RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 MTMR7Q9Y216 660 aa24.06■■□□□ 1.44
SCRT1-201ENST00000569446 A1BGP04217 495 aa24.06■■□□□ 1.44
SCRT1-201ENST00000569446 TTC6Q86TZ1 520 aa24.06■■□□□ 1.44
SCRT1-201ENST00000569446 DDX21Q9NR30 783 aaKnown RBP eCLIP24.06■■□□□ 1.44
SCRT1-201ENST00000569446 SASH1O94885 1247 aa24.05■■□□□ 1.44
SCRT1-201ENST00000569446 TRDNQ13061 729 aa24.05■■□□□ 1.44
SCRT1-201ENST00000569446 VPS53Q5VIR6 699 aa24.05■■□□□ 1.44
SCRT1-201ENST00000569446 TYRO3Q06418 890 aa24.05■■□□□ 1.44
SCRT1-201ENST00000569446 EPHA10Q5JZY3 1008 aa24.05■■□□□ 1.44
SCRT1-201ENST00000569446 CCAR2Q8N163 923 aaKnown RBP24.05■■□□□ 1.44
SCRT1-201ENST00000569446 TTC41PQ6P2S7 1318 aa24.05■■□□□ 1.44
SCRT1-201ENST00000569446 ALDH1L1O75891 902 aa24.04■■□□□ 1.44
SCRT1-201ENST00000569446 HOMER1Q86YM7 354 aa24.04■■□□□ 1.44
SCRT1-201ENST00000569446 CNNM1Q9NRU3 951 aa24.04■■□□□ 1.44
SCRT1-201ENST00000569446 SCAND2PQ9GZW5 306 aaPredicted RBP24.04■■□□□ 1.44
SCRT1-201ENST00000569446 LRMPQ12912 555 aa24.03■■□□□ 1.44
SCRT1-201ENST00000569446 COL9A3Q14050 684 aaPredicted RBP24.03■■□□□ 1.44
SCRT1-201ENST00000569446 TULP1O00294 542 aaPredicted RBP24.03■■□□□ 1.44
SCRT1-201ENST00000569446 PDCL3Q9H2J4 239 aa24.03■■□□□ 1.44
SCRT1-201ENST00000569446 CLIP2Q9UDT6 1046 aa24.03■■□□□ 1.44
SCRT1-201ENST00000569446 PIBF1Q8WXW3 757 aa24.02■■□□□ 1.44
SCRT1-201ENST00000569446 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.02■■□□□ 1.44
SCRT1-201ENST00000569446 NCOA3Q9Y6Q9 1424 aa24.02■■□□□ 1.44
SCRT1-201ENST00000569446 SNRPA1P09661 255 aaKnown RBP24.02■■□□□ 1.44
SCRT1-201ENST00000569446 TTLL5Q6EMB2 1281 aa24.01■■□□□ 1.43
SCRT1-201ENST00000569446 IFNL2Q8IZJ0 200 aa24.01■■□□□ 1.43
SCRT1-201ENST00000569446 GCKRQ14397 625 aa24.01■■□□□ 1.43
SCRT1-201ENST00000569446 FSIP1Q8NA03 581 aa24.01■■□□□ 1.43
SCRT1-201ENST00000569446 CCDC158Q5M9N0 1113 aa24.01■■□□□ 1.43
SCRT1-201ENST00000569446 CCAR1Q8IX12 1150 aaKnown RBP24.01■■□□□ 1.43
SCRT1-201ENST00000569446 SIRT1Q96EB6 747 aa24.01■■□□□ 1.43
SCRT1-201ENST00000569446 TMX1Q9H3N1 280 aa24.01■■□□□ 1.43
SCRT1-201ENST00000569446 HELBQ8NG08 1087 aaPredicted RBP24■■□□□ 1.43
SCRT1-201ENST00000569446 PKNOX2Q96KN3 472 aa24■■□□□ 1.43
SCRT1-201ENST00000569446 ZHX1Q9UKY1 873 aaPredicted RBP24■■□□□ 1.43
SCRT1-201ENST00000569446 ADGRB2O60241 1585 aa24■■□□□ 1.43
SCRT1-201ENST00000569446 NRDCO43847 1150 aa24■■□□□ 1.43
SCRT1-201ENST00000569446 NRBP1Q9UHY1 535 aa23.99■■□□□ 1.43
SCRT1-201ENST00000569446 DBNLQ9UJU6 430 aaKnown RBP23.99■■□□□ 1.43
SCRT1-201ENST00000569446 NR1I2O75469 434 aa23.98■■□□□ 1.43
SCRT1-201ENST00000569446 IQSEC3Q9UPP2 1182 aaPredicted RBP23.98■■□□□ 1.43
SCRT1-201ENST00000569446 RGS12O14924 1447 aa23.98■■□□□ 1.43
SCRT1-201ENST00000569446 NEURL1BA8MQ27 555 aa23.98■■□□□ 1.43
SCRT1-201ENST00000569446 RPS6KB1P23443 525 aa23.98■■□□□ 1.43
SCRT1-201ENST00000569446 KRT32Q14532 448 aa23.98■■□□□ 1.43
SCRT1-201ENST00000569446 TNNI3KQ59H18 835 aa23.98■■□□□ 1.43
SCRT1-201ENST00000569446 FAM89AQ96GI7 184 aa23.98■■□□□ 1.43
SCRT1-201ENST00000569446 CFAP45Q9UL16 551 aa23.98■■□□□ 1.43
SCRT1-201ENST00000569446 FPGT-TNNI3KV9GXZ4 949 aa23.98■■□□□ 1.43
SCRT1-201ENST00000569446 SIGLEC1Q9BZZ2 1709 aa23.98■■□□□ 1.43
SCRT1-201ENST00000569446 MARCKSP29966 332 aaPredicted RBP23.98■■□□□ 1.43
SCRT1-201ENST00000569446 PDILTQ8N807 584 aa23.98■■□□□ 1.43
SCRT1-201ENST00000569446 POLA2Q14181 598 aa23.97■■□□□ 1.43
SCRT1-201ENST00000569446 MCMDC2Q4G0Z9 681 aa23.97■■□□□ 1.43
SCRT1-201ENST00000569446 TTLL7Q6ZT98 887 aa23.97■■□□□ 1.43
SCRT1-201ENST00000569446 FAM200AQ8TCP9 573 aa23.97■■□□□ 1.43
SCRT1-201ENST00000569446 GOLGA8BA8MQT2 603 aa23.96■■□□□ 1.43
SCRT1-201ENST00000569446 METTL24Q5JXM2 366 aa23.96■■□□□ 1.43
SCRT1-201ENST00000569446 PYCARDQ9ULZ3 195 aa23.96■■□□□ 1.43
SCRT1-201ENST00000569446 CFAP74Q9C0B2 1584 aa23.96■■□□□ 1.43
SCRT1-201ENST00000569446 A0A1B0GVL5 298 aa23.96■■□□□ 1.43
SCRT1-201ENST00000569446 GTF2E1P29083 439 aaPredicted RBP23.96■■□□□ 1.43
SCRT1-201ENST00000569446 MICU3Q86XE3 530 aa23.96■■□□□ 1.43
SCRT1-201ENST00000569446 PES1O00541 588 aaKnown RBP23.95■■□□□ 1.43
SCRT1-201ENST00000569446 TNNT1P13805 278 aa23.95■■□□□ 1.43
SCRT1-201ENST00000569446 HMGN5P82970 282 aaKnown RBP23.95■■□□□ 1.43
SCRT1-201ENST00000569446 PPP4R3BQ5MIZ7 849 aa23.95■■□□□ 1.43
SCRT1-201ENST00000569446 ZSWIM6Q9HCJ5 1215 aa23.95■■□□□ 1.43
SCRT1-201ENST00000569446 GPHNQ9NQX3 736 aaPredicted RBP23.95■■□□□ 1.43
SCRT1-201ENST00000569446 MYO5BQ9ULV0 1848 aa23.95■■□□□ 1.42
SCRT1-201ENST00000569446 IGKV5-2P06315 115 aa23.95■■□□□ 1.42
SCRT1-201ENST00000569446 PTPDC1A2A3K4 754 aa23.95■■□□□ 1.42
SCRT1-201ENST00000569446 HSPA2P54652 639 aa23.94■■□□□ 1.42
SCRT1-201ENST00000569446 NUP133Q8WUM0 1156 aa23.94■■□□□ 1.42
SCRT1-201ENST00000569446 PAG1Q9NWQ8 432 aa23.94■■□□□ 1.42
SCRT1-201ENST00000569446 U3KPZ7 1027 aaPredicted RBP23.94■■□□□ 1.42
SCRT1-201ENST00000569446 LEO1Q8WVC0 666 aaPredicted RBP23.94■■□□□ 1.42
SCRT1-201ENST00000569446 SLC4A8Q2Y0W8 1093 aa23.94■■□□□ 1.42
SCRT1-201ENST00000569446 LRRC24Q50LG9 513 aa23.94■■□□□ 1.42
SCRT1-201ENST00000569446 TRIM29Q14134 588 aa23.93■■□□□ 1.42
SCRT1-201ENST00000569446 C8orf76Q96K31 380 aa23.93■■□□□ 1.42
SCRT1-201ENST00000569446 CBX8Q9HC52 389 aa23.93■■□□□ 1.42
SCRT1-201ENST00000569446 GJB4Q9NTQ9 266 aa23.93■■□□□ 1.42
SCRT1-201ENST00000569446 CDK11BP21127 795 aaKnown RBP23.93■■□□□ 1.42
SCRT1-201ENST00000569446 PTPN21Q16825 1174 aa23.93■■□□□ 1.42
SCRT1-201ENST00000569446 KLF18A0A0U1RQI7 1052 aa23.92■■□□□ 1.42
SCRT1-201ENST00000569446 PDCL2Q8N4E4 241 aa23.92■■□□□ 1.42
SCRT1-201ENST00000569446 CCDC112Q8NEF3 446 aa23.92■■□□□ 1.42
SCRT1-201ENST00000569446 CWC25Q9NXE8 425 aaPredicted RBP23.92■■□□□ 1.42
SCRT1-201ENST00000569446 PI16Q6UXB8 463 aa23.92■■□□□ 1.42
SCRT1-201ENST00000569446 CLEC17AQ6ZS10 378 aa23.92■■□□□ 1.42
SCRT1-201ENST00000569446 METTL22Q9BUU2 404 aaPredicted RBP23.92■■□□□ 1.42
SCRT1-201ENST00000569446 PUS3Q9BZE2 481 aaKnown RBP23.92■■□□□ 1.42
SCRT1-201ENST00000569446 ORC3Q9UBD5 711 aaPredicted RBP23.92■■□□□ 1.42
SCRT1-201ENST00000569446 TMEM131LA2VDJ0 1609 aa23.92■■□□□ 1.42
SCRT1-201ENST00000569446 TPM4P67936 248 aa23.92■■□□□ 1.42
SCRT1-201ENST00000569446 ZNF396Q96N95 335 aaPredicted RBP23.92■■□□□ 1.42
SCRT1-201ENST00000569446 CEP170BQ9Y4F5 1589 aaPredicted RBP23.91■■□□□ 1.42
SCRT1-201ENST00000569446 CPLX2Q6PUV4 134 aaKnown RBP23.91■■□□□ 1.42
SCRT1-201ENST00000569446 LDHAL6AQ6ZMR3 332 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms