RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	RTL5	Q5HYW3	569 aa	Predicted RBP	12.27	□□□□□ -0.45
SIN3A-205	ENST00000564778	PRR5L	Q6MZQ0	368 aa		12.27	□□□□□ -0.45
SIN3A-205	ENST00000564778	NUTM1	Q86Y26	1132 aa		12.27	□□□□□ -0.45
SIN3A-205	ENST00000564778	SMC5	Q8IY18	1101 aa		12.27	□□□□□ -0.45
SIN3A-205	ENST00000564778	ANKRD31	Q8N7Z5	1873 aa		12.26	□□□□□ -0.45
SIN3A-205	ENST00000564778	FAM177B	A6PVY3	158 aa		12.26	□□□□□ -0.45
SIN3A-205	ENST00000564778	RFX5	P48382	616 aa	Predicted RBP	12.26	□□□□□ -0.45
SIN3A-205	ENST00000564778	SF3B3	Q15393	1217 aa	Known RBP	12.26	□□□□□ -0.45
SIN3A-205	ENST00000564778	LMBR1L	Q6UX01	489 aa		12.26	□□□□□ -0.45
SIN3A-205	ENST00000564778	TTLL11	Q8NHH1	800 aa		12.26	□□□□□ -0.45
SIN3A-205	ENST00000564778	GCC1	Q96CN9	775 aa		12.26	□□□□□ -0.45
SIN3A-205	ENST00000564778	DCTPP1	Q9H773	170 aa		12.26	□□□□□ -0.45
SIN3A-205	ENST00000564778	DCAF8L1	A6NGE4	600 aa		12.25	□□□□□ -0.45
SIN3A-205	ENST00000564778	HCLS1	P14317	486 aa	Predicted RBP	12.25	□□□□□ -0.45
SIN3A-205	ENST00000564778	ST5	P78524	1137 aa		12.25	□□□□□ -0.45
SIN3A-205	ENST00000564778	FAM161A	Q3B820	660 aa		12.25	□□□□□ -0.45
SIN3A-205	ENST00000564778	MSL1	Q68DK7	614 aa		12.25	□□□□□ -0.45
SIN3A-205	ENST00000564778	SGIP1	Q9BQI5	828 aa		12.25	□□□□□ -0.45
SIN3A-205	ENST00000564778	COPRS	Q9NQ92	184 aa		12.25	□□□□□ -0.45
SIN3A-205	ENST00000564778	NOP58	Q9Y2X3	529 aa	Known RBP	12.25	□□□□□ -0.45
SIN3A-205	ENST00000564778	PARP3	Q9Y6F1	533 aa		12.25	□□□□□ -0.45
SIN3A-205	ENST00000564778	KLRG2	A4D1S0	409 aa	Predicted RBP	12.24	□□□□□ -0.45
SIN3A-205	ENST00000564778	GTF2E1	P29083	439 aa	Predicted RBP	12.24	□□□□□ -0.45
SIN3A-205	ENST00000564778	CRY2	Q49AN0	593 aa		12.24	□□□□□ -0.45
SIN3A-205	ENST00000564778	CCDC152	Q4G0S7	254 aa		12.24	□□□□□ -0.45
SIN3A-205	ENST00000564778	C3orf67	Q6ZVT6	689 aa		12.24	□□□□□ -0.45
SIN3A-205	ENST00000564778	C10orf71	Q711Q0	1435 aa		12.24	□□□□□ -0.45
SIN3A-205	ENST00000564778	GREM2	Q9H772	168 aa		12.24	□□□□□ -0.45
SIN3A-205	ENST00000564778	PTPN12	Q05209	780 aa	Known RBP	12.23	□□□□□ -0.45
SIN3A-205	ENST00000564778	NLRP3	Q96P20	1036 aa		12.23	□□□□□ -0.45
SIN3A-205	ENST00000564778	FBXO3	Q9UK99	471 aa		12.23	□□□□□ -0.45
SIN3A-205	ENST00000564778	KIF13B	Q9NQT8	1826 aa		12.23	□□□□□ -0.45
SIN3A-205	ENST00000564778	COL11A2	P13942	1736 aa	Predicted RBP	12.23	□□□□□ -0.45
SIN3A-205	ENST00000564778	NPHP1	O15259	732 aa		12.22	□□□□□ -0.45
SIN3A-205	ENST00000564778	ITGA6	P23229	1130 aa		12.22	□□□□□ -0.45
SIN3A-205	ENST00000564778	IFIT5	Q13325	482 aa	Known RBP	12.22	□□□□□ -0.45
SIN3A-205	ENST00000564778	HSP90AB4P	Q58FF6	505 aa		12.22	□□□□□ -0.45
SIN3A-205	ENST00000564778	BRIP1	Q9BX63	1249 aa		12.22	□□□□□ -0.45
SIN3A-205	ENST00000564778	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.22	□□□□□ -0.45
SIN3A-205	ENST00000564778	CHMP3	Q9Y3E7	222 aa		12.22	□□□□□ -0.45
SIN3A-205	ENST00000564778	ANKRD18B	A2A2Z9	1011 aa		12.21	□□□□□ -0.45
SIN3A-205	ENST00000564778	RAB11FIP3	O75154	756 aa		12.21	□□□□□ -0.45
SIN3A-205	ENST00000564778	CIAO1	O76071	339 aa		12.21	□□□□□ -0.45
SIN3A-205	ENST00000564778	CCDC57	Q2TAC2	916 aa		12.21	□□□□□ -0.45
SIN3A-205	ENST00000564778	PA2G4	Q9UQ80	394 aa	Known RBP	12.21	□□□□□ -0.45
SIN3A-205	ENST00000564778	COL4A1	P02462	1669 aa		12.21	□□□□□ -0.45
SIN3A-205	ENST00000564778	SURF6	O75683	361 aa	Known RBP	12.2	□□□□□ -0.46
SIN3A-205	ENST00000564778	HOXA10	P31260	410 aa	Predicted RBP	12.2	□□□□□ -0.46
SIN3A-205	ENST00000564778	NUCB1	Q02818	461 aa		12.2	□□□□□ -0.46
SIN3A-205	ENST00000564778	ERC1	Q8IUD2	1116 aa		12.2	□□□□□ -0.46
SIN3A-205	ENST00000564778	CCDC24	Q8N4L8	307 aa		12.2	□□□□□ -0.46
SIN3A-205	ENST00000564778	KLHDC4	Q8TBB5	520 aa		12.2	□□□□□ -0.46
SIN3A-205	ENST00000564778	SYT17	Q9BSW7	474 aa		12.2	□□□□□ -0.46
SIN3A-205	ENST00000564778	EXOC6B	Q9Y2D4	811 aa		12.2	□□□□□ -0.46
SIN3A-205	ENST00000564778	DLEC1	Q9Y238	1755 aa		12.2	□□□□□ -0.46
SIN3A-205	ENST00000564778	EYA2	O00167	538 aa		12.19	□□□□□ -0.46
SIN3A-205	ENST00000564778	PDE6B	P35913	854 aa		12.19	□□□□□ -0.46
SIN3A-205	ENST00000564778	KLHL34	Q8N239	644 aa		12.19	□□□□□ -0.46
SIN3A-205	ENST00000564778	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.19	□□□□□ -0.46
SIN3A-205	ENST00000564778	CDC5L	Q99459	802 aa	Known RBP	12.19	□□□□□ -0.46
SIN3A-205	ENST00000564778	PDZRN3	Q9UPQ7	1066 aa		12.19	□□□□□ -0.46
SIN3A-205	ENST00000564778		A0A1B0GUL6	1792 aa		12.19	□□□□□ -0.46
SIN3A-205	ENST00000564778	SPEF2	Q9C093	1822 aa		12.18	□□□□□ -0.46
SIN3A-205	ENST00000564778	LRRC37A	A6NMS7	1700 aa		12.18	□□□□□ -0.46
SIN3A-205	ENST00000564778	KIAA1551	Q9HCM1	1747 aa		12.18	□□□□□ -0.46
SIN3A-205	ENST00000564778	IL15	P40933	162 aa	Predicted RBP	12.18	□□□□□ -0.46
SIN3A-205	ENST00000564778	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.18	□□□□□ -0.46
SIN3A-205	ENST00000564778	ATG9A	Q7Z3C6	839 aa		12.18	□□□□□ -0.46
SIN3A-205	ENST00000564778	KIF1BP	Q96EK5	621 aa		12.18	□□□□□ -0.46
SIN3A-205	ENST00000564778	ZNF594	Q96JF6	807 aa	Predicted RBP	12.18	□□□□□ -0.46
SIN3A-205	ENST00000564778	LRRCC1	Q9C099	1032 aa		12.18	□□□□□ -0.46
SIN3A-205	ENST00000564778	SEC31B	Q9NQW1	1179 aa		12.18	□□□□□ -0.46
SIN3A-205	ENST00000564778	SASH1	O94885	1247 aa		12.17	□□□□□ -0.46
SIN3A-205	ENST00000564778	GRAP	Q13588	217 aa		12.17	□□□□□ -0.46
SIN3A-205	ENST00000564778	TAF7L	Q5H9L4	462 aa		12.17	□□□□□ -0.46
SIN3A-205	ENST00000564778	DDX46	Q7L014	1031 aa	Known RBP	12.17	□□□□□ -0.46
SIN3A-205	ENST00000564778	CHD1L	Q86WJ1	897 aa		12.17	□□□□□ -0.46
SIN3A-205	ENST00000564778	GRAPL	Q8TC17	118 aa	Predicted RBP	12.17	□□□□□ -0.46
SIN3A-205	ENST00000564778	RHPN1	Q8TCX5	695 aa		12.17	□□□□□ -0.46
SIN3A-205	ENST00000564778	RPGR	Q92834	1020 aa	Known RBP	12.17	□□□□□ -0.46
SIN3A-205	ENST00000564778	SIL1	Q9H173	461 aa		12.17	□□□□□ -0.46
SIN3A-205	ENST00000564778	RIPOR2	Q9Y4F9	1068 aa		12.17	□□□□□ -0.46
SIN3A-205	ENST00000564778	TAF1	P21675	1872 aa		12.17	□□□□□ -0.46
SIN3A-205	ENST00000564778	SRGN	P10124	158 aa		12.16	□□□□□ -0.46
SIN3A-205	ENST00000564778	IGHMBP2	P38935	993 aa	Known RBP	12.16	□□□□□ -0.46
SIN3A-205	ENST00000564778	OS9	Q13438	667 aa	Predicted RBP	12.16	□□□□□ -0.46
SIN3A-205	ENST00000564778	LRRC24	Q50LG9	513 aa		12.16	□□□□□ -0.46
SIN3A-205	ENST00000564778	ANKRD18A	Q8IVF6	992 aa		12.16	□□□□□ -0.46
SIN3A-205	ENST00000564778	CELF1	Q92879	486 aa	Known RBP	12.16	□□□□□ -0.46
SIN3A-205	ENST00000564778	RBM17	Q96I25	401 aa	Known RBP	12.16	□□□□□ -0.46
SIN3A-205	ENST00000564778	CRAMP1	Q96RY5	1269 aa		12.16	□□□□□ -0.46
SIN3A-205	ENST00000564778	BSDC1	Q9NW68	430 aa	Predicted RBP	12.16	□□□□□ -0.46
SIN3A-205	ENST00000564778	ZNF609	O15014	1411 aa		12.16	□□□□□ -0.46
SIN3A-205	ENST00000564778	MROH5	Q6ZUA9	1318 aa		12.15	□□□□□ -0.46
SIN3A-205	ENST00000564778	NPR1	P16066	1061 aa		12.15	□□□□□ -0.46
SIN3A-205	ENST00000564778	RPS8	P62241	208 aa	Known RBP	12.15	□□□□□ -0.46
SIN3A-205	ENST00000564778	ANKRD45	Q5TZF3	282 aa		12.15	□□□□□ -0.46
SIN3A-205	ENST00000564778	LDHAL6A	Q6ZMR3	332 aa		12.15	□□□□□ -0.46
SIN3A-205	ENST00000564778	TMC4	Q7Z404	712 aa		12.15	□□□□□ -0.46
SIN3A-205	ENST00000564778	VGLL2	Q8N8G2	317 aa		12.15	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms