00000570129 KLRK1P26718 216 aa12.44□□□□□ -0.42
GTF3C1-212ENST00000570129 DOK7Q18PE1 504 aa12.44□□□□□ -0.42
GTF3C1-212ENST00000570129 CCDC152Q4G0S7 254 aa12.44□□□□□ -0.42
GTF3C1-212ENST00000570129 KLHDC4Q8TBB5 520 aa12.44□□□□□ -0.42
GTF3C1-212ENST00000570129 PUS3Q9BZE2 481 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-212ENST00000570129 NSFL1CQ9UNZ2 370 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-212ENST00000570129 FER1L6Q2WGJ9 1857 aa12.44□□□□□ -0.42
GTF3C1-212ENST00000570129 PTPRCP08575 1304 aa12.43□□□□□ -0.42
GTF3C1-212ENST00000570129 PLIN1O60240 522 aa12.43□□□□□ -0.42
GTF3C1-212ENST00000570129 TRIM27P14373 513 aa12.43□□□□□ -0.42
GTF3C1-212ENST00000570129 BRPF1P55201 1214 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-212ENST00000570129 DPP8Q6V1X1 898 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-212ENST00000570129 PSMD1Q99460 953 aa12.43□□□□□ -0.42
GTF3C1-212ENST00000570129 BICC1Q9H694 974 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-212ENST00000570129 GPBP1L1Q9HC44 474 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-212ENST00000570129 MINPP1Q9UNW1 487 aa12.43□□□□□ -0.42
GTF3C1-212ENST00000570129 CHMP3Q9Y3E7 222 aa12.43□□□□□ -0.42
GTF3C1-212ENST00000570129 SHTN1A0MZ66 631 aa12.42□□□□□ -0.42
GTF3C1-212ENST00000570129 YDJCA8MPS7 323 aa12.42□□□□□ -0.42
GTF3C1-212ENST00000570129 C6orf229H3BNL8 230 aa12.42□□□□□ -0.42
GTF3C1-212ENST00000570129 PPIP5K2O43314 1243 aa12.42□□□□□ -0.42
GTF3C1-212ENST00000570129 CT47B1P0C2W7 299 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-212ENST00000570129 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
GTF3C1-212ENST00000570129 POTEJP0CG39 1038 aa12.42□□□□□ -0.42
GTF3C1-212ENST00000570129 TXNRD3Q86VQ6 643 aa12.42□□□□□ -0.42
GTF3C1-212ENST00000570129 ANKRD18AQ8IVF6 992 aa12.42□□□□□ -0.42
GTF3C1-212ENST00000570129 LARGE2Q8N3Y3 721 aa12.42□□□□□ -0.42
GTF3C1-212ENST00000570129 TBC1D16Q8TBP0 767 aa12.42□□□□□ -0.42
GTF3C1-212ENST00000570129 MEIS3Q99687 375 aa12.42□□□□□ -0.42
GTF3C1-212ENST00000570129 RTFDC1Q9BY42 306 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-212ENST00000570129 UTYO14607 1347 aa12.41□□□□□ -0.42
GTF3C1-212ENST00000570129 GLTPD2A6NH11 291 aa12.41□□□□□ -0.42
GTF3C1-212ENST00000570129 TAF5LO75529 589 aa12.41□□□□□ -0.42
GTF3C1-212ENST00000570129 CCDC88AQ3V6T2 1871 aa12.41□□□□□ -0.42
GTF3C1-212ENST00000570129 SOGA3Q5TF21 947 aa12.41□□□□□ -0.42
GTF3C1-212ENST00000570129 TMEM57Q8N5G2 664 aa12.41□□□□□ -0.42
GTF3C1-212ENST00000570129 DBNDD1Q9H9R9 158 aa12.41□□□□□ -0.42
GTF3C1-212ENST00000570129 DUOX1Q9NRD9 1551 aa12.41□□□□□ -0.42
GTF3C1-212ENST00000570129 FZD9O00144 591 aa12.4□□□□□ -0.42
GTF3C1-212ENST00000570129 RAD17O75943 681 aa12.4□□□□□ -0.42
GTF3C1-212ENST00000570129 CC2D2BQ6DHV5 1058 aa12.4□□□□□ -0.42
GTF3C1-212ENST00000570129 PANK1Q8TE04 598 aa12.4□□□□□ -0.42
GTF3C1-212ENST00000570129 GJA3Q9Y6H8 435 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms