RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.63■■□□□ 1.37
PKD1-230ENST00000565639 PLSCR1O15162 318 aa23.63■■□□□ 1.37
PKD1-230ENST00000565639 GLRX3O76003 335 aaKnown RBP23.63■■□□□ 1.37
PKD1-230ENST00000565639 TFCP2Q12800 502 aa23.63■■□□□ 1.37
PKD1-230ENST00000565639 TRAPPC3LQ5T215 181 aa23.63■■□□□ 1.37
PKD1-230ENST00000565639 POTEAQ6S8J7 498 aa23.63■■□□□ 1.37
PKD1-230ENST00000565639 GPR108Q9NPR9 543 aa23.63■■□□□ 1.37
PKD1-230ENST00000565639 LAMB2P55268 1798 aa23.62■■□□□ 1.37
PKD1-230ENST00000565639 CASC1Q6TDU7 716 aa23.61■■□□□ 1.37
PKD1-230ENST00000565639 AMIGO3Q86WK7 504 aa23.61■■□□□ 1.37
PKD1-230ENST00000565639 ZNF594Q96JF6 807 aaPredicted RBP23.61■■□□□ 1.37
PKD1-230ENST00000565639 TXNRD1Q16881 649 aa23.61■■□□□ 1.37
PKD1-230ENST00000565639 TNNI3KQ59H18 835 aa23.61■■□□□ 1.37
PKD1-230ENST00000565639 SMIM5Q71RC9 77 aa23.61■■□□□ 1.37
PKD1-230ENST00000565639 SRP68Q9UHB9 627 aaKnown RBP23.61■■□□□ 1.37
PKD1-230ENST00000565639 FPGT-TNNI3KV9GXZ4 949 aa23.61■■□□□ 1.37
PKD1-230ENST00000565639 C4AP0C0L4 1744 aa23.61■■□□□ 1.37
PKD1-230ENST00000565639 ANKRD18BA2A2Z9 1011 aa23.6■■□□□ 1.37
PKD1-230ENST00000565639 ITGA6P23229 1130 aa23.6■■□□□ 1.37
PKD1-230ENST00000565639 RFC4P35249 363 aa23.6■■□□□ 1.37
PKD1-230ENST00000565639 MFAP1P55081 439 aaKnown RBP23.6■■□□□ 1.37
PKD1-230ENST00000565639 TBC1D32Q96NH3 1257 aa23.6■■□□□ 1.37
PKD1-230ENST00000565639 GREM2Q9H772 168 aa23.6■■□□□ 1.37
PKD1-230ENST00000565639 UBR3Q6ZT12 1888 aa23.6■■□□□ 1.37
PKD1-230ENST00000565639 FAM177BA6PVY3 158 aa23.6■■□□□ 1.37
PKD1-230ENST00000565639 TAF7LQ5H9L4 462 aa23.6■■□□□ 1.37
PKD1-230ENST00000565639 TBC1D9BQ66K14 1250 aa23.6■■□□□ 1.37
PKD1-230ENST00000565639 CCDC8Q9H0W5 538 aaPredicted RBP23.6■■□□□ 1.37
PKD1-230ENST00000565639 DDX60Q8IY21 1712 aaKnown RBP23.59■■□□□ 1.37
PKD1-230ENST00000565639 LRRC24Q50LG9 513 aa23.59■■□□□ 1.37
PKD1-230ENST00000565639 PROM2Q8N271 834 aa23.59■■□□□ 1.37
PKD1-230ENST00000565639 EP400Q96L91 3159 aa23.59■■□□□ 1.37
PKD1-230ENST00000565639 TRIM6-TRIM34B2RNG4 842 aa23.58■■□□□ 1.37
PKD1-230ENST00000565639 HCLS1P14317 486 aaPredicted RBP23.58■■□□□ 1.37
PKD1-230ENST00000565639 CCDC85AQ96PX6 553 aaPredicted RBP23.58■■□□□ 1.37
PKD1-230ENST00000565639 COL24A1Q17RW2 1714 aa23.58■■□□□ 1.37
PKD1-230ENST00000565639 RTL9Q8NET4 1388 aa23.58■■□□□ 1.37
PKD1-230ENST00000565639 SSFA2P28290 1259 aa23.58■■□□□ 1.36
PKD1-230ENST00000565639 SETDB2Q96T68 719 aa23.58■■□□□ 1.36
PKD1-230ENST00000565639 PUS3Q9BZE2 481 aaKnown RBP23.58■■□□□ 1.36
PKD1-230ENST00000565639 NYXQ9GZU5 481 aa23.58■■□□□ 1.36
PKD1-230ENST00000565639 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.56■■□□□ 1.36
PKD1-230ENST00000565639 PHF14O94880 888 aa23.56■■□□□ 1.36
PKD1-230ENST00000565639 APBA3O96018 575 aa23.56■■□□□ 1.36
PKD1-230ENST00000565639 TLR7Q9NYK1 1049 aaKnown RBP23.56■■□□□ 1.36
PKD1-230ENST00000565639 CEP126Q9P2H0 1117 aa23.56■■□□□ 1.36
PKD1-230ENST00000565639 CCDC152Q4G0S7 254 aa23.56■■□□□ 1.36
PKD1-230ENST00000565639 CNTROBQ8N137 903 aa23.56■■□□□ 1.36
PKD1-230ENST00000565639 RILPL2Q969X0 211 aa23.56■■□□□ 1.36
PKD1-230ENST00000565639 DBNLQ9UJU6 430 aaKnown RBP23.56■■□□□ 1.36
PKD1-230ENST00000565639 SLC10A5Q5PT55 438 aa23.55■■□□□ 1.36
PKD1-230ENST00000565639 IPO9Q96P70 1041 aaKnown RBP23.55■■□□□ 1.36
PKD1-230ENST00000565639 C22orf23Q9BZE7 217 aa23.55■■□□□ 1.36
PKD1-230ENST00000565639 LDHAL6AQ6ZMR3 332 aa23.54■■□□□ 1.36
PKD1-230ENST00000565639 BICDL1Q6ZP65 573 aa23.54■■□□□ 1.36
PKD1-230ENST00000565639 RIPOR2Q9Y4F9 1068 aa23.54■■□□□ 1.36
PKD1-230ENST00000565639 LRP5O75197 1615 aa23.54■■□□□ 1.36
PKD1-230ENST00000565639 AKAP2Q9Y2D5 859 aa23.54■■□□□ 1.36
PKD1-230ENST00000565639 ZNF609O15014 1411 aa23.53■■□□□ 1.36
PKD1-230ENST00000565639 ERFEQ4G0M1 354 aa23.53■■□□□ 1.36
PKD1-230ENST00000565639 DDRGK1Q96HY6 314 aa23.53■■□□□ 1.36
PKD1-230ENST00000565639 TNS1Q9HBL0 1735 aaKnown RBP23.53■■□□□ 1.36
PKD1-230ENST00000565639 AK9Q5TCS8 1911 aa23.53■■□□□ 1.36
PKD1-230ENST00000565639 RGPD3A6NKT7 1758 aaPredicted RBP23.52■■□□□ 1.36
PKD1-230ENST00000565639 RGPD4Q7Z3J3 1758 aa23.52■■□□□ 1.36
PKD1-230ENST00000565639 ATP5JP18859 108 aa23.52■■□□□ 1.36
PKD1-230ENST00000565639 CHMLP26374 656 aa23.52■■□□□ 1.36
PKD1-230ENST00000565639 SF3B3Q15393 1217 aaKnown RBP23.52■■□□□ 1.36
PKD1-230ENST00000565639 TPTE2Q6XPS3 522 aa23.52■■□□□ 1.36
PKD1-230ENST00000565639 NBPF5PQ86XG9 351 aaPredicted RBP23.52■■□□□ 1.36
PKD1-230ENST00000565639 GTF2E1P29083 439 aaPredicted RBP23.51■■□□□ 1.35
PKD1-230ENST00000565639 DBNDD2Q9BQY9 259 aa23.51■■□□□ 1.35
PKD1-230ENST00000565639 RBM25P49756 843 aaKnown RBP23.51■■□□□ 1.35
PKD1-230ENST00000565639 EVI5LQ96CN4 794 aa23.51■■□□□ 1.35
PKD1-230ENST00000565639 CNNM1Q9NRU3 951 aa23.51■■□□□ 1.35
PKD1-230ENST00000565639 RIC1Q4ADV7 1423 aa23.5■■□□□ 1.35
PKD1-230ENST00000565639 CARMIL3Q8ND23 1372 aa23.5■■□□□ 1.35
PKD1-230ENST00000565639 A0A1B0GUL7 405 aa23.49■■□□□ 1.35
PKD1-230ENST00000565639 REC8O95072 547 aa23.49■■□□□ 1.35
PKD1-230ENST00000565639 MAP4K4O95819 1239 aaPredicted RBP23.49■■□□□ 1.35
PKD1-230ENST00000565639 NEUROD6Q96NK8 337 aa23.49■■□□□ 1.35
PKD1-230ENST00000565639 TIMM10P62072 90 aa23.49■■□□□ 1.35
PKD1-230ENST00000565639 METTL24Q5JXM2 366 aa23.49■■□□□ 1.35
PKD1-230ENST00000565639 NFIXQ14938 502 aa23.48■■□□□ 1.35
PKD1-230ENST00000565639 ESYT1Q9BSJ8 1104 aa23.48■■□□□ 1.35
PKD1-230ENST00000565639 ABCC12Q96J65 1359 aa23.48■■□□□ 1.35
PKD1-230ENST00000565639 MROH5Q6ZUA9 1318 aa23.48■■□□□ 1.35
PKD1-230ENST00000565639 GYS1P13807 737 aa23.47■■□□□ 1.35
PKD1-230ENST00000565639 AKT1S1Q96B36 256 aa23.47■■□□□ 1.35
PKD1-230ENST00000565639 BOLA2Q9H3K6 86 aa23.47■■□□□ 1.35
PKD1-230ENST00000565639 VGLL2Q8N8G2 317 aa23.47■■□□□ 1.35
PKD1-230ENST00000565639 CDC5LQ99459 802 aaKnown RBP23.47■■□□□ 1.35
PKD1-230ENST00000565639 SEC31BQ9NQW1 1179 aa23.47■■□□□ 1.35
PKD1-230ENST00000565639 IGHMBP2P38935 993 aaKnown RBP23.46■■□□□ 1.35
PKD1-230ENST00000565639 MPHOSPH8Q99549 860 aa23.46■■□□□ 1.35
PKD1-230ENST00000565639 NLRP3Q96P20 1036 aa23.45■■□□□ 1.35
PKD1-230ENST00000565639 PDE8BO95263 885 aa23.45■■□□□ 1.34
PKD1-230ENST00000565639 ATP2B3Q16720 1220 aa23.45■■□□□ 1.34
PKD1-230ENST00000565639 USP26Q9BXU7 913 aa23.45■■□□□ 1.34
PKD1-230ENST00000565639 ZNF827Q17R98 1081 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms