RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 CHRNA5P30532 468 aa8.54□□□□□ -1.04
UBFD1-204ENST00000565634 RPIAP49247 311 aa8.54□□□□□ -1.04
UBFD1-204ENST00000565634 EIF4G2P78344 907 aaKnown RBP eCLIP8.54□□□□□ -1.04
UBFD1-204ENST00000565634 LINC00116Q8NCU8 138 aa8.54□□□□□ -1.04
UBFD1-204ENST00000565634 PRDM10Q9NQV6 1147 aa8.54□□□□□ -1.04
UBFD1-204ENST00000565634 SALL2Q9Y467 1007 aaPredicted RBP8.54□□□□□ -1.04
UBFD1-204ENST00000565634 CENPJQ9HC77 1338 aaPredicted RBP8.54□□□□□ -1.04
UBFD1-204ENST00000565634 TNRC6CQ9HCJ0 1690 aaKnown RBP8.53□□□□□ -1.04
UBFD1-204ENST00000565634 ST8SIA5O15466 376 aa8.53□□□□□ -1.04
UBFD1-204ENST00000565634 CTCFP49711 727 aaPredicted RBP8.53□□□□□ -1.04
UBFD1-204ENST00000565634 VEGFBP49765 207 aa8.53□□□□□ -1.04
UBFD1-204ENST00000565634 TGFB2P61812 414 aa8.53□□□□□ -1.04
UBFD1-204ENST00000565634 RNF19BQ6ZMZ0 732 aa8.53□□□□□ -1.04
UBFD1-204ENST00000565634 VIRMAQ69YN4 1812 aaKnown RBP8.52□□□□□ -1.04
UBFD1-204ENST00000565634 PALLDQ8WX93 1383 aa8.52□□□□□ -1.05
UBFD1-204ENST00000565634 VEGFAP15692 232 aaPredicted RBP8.52□□□□□ -1.05
UBFD1-204ENST00000565634 AIDAQ96BJ3 306 aa8.52□□□□□ -1.05
UBFD1-204ENST00000565634 AAASQ9NRG9 546 aa8.52□□□□□ -1.05
UBFD1-204ENST00000565634 TNRC18O15417 2968 aaPredicted RBP8.52□□□□□ -1.05
UBFD1-204ENST00000565634 CD2BP2O95400 341 aaKnown RBP8.51□□□□□ -1.05
UBFD1-204ENST00000565634 ITPK1Q13572 414 aa8.51□□□□□ -1.05
UBFD1-204ENST00000565634 SLC12A5Q9H2X9 1139 aa8.51□□□□□ -1.05
UBFD1-204ENST00000565634 TOR4AQ9NXH8 423 aa8.51□□□□□ -1.05
UBFD1-204ENST00000565634 HSPA8P11142 646 aaKnown RBP8.5□□□□□ -1.05
UBFD1-204ENST00000565634 CD46P15529 392 aa8.5□□□□□ -1.05
UBFD1-204ENST00000565634 POLR3GLQ9BT43 218 aa8.5□□□□□ -1.05
UBFD1-204ENST00000565634 PIM2Q9P1W9 311 aa8.5□□□□□ -1.05
UBFD1-204ENST00000565634 WASHC2AQ641Q2 1341 aa8.5□□□□□ -1.05
UBFD1-204ENST00000565634 KTN1Q86UP2 1357 aaKnown RBP8.49□□□□□ -1.05
UBFD1-204ENST00000565634 GLTPD2A6NH11 291 aa8.49□□□□□ -1.05
UBFD1-204ENST00000565634 RGS19P49795 217 aa8.49□□□□□ -1.05
UBFD1-204ENST00000565634 TMF1P82094 1093 aa8.49□□□□□ -1.05
UBFD1-204ENST00000565634 MSS51Q4VC12 460 aa8.49□□□□□ -1.05
UBFD1-204ENST00000565634 DALRD3Q5D0E6 543 aaKnown RBP8.49□□□□□ -1.05
UBFD1-204ENST00000565634 NBPF6Q5VWK0 638 aa8.49□□□□□ -1.05
UBFD1-204ENST00000565634 PIGBQ92521 554 aa8.49□□□□□ -1.05
UBFD1-204ENST00000565634 DCAF5Q96JK2 942 aa8.49□□□□□ -1.05
UBFD1-204ENST00000565634 NBPF4Q96M43 638 aa8.49□□□□□ -1.05
UBFD1-204ENST00000565634 DACH1Q9UI36 760 aa8.49□□□□□ -1.05
UBFD1-204ENST00000565634 MAP2P11137 1827 aaKnown RBP8.49□□□□□ -1.05
UBFD1-204ENST00000565634 MEGF6O75095 1541 aa8.49□□□□□ -1.05
UBFD1-204ENST00000565634 MYH14Q7Z406 1995 aaKnown RBP8.48□□□□□ -1.05
UBFD1-204ENST00000565634 IRF6O14896 467 aa8.48□□□□□ -1.05
UBFD1-204ENST00000565634 MAP2K5Q13163 448 aa8.48□□□□□ -1.05
UBFD1-204ENST00000565634 IP6K1Q92551 441 aa8.48□□□□□ -1.05
UBFD1-204ENST00000565634 CCDC87Q9NVE4 849 aa8.48□□□□□ -1.05
UBFD1-204ENST00000565634 ASAP1Q9ULH1 1129 aa8.48□□□□□ -1.05
UBFD1-204ENST00000565634 KIF7Q2M1P5 1343 aa8.48□□□□□ -1.05
UBFD1-204ENST00000565634 PLEKHG2Q9H7P9 1386 aa8.48□□□□□ -1.05
UBFD1-204ENST00000565634 LOC102724428A0A0B4J2F2 783 aa8.47□□□□□ -1.05
UBFD1-204ENST00000565634 SSFA2P28290 1259 aa8.47□□□□□ -1.05
UBFD1-204ENST00000565634 SIK1P57059 783 aa8.47□□□□□ -1.05
UBFD1-204ENST00000565634 GRM1Q13255 1194 aa8.47□□□□□ -1.05
UBFD1-204ENST00000565634 TRAPPC3LQ5T215 181 aa8.47□□□□□ -1.05
UBFD1-204ENST00000565634 CARD14Q9BXL6 1004 aa8.47□□□□□ -1.05
UBFD1-204ENST00000565634 PARP3Q9Y6F1 533 aa8.47□□□□□ -1.05
UBFD1-204ENST00000565634 TTC21AQ8NDW8 1320 aa8.47□□□□□ -1.05
UBFD1-204ENST00000565634 CNTNAP1P78357 1384 aa8.47□□□□□ -1.05
UBFD1-204ENST00000565634 FAM208AQ9UK61 1670 aaKnown RBP8.46□□□□□ -1.05
UBFD1-204ENST00000565634 AVPP01185 164 aa8.46□□□□□ -1.06
UBFD1-204ENST00000565634 GRIPAP1Q4V328 841 aa8.46□□□□□ -1.06
UBFD1-204ENST00000565634 TMC1Q8TDI8 760 aa8.46□□□□□ -1.06
UBFD1-204ENST00000565634 HLA-CQ95604 372 aa8.46□□□□□ -1.06
UBFD1-204ENST00000565634 SRP68Q9UHB9 627 aaKnown RBP8.46□□□□□ -1.06
UBFD1-204ENST00000565634 EVC2Q86UK5 1308 aa8.46□□□□□ -1.06
UBFD1-204ENST00000565634 C4AP0C0L4 1744 aa8.46□□□□□ -1.06
UBFD1-204ENST00000565634 C10orf71Q711Q0 1435 aa8.46□□□□□ -1.06
UBFD1-204ENST00000565634 CYP27B1O15528 508 aa8.45□□□□□ -1.06
UBFD1-204ENST00000565634 DDNO94850 711 aaPredicted RBP8.45□□□□□ -1.06
UBFD1-204ENST00000565634 GYS1P13807 737 aa8.45□□□□□ -1.06
UBFD1-204ENST00000565634 AMPHP49418 695 aa8.45□□□□□ -1.06
UBFD1-204ENST00000565634 MMP16P51512 607 aa8.45□□□□□ -1.06
UBFD1-204ENST00000565634 MDM2Q00987 491 aaPredicted RBP8.45□□□□□ -1.06
UBFD1-204ENST00000565634 DDX10Q13206 875 aaKnown RBP8.45□□□□□ -1.06
UBFD1-204ENST00000565634 CYP4X1Q8N118 509 aa8.45□□□□□ -1.06
UBFD1-204ENST00000565634 CRIPAKQ8N1N5 446 aa8.45□□□□□ -1.06
UBFD1-204ENST00000565634 NLGN1Q8N2Q7 840 aa8.45□□□□□ -1.06
UBFD1-204ENST00000565634 TIAM2Q8IVF5 1701 aa8.45□□□□□ -1.06
UBFD1-204ENST00000565634 DICER1Q9UPY3 1922 aaKnown RBP8.44□□□□□ -1.06
UBFD1-204ENST00000565634 KDM4AO75164 1064 aa8.44□□□□□ -1.06
UBFD1-204ENST00000565634 HOXC9P31274 260 aa8.44□□□□□ -1.06
UBFD1-204ENST00000565634 FMR1Q06787 632 aaKnown RBP eCLIP8.44□□□□□ -1.066e-7■■□□□ 13.9
UBFD1-204ENST00000565634 Q3C1V9 767 aa8.44□□□□□ -1.06
UBFD1-204ENST00000565634 SMARCC1Q92922 1105 aaPredicted RBP8.44□□□□□ -1.06
UBFD1-204ENST00000565634 MON2Q7Z3U7 1717 aa8.43□□□□□ -1.06
UBFD1-204ENST00000565634 AFDNP55196 1824 aaKnown RBP8.43□□□□□ -1.06
UBFD1-204ENST00000565634 CACNA1SQ13698 1873 aa8.43□□□□□ -1.06
UBFD1-204ENST00000565634 ZBTB24O43167 697 aaPredicted RBP8.43□□□□□ -1.06
UBFD1-204ENST00000565634 TATP17735 454 aaPredicted RBP8.43□□□□□ -1.06
UBFD1-204ENST00000565634 LMNB1P20700 586 aa8.43□□□□□ -1.06
UBFD1-204ENST00000565634 RFC4P35249 363 aa8.43□□□□□ -1.06
UBFD1-204ENST00000565634 DDR1Q08345 913 aa8.43□□□□□ -1.06
UBFD1-204ENST00000565634 CNGB1Q14028 1251 aaPredicted RBP8.43□□□□□ -1.06
UBFD1-204ENST00000565634 RRS1Q15050 365 aaKnown RBP8.43□□□□□ -1.06
UBFD1-204ENST00000565634 DEFB115Q30KQ5 88 aa8.43□□□□□ -1.06
UBFD1-204ENST00000565634 RAPGEF4Q8WZA2 1011 aa8.43□□□□□ -1.06
UBFD1-204ENST00000565634 SLC4A9Q96Q91 983 aa8.43□□□□□ -1.06
UBFD1-204ENST00000565634 MCOLN1Q9GZU1 580 aa8.43□□□□□ -1.06
UBFD1-204ENST00000565634 PANK3Q9H999 370 aa8.43□□□□□ -1.06
UBFD1-204ENST00000565634 RTCBQ9Y3I0 505 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms