RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 GNAI1P63096 354 aa24.52■■□□□ 1.52
NME3-207ENST00000564628 AOC3Q16853 763 aa24.52■■□□□ 1.52
NME3-207ENST00000564628 PROSER3Q2NL68 480 aa24.52■■□□□ 1.52
NME3-207ENST00000564628 ADARB2Q9NS39 739 aaKnown RBP24.51■■□□□ 1.51
NME3-207ENST00000564628 GPRC5DQ9NZD1 345 aa24.51■■□□□ 1.51
NME3-207ENST00000564628 ZNRF3Q9ULT6 936 aa24.51■■□□□ 1.51
NME3-207ENST00000564628 HSPA8P11142 646 aaKnown RBP24.5■■□□□ 1.51
NME3-207ENST00000564628 KRT24Q2M2I5 525 aa24.5■■□□□ 1.51
NME3-207ENST00000564628 SP8Q8IXZ3 490 aa24.5■■□□□ 1.51
NME3-207ENST00000564628 ANXA1P04083 346 aa24.49■■□□□ 1.51
NME3-207ENST00000564628 HOXB7P09629 217 aa24.49■■□□□ 1.51
NME3-207ENST00000564628 ECE1P42892 770 aa24.49■■□□□ 1.51
NME3-207ENST00000564628 CXCL9Q07325 125 aa24.49■■□□□ 1.51
NME3-207ENST00000564628 COPS6Q7L5N1 327 aa24.49■■□□□ 1.51
NME3-207ENST00000564628 NLRP10Q86W26 655 aa24.49■■□□□ 1.51
NME3-207ENST00000564628 IL16Q14005 1332 aa24.49■■□□□ 1.51
NME3-207ENST00000564628 CDHR2Q9BYE9 1310 aa24.49■■□□□ 1.51
NME3-207ENST00000564628 TRPM7Q96QT4 1865 aa24.49■■□□□ 1.51
NME3-207ENST00000564628 LAMB2P55268 1798 aa24.48■■□□□ 1.51
NME3-207ENST00000564628 CST9Q5W186 159 aa24.48■■□□□ 1.51
NME3-207ENST00000564628 DPP8Q6V1X1 898 aaPredicted RBP24.48■■□□□ 1.51
NME3-207ENST00000564628 FMR1Q06787 632 aaKnown RBP eCLIP24.47■■□□□ 1.518e-6■■□□□ 11.8
NME3-207ENST00000564628 KIAA2012Q0VF49 1180 aa24.47■■□□□ 1.51
NME3-207ENST00000564628 TCIRG1Q13488 830 aa24.47■■□□□ 1.51
NME3-207ENST00000564628 MPNDQ8N594 471 aa24.47■■□□□ 1.51
NME3-207ENST00000564628 XAGE3Q8WTP9 111 aa24.47■■□□□ 1.51
NME3-207ENST00000564628 CAPNS2Q96L46 248 aa24.47■■□□□ 1.51
NME3-207ENST00000564628 SH3TC1Q8TE82 1336 aa24.46■■□□□ 1.51
NME3-207ENST00000564628 TRAF5O00463 557 aa24.46■■□□□ 1.51
NME3-207ENST00000564628 DDX46Q7L014 1031 aaKnown RBP24.46■■□□□ 1.51
NME3-207ENST00000564628 TLL2Q9Y6L7 1015 aa24.46■■□□□ 1.51
NME3-207ENST00000564628 HCLS1P14317 486 aaPredicted RBP24.45■■□□□ 1.5
NME3-207ENST00000564628 AIMP1Q12904 312 aaKnown RBP24.45■■□□□ 1.5
NME3-207ENST00000564628 TMC4Q7Z404 712 aa24.45■■□□□ 1.5
NME3-207ENST00000564628 TRMT112Q9UI30 125 aaKnown RBP24.45■■□□□ 1.5
NME3-207ENST00000564628 GMPSP49915 693 aaPredicted RBP24.44■■□□□ 1.5
NME3-207ENST00000564628 GRAPQ13588 217 aa24.44■■□□□ 1.5
NME3-207ENST00000564628 CIAPIN1Q6FI81 312 aa24.44■■□□□ 1.5
NME3-207ENST00000564628 WDR63Q8IWG1 891 aa24.44■■□□□ 1.5
NME3-207ENST00000564628 GRAPLQ8TC17 118 aaPredicted RBP24.44■■□□□ 1.5
NME3-207ENST00000564628 GPR101Q96P66 508 aaPredicted RBP24.44■■□□□ 1.5
NME3-207ENST00000564628 PGAP2Q9UHJ9 254 aa24.44■■□□□ 1.5
NME3-207ENST00000564628 TNIP1Q15025 636 aa24.43■■□□□ 1.5
NME3-207ENST00000564628 DUSP27Q5VZP5 1158 aa24.43■■□□□ 1.5
NME3-207ENST00000564628 CYP4F22Q6NT55 531 aa24.43■■□□□ 1.5
NME3-207ENST00000564628 PAXIP1Q6ZW49 1069 aaPredicted RBP24.43■■□□□ 1.5
NME3-207ENST00000564628 ZC3H15Q8WU90 426 aaKnown RBP24.43■■□□□ 1.5
NME3-207ENST00000564628 NECTIN2Q92692 538 aa24.43■■□□□ 1.5
NME3-207ENST00000564628 BEGAINQ9BUH8 593 aa24.43■■□□□ 1.5
NME3-207ENST00000564628 LRRC37AA6NMS7 1700 aa24.41■■□□□ 1.5
NME3-207ENST00000564628 ZNF521Q96K83 1311 aa24.41■■□□□ 1.5
NME3-207ENST00000564628 MAP2K2P36507 400 aa24.41■■□□□ 1.5
NME3-207ENST00000564628 MIER1Q8N108 512 aa24.41■■□□□ 1.5
NME3-207ENST00000564628 HHIPL1Q96JK4 782 aa24.41■■□□□ 1.5
NME3-207ENST00000564628 HDGFL1Q5TGJ6 251 aa24.4■■□□□ 1.5
NME3-207ENST00000564628 SAPCD2Q86UD0 394 aa24.4■■□□□ 1.5
NME3-207ENST00000564628 TSR2Q969E8 191 aaKnown RBP24.4■■□□□ 1.5
NME3-207ENST00000564628 BCL2L13Q9BXK5 485 aa24.4■■□□□ 1.5
NME3-207ENST00000564628 SALL2Q9Y467 1007 aaPredicted RBP24.4■■□□□ 1.5
NME3-207ENST00000564628 DUOX1Q9NRD9 1551 aa24.4■■□□□ 1.5
NME3-207ENST00000564628 RAD17O75943 681 aa24.39■■□□□ 1.49
NME3-207ENST00000564628 C8orf58Q8NAV2 365 aa24.39■■□□□ 1.49
NME3-207ENST00000564628 PLBD2Q8NHP8 589 aa24.39■■□□□ 1.49
NME3-207ENST00000564628 ABHD8Q96I13 439 aa24.39■■□□□ 1.49
NME3-207ENST00000564628 CHPF2Q9P2E5 772 aa24.39■■□□□ 1.49
NME3-207ENST00000564628 CELF2O95319 508 aaKnown RBP24.38■■□□□ 1.49
NME3-207ENST00000564628 GRM1Q13255 1194 aa24.38■■□□□ 1.49
NME3-207ENST00000564628 GLIS2Q9BZE0 524 aaPredicted RBP24.38■■□□□ 1.49
NME3-207ENST00000564628 FANCIQ9NVI1 1328 aa24.37■■□□□ 1.49
NME3-207ENST00000564628 YDJCA8MPS7 323 aa24.37■■□□□ 1.49
NME3-207ENST00000564628 HIRAP54198 1017 aaPredicted RBP24.37■■□□□ 1.49
NME3-207ENST00000564628 DDX60Q8IY21 1712 aaKnown RBP24.37■■□□□ 1.49
NME3-207ENST00000564628 SF3B3Q15393 1217 aaKnown RBP24.36■■□□□ 1.49
NME3-207ENST00000564628 ANKRD13DQ6ZTN6 518 aa24.36■■□□□ 1.49
NME3-207ENST00000564628 CDC37L1Q7L3B6 337 aa24.36■■□□□ 1.49
NME3-207ENST00000564628 ISCA1Q9BUE6 129 aa24.36■■□□□ 1.49
NME3-207ENST00000564628 DBF4Q9UBU7 674 aaPredicted RBP24.36■■□□□ 1.49
NME3-207ENST00000564628 CNOT7Q9UIV1 285 aaKnown RBP24.36■■□□□ 1.49
NME3-207ENST00000564628 TAF1P21675 1872 aa24.35■■□□□ 1.49
NME3-207ENST00000564628 TSPYL6Q8N831 410 aa24.35■■□□□ 1.49
NME3-207ENST00000564628 DPF2Q92785 391 aa24.35■■□□□ 1.49
NME3-207ENST00000564628 SPINK5Q9NQ38 1064 aaPredicted RBP24.35■■□□□ 1.49
NME3-207ENST00000564628 H7C1D1 291 aa24.34■■□□□ 1.49
NME3-207ENST00000564628 CA12O43570 354 aa24.34■■□□□ 1.49
NME3-207ENST00000564628 AOC2O75106 756 aa24.34■■□□□ 1.49
NME3-207ENST00000564628 TRPM4Q8TD43 1214 aa24.34■■□□□ 1.49
NME3-207ENST00000564628 CACNA1FO60840 1977 aa24.34■■□□□ 1.49
NME3-207ENST00000564628 ELL2O00472 640 aaPredicted RBP24.33■■□□□ 1.49
NME3-207ENST00000564628 WASHC4Q2M389 1173 aa24.33■■□□□ 1.49
NME3-207ENST00000564628 FAM89AQ96GI7 184 aa24.33■■□□□ 1.49
NME3-207ENST00000564628 BRPF1P55201 1214 aaPredicted RBP24.32■■□□□ 1.48
NME3-207ENST00000564628 MICALL2Q8IY33 904 aa24.32■■□□□ 1.48
NME3-207ENST00000564628 CELF1Q92879 486 aaKnown RBP24.32■■□□□ 1.48
NME3-207ENST00000564628 HYPKQ9NX55 129 aa24.32■■□□□ 1.48
NME3-207ENST00000564628 NSFL1CQ9UNZ2 370 aaKnown RBP24.32■■□□□ 1.48
NME3-207ENST00000564628 TRIM28Q13263 835 aaKnown RBP24.31■■□□□ 1.48
NME3-207ENST00000564628 CHMP4AQ9BY43 222 aa24.3■■□□□ 1.48
NME3-207ENST00000564628 ZNF408Q9H9D4 720 aa24.3■■□□□ 1.48
NME3-207ENST00000564628 SHTN1A0MZ66 631 aa24.29■■□□□ 1.48
NME3-207ENST00000564628 ATP5J2-PTCD1G3V325 749 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms