RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 AATKQ6ZMQ8 1374 aa7.58□□□□□ -1.2
SF3B3-210ENST00000567654 ESPNB1AK53 854 aa7.57□□□□□ -1.2
SF3B3-210ENST00000567654 ERVH48-1M5A8F1 160 aa7.57□□□□□ -1.2
SF3B3-210ENST00000567654 RRS1Q15050 365 aaKnown RBP7.57□□□□□ -1.2
SF3B3-210ENST00000567654 CDCA7Q9BWT1 371 aaPredicted RBP7.57□□□□□ -1.2
SF3B3-210ENST00000567654 ZFAND3Q9H8U3 227 aa7.57□□□□□ -1.2
SF3B3-210ENST00000567654 USP31Q70CQ4 1352 aa7.57□□□□□ -1.2
SF3B3-210ENST00000567654 NFAT5O94916 1531 aa7.57□□□□□ -1.2
SF3B3-210ENST00000567654 RNF123Q5XPI4 1314 aa7.56□□□□□ -1.2
SF3B3-210ENST00000567654 ABCA3Q99758 1704 aa7.56□□□□□ -1.2
SF3B3-210ENST00000567654 NR5A1Q13285 461 aa7.56□□□□□ -1.2
SF3B3-210ENST00000567654 SLFNL1Q499Z3 407 aa7.56□□□□□ -1.2
SF3B3-210ENST00000567654 PKDCCQ504Y2 493 aa7.56□□□□□ -1.2
SF3B3-210ENST00000567654 PPP1R26Q5T8A7 1209 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-210ENST00000567654 RNF135Q8IUD6 432 aa7.56□□□□□ -1.2
SF3B3-210ENST00000567654 CCDC116Q8IYX3 515 aa7.56□□□□□ -1.2
SF3B3-210ENST00000567654 ITPKCQ96DU7 683 aa7.56□□□□□ -1.2
SF3B3-210ENST00000567654 CDV3Q9UKY7 258 aaKnown RBP7.56□□□□□ -1.2
SF3B3-210ENST00000567654 RRP7AQ9Y3A4 280 aaKnown RBP7.56□□□□□ -1.2
SF3B3-210ENST00000567654 MST1RQ04912 1400 aa7.55□□□□□ -1.2
SF3B3-210ENST00000567654 SOX11P35716 441 aa7.55□□□□□ -1.2
SF3B3-210ENST00000567654 WDR4P57081 412 aaKnown RBP7.55□□□□□ -1.2
SF3B3-210ENST00000567654 TBC1D9Q6ZT07 1266 aa7.55□□□□□ -1.2
SF3B3-210ENST00000567654 PHTF2Q8N3S3 785 aa7.55□□□□□ -1.2
SF3B3-210ENST00000567654 NGDNQ8NEJ9 315 aaKnown RBP7.55□□□□□ -1.2
SF3B3-210ENST00000567654 COG3Q96JB2 828 aa7.55□□□□□ -1.2
SF3B3-210ENST00000567654 CFAP53Q96M91 514 aa7.55□□□□□ -1.2
SF3B3-210ENST00000567654 PLEKHF1Q96S99 279 aa7.55□□□□□ -1.2
SF3B3-210ENST00000567654 PCDHB11Q9Y5F2 797 aa7.55□□□□□ -1.2
SF3B3-210ENST00000567654 C1orf167Q5SNV9 1468 aa7.55□□□□□ -1.2
SF3B3-210ENST00000567654 TTC21AQ8NDW8 1320 aa7.54□□□□□ -1.2
SF3B3-210ENST00000567654 COL18A1P39060 1754 aa7.54□□□□□ -1.2
SF3B3-210ENST00000567654 SLIT3O75094 1523 aa7.54□□□□□ -1.2
SF3B3-210ENST00000567654 U2SURPO15042 1029 aaKnown RBP7.54□□□□□ -1.2
SF3B3-210ENST00000567654 PPM1GO15355 546 aaPredicted RBP7.54□□□□□ -1.2
SF3B3-210ENST00000567654 ST8SIA5O15466 376 aa7.54□□□□□ -1.2
SF3B3-210ENST00000567654 DIAPH1O60610 1272 aaKnown RBP7.54□□□□□ -1.2
SF3B3-210ENST00000567654 ZIC2O95409 532 aaPredicted RBP7.54□□□□□ -1.2
SF3B3-210ENST00000567654 U2AF1L5P0DN76 240 aaPredicted RBP7.54□□□□□ -1.2
SF3B3-210ENST00000567654 SKIP12755 728 aa7.54□□□□□ -1.2
SF3B3-210ENST00000567654 IL13P35225 146 aa7.54□□□□□ -1.2
SF3B3-210ENST00000567654 SCTRP47872 440 aa7.54□□□□□ -1.2
SF3B3-210ENST00000567654 U2AF1Q01081 240 aaKnown RBP eCLIP7.54□□□□□ -1.2
SF3B3-210ENST00000567654 PDE3BQ13370 1112 aa7.54□□□□□ -1.2
SF3B3-210ENST00000567654 DUSP27Q5VZP5 1158 aa7.54□□□□□ -1.2
SF3B3-210ENST00000567654 DEPDC4Q8N2C3 294 aa7.54□□□□□ -1.2
SF3B3-210ENST00000567654 TCP11L2Q8N4U5 519 aa7.54□□□□□ -1.2
SF3B3-210ENST00000567654 ZNF784Q8NCA9 323 aaPredicted RBP7.54□□□□□ -1.2
SF3B3-210ENST00000567654 RUNDC1Q96C34 613 aa7.54□□□□□ -1.2
SF3B3-210ENST00000567654 ORAI2Q96SN7 254 aa7.54□□□□□ -1.2
SF3B3-210ENST00000567654 CYLDQ9NQC7 956 aa7.54□□□□□ -1.2
SF3B3-210ENST00000567654 TMEM94Q12767 1356 aa7.54□□□□□ -1.2
SF3B3-210ENST00000567654 MED1Q15648 1581 aaPredicted RBP7.54□□□□□ -1.2
SF3B3-210ENST00000567654 NHSL1Q5SYE7 1610 aa7.53□□□□□ -1.2
SF3B3-210ENST00000567654 TIMP2P16035 220 aa7.53□□□□□ -1.2
SF3B3-210ENST00000567654 MCCD1P59942 119 aaPredicted RBP7.53□□□□□ -1.2
SF3B3-210ENST00000567654 SLFN5Q08AF3 891 aa7.53□□□□□ -1.2
SF3B3-210ENST00000567654 CBLBQ13191 982 aa7.53□□□□□ -1.2
SF3B3-210ENST00000567654 OXLD1Q5BKU9 147 aa7.53□□□□□ -1.2
SF3B3-210ENST00000567654 NUTM2GQ5VZR2 741 aa7.53□□□□□ -1.2
SF3B3-210ENST00000567654 Q6ZNB5 142 aa7.53□□□□□ -1.2
SF3B3-210ENST00000567654 TRMT2AQ8IZ69 625 aaKnown RBP7.53□□□□□ -1.2
SF3B3-210ENST00000567654 KLF16Q9BXK1 252 aaPredicted RBP7.53□□□□□ -1.2
SF3B3-210ENST00000567654 CAMTA1Q9Y6Y1 1673 aa7.53□□□□□ -1.2
SF3B3-210ENST00000567654 LCE2BO14633 110 aa7.52□□□□□ -1.21
SF3B3-210ENST00000567654 NEFLP07196 543 aa7.52□□□□□ -1.21
SF3B3-210ENST00000567654 ERICH6Q7L0X2 663 aa7.52□□□□□ -1.21
SF3B3-210ENST00000567654 CCDC82Q8N4S0 544 aa7.52□□□□□ -1.21
SF3B3-210ENST00000567654 PLPP7Q8NBV4 271 aa7.52□□□□□ -1.21
SF3B3-210ENST00000567654 ARID3AQ99856 593 aa7.52□□□□□ -1.21
SF3B3-210ENST00000567654 LRRC37A3O60309 1634 aa7.52□□□□□ -1.21
SF3B3-210ENST00000567654 MAP3K19Q56UN5 1328 aa7.52□□□□□ -1.21
SF3B3-210ENST00000567654 DGAT1O75907 488 aa7.51□□□□□ -1.21
SF3B3-210ENST00000567654 HMOX1P09601 288 aa7.51□□□□□ -1.21
SF3B3-210ENST00000567654 MYT1Q01538 1121 aa7.51□□□□□ -1.21
SF3B3-210ENST00000567654 XPCQ01831 940 aaPredicted RBP7.51□□□□□ -1.21
SF3B3-210ENST00000567654 EIF4A2Q14240 407 aaKnown RBP7.51□□□□□ -1.21
SF3B3-210ENST00000567654 HSP90AB2PQ58FF8 381 aa7.51□□□□□ -1.21
SF3B3-210ENST00000567654 ESCO1Q5FWF5 840 aa7.51□□□□□ -1.21
SF3B3-210ENST00000567654 TRAF7Q6Q0C0 670 aa7.51□□□□□ -1.21
SF3B3-210ENST00000567654 SEPT12Q8IYM1 358 aa7.51□□□□□ -1.21
SF3B3-210ENST00000567654 ZNF592Q92610 1267 aa7.51□□□□□ -1.21
SF3B3-210ENST00000567654 TFIP11Q9UBB9 837 aaKnown RBP7.51□□□□□ -1.21
SF3B3-210ENST00000567654 DACH1Q9UI36 760 aa7.51□□□□□ -1.21
SF3B3-210ENST00000567654 RCAN3Q9UKA8 241 aa7.51□□□□□ -1.21
SF3B3-210ENST00000567654 DOLKQ9UPQ8 538 aa7.51□□□□□ -1.21
SF3B3-210ENST00000567654 DCCP43146 1447 aa7.51□□□□□ -1.21
SF3B3-210ENST00000567654 ZNF335Q9H4Z2 1342 aaPredicted RBP7.51□□□□□ -1.21
SF3B3-210ENST00000567654 PXDNQ92626 1479 aa7.5□□□□□ -1.21
SF3B3-210ENST00000567654 SBNO1A3KN83 1393 aa7.5□□□□□ -1.21
SF3B3-210ENST00000567654 PALM3A6NDB9 673 aaPredicted RBP7.5□□□□□ -1.21
SF3B3-210ENST00000567654 CAPN5O15484 640 aaPredicted RBP7.5□□□□□ -1.21
SF3B3-210ENST00000567654 LILRA1O75019 489 aa7.5□□□□□ -1.21
SF3B3-210ENST00000567654 BMP1P13497 986 aa7.5□□□□□ -1.21
SF3B3-210ENST00000567654 RFX1P22670 979 aa7.5□□□□□ -1.21
SF3B3-210ENST00000567654 PRKAR2BP31323 418 aa7.5□□□□□ -1.21
SF3B3-210ENST00000567654 ADD1P35611 737 aaKnown RBP7.5□□□□□ -1.21
SF3B3-210ENST00000567654 TMPOP42166 694 aaKnown RBP7.5□□□□□ -1.21
SF3B3-210ENST00000567654 RRP1P56182 461 aaKnown RBP7.5□□□□□ -1.21
SF3B3-210ENST00000567654 RNF20Q5VTR2 975 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms