RNA–Protein interactions for RNA: ENST00000564070.1

SPSB3-205, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-205ENST00000564070 FSTL1Q12841 308 aa20.43■□□□□ 0.86
SPSB3-205ENST00000564070 CWF19L2Q2TBE0 894 aaKnown RBP20.43■□□□□ 0.86
SPSB3-205ENST00000564070 GRIPAP1Q4V328 841 aa20.43■□□□□ 0.86
SPSB3-205ENST00000564070 CDHR2Q9BYE9 1310 aa20.43■□□□□ 0.86
SPSB3-205ENST00000564070 FKBP4Q02790 459 aaKnown RBP eCLIP20.42■□□□□ 0.86
SPSB3-205ENST00000564070 OLFM4Q6UX06 510 aa20.42■□□□□ 0.86
SPSB3-205ENST00000564070 LINS1Q8NG48 757 aa20.42■□□□□ 0.86
SPSB3-205ENST00000564070 PCNTO95613 3336 aa20.42■□□□□ 0.86
SPSB3-205ENST00000564070 PDE8AO60658 829 aa20.41■□□□□ 0.86
SPSB3-205ENST00000564070 BBOX1O75936 387 aa20.41■□□□□ 0.86
SPSB3-205ENST00000564070 VEGFAP15692 232 aaPredicted RBP20.41■□□□□ 0.86
SPSB3-205ENST00000564070 HNRNPUQ00839 825 aaKnown RBP eCLIP20.41■□□□□ 0.86
SPSB3-205ENST00000564070 GRAPQ13588 217 aa20.41■□□□□ 0.86
SPSB3-205ENST00000564070 MRPL50Q8N5N7 158 aaKnown RBP20.41■□□□□ 0.86
SPSB3-205ENST00000564070 GRAPLQ8TC17 118 aaPredicted RBP20.41■□□□□ 0.86
SPSB3-205ENST00000564070 WDR90Q96KV7 1748 aa20.41■□□□□ 0.86
SPSB3-205ENST00000564070 GCKRQ14397 625 aa20.4■□□□□ 0.86
SPSB3-205ENST00000564070 ALDH1L2Q3SY69 923 aa20.4■□□□□ 0.86
SPSB3-205ENST00000564070 PSMD1Q99460 953 aa20.4■□□□□ 0.86
SPSB3-205ENST00000564070 TMX4Q9H1E5 349 aaPredicted RBP20.4■□□□□ 0.86
SPSB3-205ENST00000564070 DICER1Q9UPY3 1922 aaKnown RBP20.4■□□□□ 0.86
SPSB3-205ENST00000564070 ATP6V0A2Q9Y487 856 aa20.4■□□□□ 0.86
SPSB3-205ENST00000564070 F6X3S4 739 aa20.39■□□□□ 0.85
SPSB3-205ENST00000564070 TMC4Q7Z404 712 aa20.39■□□□□ 0.85
SPSB3-205ENST00000564070 SSH1Q8WYL5 1049 aa20.39■□□□□ 0.85
SPSB3-205ENST00000564070 PTPRCP08575 1304 aa20.38■□□□□ 0.85
SPSB3-205ENST00000564070 H7C1W4 665 aa20.38■□□□□ 0.85
SPSB3-205ENST00000564070 BEND3Q5T5X7 828 aa20.38■□□□□ 0.85
SPSB3-205ENST00000564070 SMC1BQ8NDV3 1235 aa20.38■□□□□ 0.85
SPSB3-205ENST00000564070 JARID2Q92833 1246 aaPredicted RBP20.38■□□□□ 0.85
SPSB3-205ENST00000564070 LRRC37AA6NMS7 1700 aa20.37■□□□□ 0.85
SPSB3-205ENST00000564070 DDNO94850 711 aaPredicted RBP20.37■□□□□ 0.85
SPSB3-205ENST00000564070 CCDC152Q4G0S7 254 aa20.37■□□□□ 0.85
SPSB3-205ENST00000564070 IFFO2Q5TF58 517 aa20.37■□□□□ 0.85
SPSB3-205ENST00000564070 SP8Q8IXZ3 490 aa20.37■□□□□ 0.85
SPSB3-205ENST00000564070 UBE3BQ7Z3V4 1068 aa20.36■□□□□ 0.85
SPSB3-205ENST00000564070 ZNF277Q9NRM2 450 aaPredicted RBP20.36■□□□□ 0.85
SPSB3-205ENST00000564070 IARSP41252 1262 aaKnown RBP20.35■□□□□ 0.85
SPSB3-205ENST00000564070 CTSWP56202 376 aa20.35■□□□□ 0.85
SPSB3-205ENST00000564070 DPY19L2Q6NUT2 758 aa20.35■□□□□ 0.85
SPSB3-205ENST00000564070 SLC51AQ86UW1 340 aa20.35■□□□□ 0.85
SPSB3-205ENST00000564070 CELF1Q92879 486 aaKnown RBP20.35■□□□□ 0.85
SPSB3-205ENST00000564070 KLRG1Q96E93 195 aa20.35■□□□□ 0.85
SPSB3-205ENST00000564070 BCL2L13Q9BXK5 485 aa20.35■□□□□ 0.85
SPSB3-205ENST00000564070 SMC4Q9NTJ3 1288 aa20.35■□□□□ 0.85
SPSB3-205ENST00000564070 TAF1P21675 1872 aa20.35■□□□□ 0.85
SPSB3-205ENST00000564070 MYH3P11055 1940 aa20.34■□□□□ 0.85
SPSB3-205ENST00000564070 POTEIP0CG38 1075 aa20.34■□□□□ 0.85
SPSB3-205ENST00000564070 POTEJP0CG39 1038 aa20.34■□□□□ 0.85
SPSB3-205ENST00000564070 CASP7P55210 303 aa20.34■□□□□ 0.85
SPSB3-205ENST00000564070 PLA2G12BQ9BX93 195 aa20.34■□□□□ 0.85
SPSB3-205ENST00000564070 ZBED9Q6R2W3 1325 aa20.33■□□□□ 0.85
SPSB3-205ENST00000564070 COL4A1P02462 1669 aa20.33■□□□□ 0.85
SPSB3-205ENST00000564070 ALDH1L1O75891 902 aa20.33■□□□□ 0.85
SPSB3-205ENST00000564070 SLC4A10Q6U841 1118 aa20.33■□□□□ 0.85
SPSB3-205ENST00000564070 SRCIN1Q9C0H9 1055 aa20.33■□□□□ 0.85
SPSB3-205ENST00000564070 RTL9Q8NET4 1388 aa20.33■□□□□ 0.84
SPSB3-205ENST00000564070 RPS8P62241 208 aaKnown RBP20.32■□□□□ 0.84
SPSB3-205ENST00000564070 DPP8Q6V1X1 898 aaPredicted RBP20.32■□□□□ 0.84
SPSB3-205ENST00000564070 SUPT20HQ8NEM7 779 aa20.32■□□□□ 0.84
SPSB3-205ENST00000564070 TTLL11Q8NHH1 800 aa20.32■□□□□ 0.84
SPSB3-205ENST00000564070 RTFDC1Q9BY42 306 aaPredicted RBP20.32■□□□□ 0.84
SPSB3-205ENST00000564070 VPS33BQ9H267 617 aa20.32■□□□□ 0.84
SPSB3-205ENST00000564070 SEC31BQ9NQW1 1179 aa20.32■□□□□ 0.84
SPSB3-205ENST00000564070 BRPF1P55201 1214 aaPredicted RBP20.31■□□□□ 0.84
SPSB3-205ENST00000564070 MPNDQ8N594 471 aa20.31■□□□□ 0.84
SPSB3-205ENST00000564070 GRM8O00222 908 aa20.3■□□□□ 0.84
SPSB3-205ENST00000564070 CCDC85AQ96PX6 553 aaPredicted RBP20.3■□□□□ 0.84
SPSB3-205ENST00000564070 CDC5LQ99459 802 aaKnown RBP20.3■□□□□ 0.84
SPSB3-205ENST00000564070 ZNF541Q9H0D2 1346 aa20.29■□□□□ 0.84
SPSB3-205ENST00000564070 RARSP54136 660 aaKnown RBP20.29■□□□□ 0.84
SPSB3-205ENST00000564070 JDP2Q8WYK2 163 aa20.29■□□□□ 0.84
SPSB3-205ENST00000564070 GREM2Q9H772 168 aa20.29■□□□□ 0.84
SPSB3-205ENST00000564070 DUOX1Q9NRD9 1551 aa20.29■□□□□ 0.84
SPSB3-205ENST00000564070 LTBP1Q14766 1721 aa20.28■□□□□ 0.84
SPSB3-205ENST00000564070 CSF1RP07333 972 aa20.28■□□□□ 0.84
SPSB3-205ENST00000564070 ANKRD18AQ8IVF6 992 aa20.28■□□□□ 0.84
SPSB3-205ENST00000564070 LARGE2Q8N3Y3 721 aa20.28■□□□□ 0.84
SPSB3-205ENST00000564070 JMYQ8N9B5 988 aa20.28■□□□□ 0.84
SPSB3-205ENST00000564070 C9orf78Q9NZ63 289 aaPredicted RBP20.28■□□□□ 0.84
SPSB3-205ENST00000564070 COL4A5P29400 1685 aa20.28■□□□□ 0.84
SPSB3-205ENST00000564070 FZD9O00144 591 aa20.27■□□□□ 0.84
SPSB3-205ENST00000564070 PPIP5K2O43314 1243 aa20.27■□□□□ 0.84
SPSB3-205ENST00000564070 KIF16BQ96L93 1317 aa20.27■□□□□ 0.83
SPSB3-205ENST00000564070 AOC3Q16853 763 aa20.26■□□□□ 0.83
SPSB3-205ENST00000564070 NOB1Q9ULX3 412 aaKnown RBP20.26■□□□□ 0.83
SPSB3-205ENST00000564070 NSFL1CQ9UNZ2 370 aaKnown RBP20.26■□□□□ 0.83
SPSB3-205ENST00000564070 UTYO14607 1347 aa20.26■□□□□ 0.83
SPSB3-205ENST00000564070 GPSM2P81274 684 aa20.25■□□□□ 0.83
SPSB3-205ENST00000564070 FOXO4P98177 505 aa20.25■□□□□ 0.83
SPSB3-205ENST00000564070 KIAA2012Q0VF49 1180 aa20.25■□□□□ 0.83
SPSB3-205ENST00000564070 CHADLQ6NUI6 762 aa20.25■□□□□ 0.83
SPSB3-205ENST00000564070 NIM1KQ8IY84 436 aa20.25■□□□□ 0.83
SPSB3-205ENST00000564070 API5Q9BZZ5 524 aaKnown RBP20.25■□□□□ 0.83
SPSB3-205ENST00000564070 PODXL2Q9NZ53 605 aa20.25■□□□□ 0.83
SPSB3-205ENST00000564070 ITGA6P23229 1130 aa20.24■□□□□ 0.83
SPSB3-205ENST00000564070 FAM161AQ3B820 660 aa20.24■□□□□ 0.83
SPSB3-205ENST00000564070 TAF1DQ9H5J8 278 aaPredicted RBP20.24■□□□□ 0.83
SPSB3-205ENST00000564070 BSDC1Q9NW68 430 aaPredicted RBP20.24■□□□□ 0.83
SPSB3-205ENST00000564070 IGHMBP2P38935 993 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 186.7 ms