RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 UBAP1LF5GYI3 381 aa8.98□□□□□ -0.97
LINC00254-201ENST00000563416 SASH3O75995 380 aa8.98□□□□□ -0.97
LINC00254-201ENST00000563416 MAP3K6O95382 1288 aa8.98□□□□□ -0.97
LINC00254-201ENST00000563416 ADH7P40394 386 aa8.98□□□□□ -0.97
LINC00254-201ENST00000563416 SERPINB4P48594 390 aa8.98□□□□□ -0.97
LINC00254-201ENST00000563416 TBC1D8BQ0IIM8 1120 aa8.98□□□□□ -0.97
LINC00254-201ENST00000563416 CHSY3Q70JA7 882 aa8.98□□□□□ -0.97
LINC00254-201ENST00000563416 TXNDC2Q86VQ3 553 aa8.98□□□□□ -0.97
LINC00254-201ENST00000563416 GLYCTKQ8IVS8 523 aa8.98□□□□□ -0.97
LINC00254-201ENST00000563416 BTBD6Q96KE9 485 aa8.98□□□□□ -0.97
LINC00254-201ENST00000563416 IGFLR1Q9H665 355 aa8.98□□□□□ -0.97
LINC00254-201ENST00000563416 PIK3R2O00459 728 aa8.97□□□□□ -0.97
LINC00254-201ENST00000563416 ICMTO60725 284 aa8.97□□□□□ -0.97
LINC00254-201ENST00000563416 TARSP26639 723 aaKnown RBP8.97□□□□□ -0.97
LINC00254-201ENST00000563416 KANK3Q6NY19 840 aa8.97□□□□□ -0.97
LINC00254-201ENST00000563416 NLRP13Q86W25 1043 aa8.97□□□□□ -0.97
LINC00254-201ENST00000563416 BEND7Q8N7W2 519 aaPredicted RBP8.97□□□□□ -0.97
LINC00254-201ENST00000563416 TRAIPQ9BWF2 469 aa8.97□□□□□ -0.97
LINC00254-201ENST00000563416 ANO2Q9NQ90 1003 aa8.97□□□□□ -0.97
LINC00254-201ENST00000563416 H3BRB1 525 aa8.96□□□□□ -0.98
LINC00254-201ENST00000563416 MZF1P28698 734 aaPredicted RBP8.96□□□□□ -0.98
LINC00254-201ENST00000563416 DNM1Q05193 864 aaKnown RBP8.96□□□□□ -0.98
LINC00254-201ENST00000563416 DHX32Q7L7V1 743 aaKnown RBP8.96□□□□□ -0.98
LINC00254-201ENST00000563416 ATCAYQ86WG3 371 aa8.96□□□□□ -0.98
LINC00254-201ENST00000563416 EDEM1Q92611 657 aa8.96□□□□□ -0.98
LINC00254-201ENST00000563416 NUDT16Q96DE0 195 aaKnown RBP8.96□□□□□ -0.98
LINC00254-201ENST00000563416 TUT1Q9H6E5 874 aaKnown RBP8.96□□□□□ -0.98
LINC00254-201ENST00000563416 MKL2Q9ULH7 1088 aa8.96□□□□□ -0.98
LINC00254-201ENST00000563416 ABCC9O60706 1549 aa8.95□□□□□ -0.98
LINC00254-201ENST00000563416 PHF20L1A8MW92 1017 aa8.95□□□□□ -0.98
LINC00254-201ENST00000563416 PATL2C9JE40 543 aaKnown RBP8.95□□□□□ -0.98
LINC00254-201ENST00000563416 PSAPP07602 524 aa8.95□□□□□ -0.98
LINC00254-201ENST00000563416 USP5P45974 858 aa8.95□□□□□ -0.98
LINC00254-201ENST00000563416 TRIP4Q15650 581 aaPredicted RBP8.95□□□□□ -0.98
LINC00254-201ENST00000563416 MDFIQ99750 246 aa8.95□□□□□ -0.98
LINC00254-201ENST00000563416 DNAJB12Q9NXW2 375 aaKnown RBP8.95□□□□□ -0.98
LINC00254-201ENST00000563416 ZFATQ9P243 1243 aa8.95□□□□□ -0.98
LINC00254-201ENST00000563416 PDE12Q6L8Q7 609 aaKnown RBP8.94□□□□□ -0.98
LINC00254-201ENST00000563416 GNEQ9Y223 722 aaKnown RBP8.94□□□□□ -0.98
LINC00254-201ENST00000563416 PDGFAP04085 211 aa8.93□□□□□ -0.98
LINC00254-201ENST00000563416 PDIA4P13667 645 aaKnown RBP8.93□□□□□ -0.98
LINC00254-201ENST00000563416 SOX18P35713 384 aa8.93□□□□□ -0.98
LINC00254-201ENST00000563416 PLAURQ03405 335 aa8.93□□□□□ -0.98
LINC00254-201ENST00000563416 KCNA1Q09470 495 aa8.93□□□□□ -0.98
LINC00254-201ENST00000563416 TLR7Q9NYK1 1049 aaKnown RBP8.93□□□□□ -0.98
LINC00254-201ENST00000563416 SLC6A14Q9UN76 642 aa8.93□□□□□ -0.98
LINC00254-201ENST00000563416 DGKGP49619 791 aa8.92□□□□□ -0.98
LINC00254-201ENST00000563416 NRLP54845 237 aa8.92□□□□□ -0.98
LINC00254-201ENST00000563416 GPLD1P80108 840 aa8.92□□□□□ -0.98
LINC00254-201ENST00000563416 EHHADHQ08426 723 aa8.92□□□□□ -0.98
LINC00254-201ENST00000563416 C8orf34Q49A92 452 aa8.92□□□□□ -0.98
LINC00254-201ENST00000563416 TTC39BQ5VTQ0 682 aaPredicted RBP8.92□□□□□ -0.98
LINC00254-201ENST00000563416 ZNF438Q7Z4V0 828 aa8.92□□□□□ -0.98
LINC00254-201ENST00000563416 TRPM4Q8TD43 1214 aa8.92□□□□□ -0.98
LINC00254-201ENST00000563416 POLIQ9UNA4 740 aa8.92□□□□□ -0.98
LINC00254-201ENST00000563416 MMP20O60882 483 aa8.91□□□□□ -0.98
LINC00254-201ENST00000563416 ABI2Q9NYB9 513 aaPredicted RBP8.91□□□□□ -0.98
LINC00254-201ENST00000563416 CNTNAP5Q8WYK1 1306 aa8.9□□□□□ -0.98
LINC00254-201ENST00000563416 M0R082 166 aa8.9□□□□□ -0.98
LINC00254-201ENST00000563416 GNB5O14775 395 aa8.9□□□□□ -0.98
LINC00254-201ENST00000563416 SNRPNP63162 240 aaKnown RBP8.9□□□□□ -0.98
LINC00254-201ENST00000563416 XKR5Q6UX68 686 aa8.9□□□□□ -0.98
LINC00254-201ENST00000563416 FAM35AQ86V20 835 aa8.9□□□□□ -0.98
LINC00254-201ENST00000563416 ZNF417Q8TAU3 575 aa8.9□□□□□ -0.98
LINC00254-201ENST00000563416 ZNF587Q96SQ5 575 aaPredicted RBP8.9□□□□□ -0.98
LINC00254-201ENST00000563416 RBSNQ9H1K0 784 aa8.9□□□□□ -0.98
LINC00254-201ENST00000563416 BRPF3Q9ULD4 1205 aa8.9□□□□□ -0.98
LINC00254-201ENST00000563416 NDUFB5O43674 189 aa8.89□□□□□ -0.99
LINC00254-201ENST00000563416 FZD6O60353 706 aa8.89□□□□□ -0.99
LINC00254-201ENST00000563416 ELP3Q9H9T3 547 aa8.89□□□□□ -0.99
LINC00254-201ENST00000563416 NOP53Q9NZM5 478 aaKnown RBP8.89□□□□□ -0.99
LINC00254-201ENST00000563416 SOWAHDA6NJG2 315 aa8.88□□□□□ -0.99
LINC00254-201ENST00000563416 LILRB5O75023 590 aa8.88□□□□□ -0.99
LINC00254-201ENST00000563416 ALBP02768 609 aa8.88□□□□□ -0.99
LINC00254-201ENST00000563416 HOXD8P13378 290 aaPredicted RBP8.88□□□□□ -0.99
LINC00254-201ENST00000563416 CPB1P15086 417 aa8.88□□□□□ -0.99
LINC00254-201ENST00000563416 HOXB4P17483 251 aaPredicted RBP8.88□□□□□ -0.99
LINC00254-201ENST00000563416 KCNMA1Q12791 1236 aa8.88□□□□□ -0.99
LINC00254-201ENST00000563416 MICALL1Q8N3F8 863 aa8.88□□□□□ -0.99
LINC00254-201ENST00000563416 OR13H1Q8NG92 308 aa8.88□□□□□ -0.99
LINC00254-201ENST00000563416 PRDM6Q9NQX0 595 aa8.88□□□□□ -0.99
LINC00254-201ENST00000563416 FRRS1LQ9P0K9 344 aa8.88□□□□□ -0.99
LINC00254-201ENST00000563416 ZBTB42B2RXF5 422 aa8.87□□□□□ -0.99
LINC00254-201ENST00000563416 RGS9O75916 674 aaPredicted RBP8.87□□□□□ -0.99
LINC00254-201ENST00000563416 GHRHP01286 108 aa8.87□□□□□ -0.99
LINC00254-201ENST00000563416 IRS1P35568 1242 aa8.87□□□□□ -0.99
LINC00254-201ENST00000563416 MLLT1Q03111 559 aaPredicted RBP8.87□□□□□ -0.99
LINC00254-201ENST00000563416 PSAPL1Q6NUJ1 521 aa8.87□□□□□ -0.99
LINC00254-201ENST00000563416 ELMSAN1Q6PJG2 1045 aa8.87□□□□□ -0.99
LINC00254-201ENST00000563416 SPACA7Q96KW9 195 aa8.87□□□□□ -0.99
LINC00254-201ENST00000563416 NSUN5Q96P11 429 aaKnown RBP8.87□□□□□ -0.99
LINC00254-201ENST00000563416 GGNBP2Q9H3C7 697 aa8.87□□□□□ -0.99
LINC00254-201ENST00000563416 JPH1Q9HDC5 661 aaPredicted RBP8.87□□□□□ -0.99
LINC00254-201ENST00000563416 CCDC87Q9NVE4 849 aa8.87□□□□□ -0.99
LINC00254-201ENST00000563416 STARD13Q9Y3M8 1113 aa8.87□□□□□ -0.99
LINC00254-201ENST00000563416 IVNS1ABPQ9Y6Y0 642 aa8.87□□□□□ -0.99
LINC00254-201ENST00000563416 LOC102724428A0A0B4J2F2 783 aa8.86□□□□□ -0.99
LINC00254-201ENST00000563416 SPDYE3A6NKU9 549 aa8.86□□□□□ -0.99
LINC00254-201ENST00000563416 EIF2AK2P19525 551 aaKnown RBP8.86□□□□□ -0.99
LINC00254-201ENST00000563416 SIK1P57059 783 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms