RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 MASTLQ96GX5 879 aa13.56□□□□□ -0.24
LINC00564-201ENST00000567258 NYXQ9GZU5 481 aa13.56□□□□□ -0.24
LINC00564-201ENST00000567258 BABAM1Q9NWV8 329 aa13.56□□□□□ -0.24
LINC00564-201ENST00000567258 FER1L6Q2WGJ9 1857 aa13.56□□□□□ -0.24
LINC00564-201ENST00000567258 ZC3H4Q9UPT8 1303 aaKnown RBP13.56□□□□□ -0.24
LINC00564-201ENST00000567258 TIAM2Q8IVF5 1701 aa13.56□□□□□ -0.24
LINC00564-201ENST00000567258 SLX4Q8IY92 1834 aa13.55□□□□□ -0.24
LINC00564-201ENST00000567258 C21orf2O43822 256 aa13.55□□□□□ -0.24
LINC00564-201ENST00000567258 SLC34A2O95436 690 aa13.55□□□□□ -0.24
LINC00564-201ENST00000567258 CCDC146Q8IYE0 955 aa13.55□□□□□ -0.24
LINC00564-201ENST00000567258 ERVV-1B6SEH8 477 aa13.54□□□□□ -0.24
LINC00564-201ENST00000567258 SRGNP10124 158 aa13.54□□□□□ -0.24
LINC00564-201ENST00000567258 HSPA6P17066 643 aa13.54□□□□□ -0.24
LINC00564-201ENST00000567258 EIF2S2P20042 333 aaKnown RBP13.54□□□□□ -0.24
LINC00564-201ENST00000567258 ZEB1P37275 1124 aaPredicted RBP13.54□□□□□ -0.24
LINC00564-201ENST00000567258 NMRK2Q9NPI5 230 aa13.54□□□□□ -0.24
LINC00564-201ENST00000567258 LAS1LQ9Y4W2 734 aaKnown RBP13.54□□□□□ -0.24
LINC00564-201ENST00000567258 ERBB4Q15303 1308 aa13.54□□□□□ -0.24
LINC00564-201ENST00000567258 NPR1P16066 1061 aa13.53□□□□□ -0.24
LINC00564-201ENST00000567258 TMC2Q8TDI7 906 aa13.53□□□□□ -0.24
LINC00564-201ENST00000567258 MAP3K15Q6ZN16 1313 aa13.53□□□□□ -0.24
LINC00564-201ENST00000567258 ALDH1B1P30837 517 aa13.52□□□□□ -0.25
LINC00564-201ENST00000567258 HLFQ16534 295 aa13.52□□□□□ -0.25
LINC00564-201ENST00000567258 PRPF40BQ6NWY9 871 aaKnown RBP13.52□□□□□ -0.25
LINC00564-201ENST00000567258 TAOK3Q9H2K8 898 aa13.52□□□□□ -0.25
LINC00564-201ENST00000567258 ZBTB3Q9H5J0 574 aa13.52□□□□□ -0.25
LINC00564-201ENST00000567258 PRKRIP1Q9H875 184 aaPredicted RBP13.52□□□□□ -0.25
LINC00564-201ENST00000567258 RRAGCQ9HB90 399 aa13.52□□□□□ -0.25
LINC00564-201ENST00000567258 ERFEQ4G0M1 354 aa13.51□□□□□ -0.25
LINC00564-201ENST00000567258 ADAMTS8Q9UP79 889 aa13.51□□□□□ -0.25
LINC00564-201ENST00000567258 CEP350Q5VT06 3117 aa13.51□□□□□ -0.25
LINC00564-201ENST00000567258 GLTPD2A6NH11 291 aa13.5□□□□□ -0.25
LINC00564-201ENST00000567258 ECM2O94769 699 aaPredicted RBP13.5□□□□□ -0.25
LINC00564-201ENST00000567258 APLP1P51693 650 aa13.5□□□□□ -0.25
LINC00564-201ENST00000567258 CCDC93Q567U6 631 aa13.5□□□□□ -0.25
LINC00564-201ENST00000567258 TTLL7Q6ZT98 887 aa13.5□□□□□ -0.25
LINC00564-201ENST00000567258 PPP1R42Q7Z4L9 355 aa13.5□□□□□ -0.25
LINC00564-201ENST00000567258 RBM46Q8TBY0 533 aaKnown RBP13.5□□□□□ -0.25
LINC00564-201ENST00000567258 RPGRQ92834 1020 aaKnown RBP13.5□□□□□ -0.25
LINC00564-201ENST00000567258 NFKBIEO00221 500 aa13.49□□□□□ -0.25
LINC00564-201ENST00000567258 VEGFAP15692 232 aaPredicted RBP13.49□□□□□ -0.25
LINC00564-201ENST00000567258 GPTP24298 496 aa13.49□□□□□ -0.25
LINC00564-201ENST00000567258 CALD1Q05682 793 aaKnown RBP13.49□□□□□ -0.25
LINC00564-201ENST00000567258 GIGYF2Q6Y7W6 1299 aaKnown RBP13.49□□□□□ -0.25
LINC00564-201ENST00000567258 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
LINC00564-201ENST00000567258 TMX4Q9H1E5 349 aaPredicted RBP13.49□□□□□ -0.25
LINC00564-201ENST00000567258 ANKRD36CQ5JPF3 1778 aa13.49□□□□□ -0.25
LINC00564-201ENST00000567258 LTBP3Q9NS15 1303 aa13.48□□□□□ -0.25
LINC00564-201ENST00000567258 FSTL1Q12841 308 aa13.48□□□□□ -0.25
LINC00564-201ENST00000567258 PARP10Q53GL7 1025 aa13.48□□□□□ -0.25
LINC00564-201ENST00000567258 NUTM1Q86Y26 1132 aa13.48□□□□□ -0.25
LINC00564-201ENST00000567258 RTKN2Q8IZC4 609 aa13.48□□□□□ -0.25
LINC00564-201ENST00000567258 KLRG2A4D1S0 409 aaPredicted RBP13.47□□□□□ -0.25
LINC00564-201ENST00000567258 CHL1O00533 1208 aa13.47□□□□□ -0.25
LINC00564-201ENST00000567258 AIMP1Q12904 312 aaKnown RBP13.47□□□□□ -0.25
LINC00564-201ENST00000567258 HSP90AB3PQ58FF7 597 aa13.47□□□□□ -0.25
LINC00564-201ENST00000567258 SMC1BQ8NDV3 1235 aa13.47□□□□□ -0.25
LINC00564-201ENST00000567258 IBTKQ9P2D0 1353 aaPredicted RBP13.46□□□□□ -0.25
LINC00564-201ENST00000567258 RBM17Q96I25 401 aaKnown RBP13.46□□□□□ -0.25
LINC00564-201ENST00000567258 WDR90Q96KV7 1748 aa13.45□□□□□ -0.26
LINC00564-201ENST00000567258 HOXB7P09629 217 aa13.45□□□□□ -0.26
LINC00564-201ENST00000567258 FKBP4Q02790 459 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC00564-201ENST00000567258 HDGFL1Q5TGJ6 251 aa13.45□□□□□ -0.26
LINC00564-201ENST00000567258 SUSD4Q5VX71 490 aa13.45□□□□□ -0.26
LINC00564-201ENST00000567258 COPS6Q7L5N1 327 aa13.45□□□□□ -0.26
LINC00564-201ENST00000567258 ZNF34Q8IZ26 560 aa13.45□□□□□ -0.26
LINC00564-201ENST00000567258 CFAP44Q96MT7 982 aa13.45□□□□□ -0.26
LINC00564-201ENST00000567258 NLRP3Q96P20 1036 aa13.45□□□□□ -0.26
LINC00564-201ENST00000567258 UTP14AQ9BVJ6 771 aaKnown RBP13.45□□□□□ -0.26
LINC00564-201ENST00000567258 DDX21Q9NR30 783 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC00564-201ENST00000567258 PLA2G2EQ9NZK7 142 aa13.45□□□□□ -0.26
LINC00564-201ENST00000567258 HCSTQ9UBK5 93 aa13.45□□□□□ -0.26
LINC00564-201ENST00000567258 APAF1O14727 1248 aa13.44□□□□□ -0.26
LINC00564-201ENST00000567258 ANXA1P04083 346 aa13.44□□□□□ -0.26
LINC00564-201ENST00000567258 PRELPP51888 382 aa13.44□□□□□ -0.26
LINC00564-201ENST00000567258 GNAI1P63096 354 aa13.44□□□□□ -0.26
LINC00564-201ENST00000567258 PDIA6Q15084 440 aa13.44□□□□□ -0.26
LINC00564-201ENST00000567258 GRIPAP1Q4V328 841 aa13.44□□□□□ -0.26
LINC00564-201ENST00000567258 CC2D2BQ6DHV5 1058 aa13.44□□□□□ -0.26
LINC00564-201ENST00000567258 XAGE3Q8WTP9 111 aa13.44□□□□□ -0.26
LINC00564-201ENST00000567258 CHMP4AQ9BY43 222 aa13.44□□□□□ -0.26
LINC00564-201ENST00000567258 DBF4Q9UBU7 674 aaPredicted RBP13.44□□□□□ -0.26
LINC00564-201ENST00000567258 SCN4AP35499 1836 aa13.43□□□□□ -0.26
LINC00564-201ENST00000567258 RNF123Q5XPI4 1314 aa13.43□□□□□ -0.26
LINC00564-201ENST00000567258 UBN2Q6ZU65 1347 aa13.43□□□□□ -0.26
LINC00564-201ENST00000567258 ARHGAP33O14559 1287 aa13.43□□□□□ -0.26
LINC00564-201ENST00000567258 PROSER3Q2NL68 480 aa13.43□□□□□ -0.26
LINC00564-201ENST00000567258 CRY2Q49AN0 593 aa13.43□□□□□ -0.26
LINC00564-201ENST00000567258 RIC1Q4ADV7 1423 aa13.43□□□□□ -0.26
LINC00564-201ENST00000567258 ADGRD1Q6QNK2 874 aa13.43□□□□□ -0.26
LINC00564-201ENST00000567258 JDP2Q8WYK2 163 aa13.43□□□□□ -0.26
LINC00564-201ENST00000567258 ABCC12Q96J65 1359 aa13.43□□□□□ -0.26
LINC00564-201ENST00000567258 IQCA1LA6NCM1 817 aa13.42□□□□□ -0.26
LINC00564-201ENST00000567258 PPP1R37O75864 691 aa13.42□□□□□ -0.26
LINC00564-201ENST00000567258 NTSR2O95665 410 aa13.42□□□□□ -0.26
LINC00564-201ENST00000567258 C7orf43Q8WVR3 580 aa13.42□□□□□ -0.26
LINC00564-201ENST00000567258 ZNF277Q9NRM2 450 aaPredicted RBP13.42□□□□□ -0.26
LINC00564-201ENST00000567258 HYPKQ9NX55 129 aa13.42□□□□□ -0.26
LINC00564-201ENST00000567258 CHPF2Q9P2E5 772 aa13.42□□□□□ -0.26
LINC00564-201ENST00000567258 LAMB2P55268 1798 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms