RNA–Protein interactions for RNA: ENST00000566249.5

KARS-206, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-206ENST00000566249 XKR5Q6UX68 686 aa9.81□□□□□ -0.84
KARS-206ENST00000566249 ELP3Q9H9T3 547 aa9.81□□□□□ -0.84
KARS-206ENST00000566249 IGHA2P01877 340 aa9.8□□□□□ -0.84
KARS-206ENST00000566249 MAP2K3P46734 347 aa9.8□□□□□ -0.84
KARS-206ENST00000566249 CNTNAP3BQ96NU0 1288 aa9.8□□□□□ -0.84
KARS-206ENST00000566249 CNTNAP3Q9BZ76 1288 aa9.8□□□□□ -0.84
KARS-206ENST00000566249 NIF3L1Q9GZT8 377 aa9.8□□□□□ -0.84
KARS-206ENST00000566249 EFCC1Q9HA90 598 aa9.8□□□□□ -0.84
KARS-206ENST00000566249 TMEM63CQ9P1W3 806 aa9.8□□□□□ -0.84
KARS-206ENST00000566249 ZFATQ9P243 1243 aa9.8□□□□□ -0.84
KARS-206ENST00000566249 IGF1RP08069 1367 aa9.79□□□□□ -0.84
KARS-206ENST00000566249 KRT76Q01546 638 aa9.79□□□□□ -0.84
KARS-206ENST00000566249 LCE2CQ5TA81 110 aa9.79□□□□□ -0.84
KARS-206ENST00000566249 ZNF468Q5VIY5 522 aaPredicted RBP9.79□□□□□ -0.84
KARS-206ENST00000566249 ABI2Q9NYB9 513 aaPredicted RBP9.79□□□□□ -0.84
KARS-206ENST00000566249 PCBP4P57723 403 aaKnown RBP9.78□□□□□ -0.84
KARS-206ENST00000566249 TTC39BQ5VTQ0 682 aaPredicted RBP9.78□□□□□ -0.84
KARS-206ENST00000566249 SYT9Q86SS6 491 aa9.78□□□□□ -0.84
KARS-206ENST00000566249 TREHO43280 583 aa9.77□□□□□ -0.85
KARS-206ENST00000566249 MMP20O60882 483 aa9.77□□□□□ -0.85
KARS-206ENST00000566249 TNFRSF21O75509 655 aa9.77□□□□□ -0.85
KARS-206ENST00000566249 ERCC3P19447 782 aa9.77□□□□□ -0.85
KARS-206ENST00000566249 GMPRP36959 345 aa9.77□□□□□ -0.85
KARS-206ENST00000566249 PLCB3Q01970 1234 aa9.77□□□□□ -0.85
KARS-206ENST00000566249 ALKBH8Q96BT7 664 aaKnown RBP9.77□□□□□ -0.85
KARS-206ENST00000566249 FOXD3Q9UJU5 478 aaPredicted RBP9.77□□□□□ -0.85
KARS-206ENST00000566249 PHACTR2O75167 634 aa9.76□□□□□ -0.85
KARS-206ENST00000566249 MAP3K6O95382 1288 aa9.76□□□□□ -0.85
KARS-206ENST00000566249 ARAFP10398 606 aa9.76□□□□□ -0.85
KARS-206ENST00000566249 SRSF11Q05519 484 aaKnown RBP9.76□□□□□ -0.85
KARS-206ENST00000566249 DSC3Q14574 896 aa9.76□□□□□ -0.85
KARS-206ENST00000566249 TREML4Q6UXN2 200 aa9.76□□□□□ -0.85
KARS-206ENST00000566249 NPAS4Q8IUM7 802 aa9.76□□□□□ -0.85
KARS-206ENST00000566249 SNX29Q8TEQ0 813 aa9.76□□□□□ -0.85
KARS-206ENST00000566249 AVENQ9NQS1 362 aaPredicted RBP9.76□□□□□ -0.85
KARS-206ENST00000566249 NEFLP07196 543 aa9.75□□□□□ -0.85
KARS-206ENST00000566249 ORC1Q13415 861 aa9.75□□□□□ -0.85
KARS-206ENST00000566249 IGFLR1Q9H665 355 aa9.75□□□□□ -0.85
KARS-206ENST00000566249 CNTN3Q9P232 1028 aa9.75□□□□□ -0.85
KARS-206ENST00000566249 SIN3BO75182 1162 aa9.74□□□□□ -0.85
KARS-206ENST00000566249 ADAMTS2O95450 1211 aa9.74□□□□□ -0.85
KARS-206ENST00000566249 PSAPP07602 524 aa9.74□□□□□ -0.85
KARS-206ENST00000566249 ADH6P28332 368 aa9.74□□□□□ -0.85
KARS-206ENST00000566249 FMR1Q06787 632 aaKnown RBP eCLIP9.74□□□□□ -0.85
KARS-206ENST00000566249 TBC1D8BQ0IIM8 1120 aa9.74□□□□□ -0.85
KARS-206ENST00000566249 DHX32Q7L7V1 743 aaKnown RBP9.74□□□□□ -0.85
KARS-206ENST00000566249 C1orf127Q8N9H9 656 aa9.74□□□□□ -0.85
KARS-206ENST00000566249 UBE2OQ9C0C9 1292 aaKnown RBP9.74□□□□□ -0.85
KARS-206ENST00000566249 TLR7Q9NYK1 1049 aaKnown RBP9.74□□□□□ -0.85
KARS-206ENST00000566249 KLF15Q9UIH9 416 aa9.74□□□□□ -0.85
KARS-206ENST00000566249 NEURL1BA8MQ27 555 aa9.73□□□□□ -0.85
KARS-206ENST00000566249 MAPK8P45983 427 aa9.73□□□□□ -0.85
KARS-206ENST00000566249 RGS22Q8NE09 1264 aa9.73□□□□□ -0.85
KARS-206ENST00000566249 OR13H1Q8NG92 308 aa9.73□□□□□ -0.85
KARS-206ENST00000566249 OXCT2Q9BYC2 517 aaPredicted RBP9.73□□□□□ -0.85
KARS-206ENST00000566249 GGA1Q9UJY5 639 aa9.73□□□□□ -0.85
KARS-206ENST00000566249 PHF20L1A8MW92 1017 aa9.72□□□□□ -0.85
KARS-206ENST00000566249 EIF1AYO14602 144 aaKnown RBP9.72□□□□□ -0.85
KARS-206ENST00000566249 CYP2E1P05181 493 aaPredicted RBP9.72□□□□□ -0.85
KARS-206ENST00000566249 P4HBP07237 508 aaKnown RBP9.72□□□□□ -0.85
KARS-206ENST00000566249 CES1P23141 567 aa9.72□□□□□ -0.85
KARS-206ENST00000566249 GOLGA6L1Q8N7Z2 621 aa9.72□□□□□ -0.85
KARS-206ENST00000566249 CSRNP1Q96S65 589 aa9.72□□□□□ -0.85
KARS-206ENST00000566249 CHRDQ9H2X0 955 aa9.72□□□□□ -0.85
KARS-206ENST00000566249 ZFYVE28Q9HCC9 887 aa9.72□□□□□ -0.85
KARS-206ENST00000566249 CPNE3O75131 537 aaKnown RBP9.71□□□□□ -0.86
KARS-206ENST00000566249 SOX18P35713 384 aa9.71□□□□□ -0.86
KARS-206ENST00000566249 PLAURQ03405 335 aa9.71□□□□□ -0.86
KARS-206ENST00000566249 COL19A1Q14993 1142 aa9.71□□□□□ -0.86
KARS-206ENST00000566249 FCHSD1Q86WN1 690 aa9.71□□□□□ -0.86
KARS-206ENST00000566249 PMEPA1Q969W9 287 aa9.71□□□□□ -0.86
KARS-206ENST00000566249 ACDQ96AP0 544 aa9.71□□□□□ -0.86
KARS-206ENST00000566249 DNAJB12Q9NXW2 375 aaKnown RBP9.71□□□□□ -0.86
KARS-206ENST00000566249 KANSL3Q9P2N6 904 aa9.71□□□□□ -0.86
KARS-206ENST00000566249 GDF2Q9UK05 429 aaPredicted RBP9.71□□□□□ -0.86
KARS-206ENST00000566249 PNMA6FA0A0J9YX94 578 aa9.7□□□□□ -0.86
KARS-206ENST00000566249 EREGO14944 169 aa9.7□□□□□ -0.86
KARS-206ENST00000566249 NRLP54845 237 aa9.7□□□□□ -0.86
KARS-206ENST00000566249 MLLT1Q03111 559 aaPredicted RBP9.7□□□□□ -0.86
KARS-206ENST00000566249 EAPPQ56P03 285 aaPredicted RBP9.7□□□□□ -0.86
KARS-206ENST00000566249 USPL1Q5W0Q7 1092 aa9.7□□□□□ -0.86
KARS-206ENST00000566249 TNFRSF25Q93038 417 aa9.7□□□□□ -0.86
KARS-206ENST00000566249 NSUN5Q96P11 429 aaKnown RBP9.7□□□□□ -0.86
KARS-206ENST00000566249 DNAJC25Q9H1X3 360 aa9.7□□□□□ -0.86
KARS-206ENST00000566249 AMOTL2Q9Y2J4 779 aa9.7□□□□□ -0.86
KARS-206ENST00000566249 GPLD1P80108 840 aa9.69□□□□□ -0.86
KARS-206ENST00000566249 ENOX2Q16206 610 aaKnown RBP9.69□□□□□ -0.86
KARS-206ENST00000566249 LCE2AQ5TA79 106 aaPredicted RBP9.69□□□□□ -0.86
KARS-206ENST00000566249 SLCO4C1Q6ZQN7 724 aa9.69□□□□□ -0.86
KARS-206ENST00000566249 TRPM4Q8TD43 1214 aa9.69□□□□□ -0.86
KARS-206ENST00000566249 FOXD4L4Q8WXT5 416 aaPredicted RBP9.69□□□□□ -0.86
KARS-206ENST00000566249 ADARB2-AS1A8MUL3 147 aa9.68□□□□□ -0.86
KARS-206ENST00000566249 ZBTB42B2RXF5 422 aa9.68□□□□□ -0.86
KARS-206ENST00000566249 POLR3DP05423 398 aaPredicted RBP9.68□□□□□ -0.86
KARS-206ENST00000566249 SLURP2P0DP57 97 aa9.68□□□□□ -0.86
KARS-206ENST00000566249 HOXD8P13378 290 aaPredicted RBP9.68□□□□□ -0.86
KARS-206ENST00000566249 ADH7P40394 386 aa9.68□□□□□ -0.86
KARS-206ENST00000566249 HYAL2Q12891 473 aa9.68□□□□□ -0.86
KARS-206ENST00000566249 PCSK7Q16549 785 aa9.68□□□□□ -0.86
KARS-206ENST00000566249 COL13A1Q5TAT6 717 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms