RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 BOLA2Q9H3K6 86 aa15.27■□□□□ 0.04
AC055717.2-201ENST00000561864 CCDC87Q9NVE4 849 aa15.27■□□□□ 0.04
AC055717.2-201ENST00000561864 USP21Q9UK80 565 aa15.27■□□□□ 0.04
AC055717.2-201ENST00000561864 CCDC9Q9Y3X0 531 aaKnown RBP15.27■□□□□ 0.04
AC055717.2-201ENST00000561864 LRP5O75197 1615 aa15.27■□□□□ 0.03
AC055717.2-201ENST00000561864 MYH3P11055 1940 aa15.26■□□□□ 0.03
AC055717.2-201ENST00000561864 NUCB2P80303 420 aa15.26■□□□□ 0.03
AC055717.2-201ENST00000561864 NMIQ13287 307 aaPredicted RBP15.26■□□□□ 0.03
AC055717.2-201ENST00000561864 DBNDD2Q9BQY9 259 aa15.26■□□□□ 0.03
AC055717.2-201ENST00000561864 SNX14Q9Y5W7 946 aa15.26■□□□□ 0.03
AC055717.2-201ENST00000561864 LAMB2P55268 1798 aa15.26■□□□□ 0.03
AC055717.2-201ENST00000561864 BCL9LQ86UU0 1499 aa15.26■□□□□ 0.03
AC055717.2-201ENST00000561864 THSD7AQ9UPZ6 1657 aa15.25■□□□□ 0.03
AC055717.2-201ENST00000561864 PALLDQ8WX93 1383 aa15.25■□□□□ 0.03
AC055717.2-201ENST00000561864 CUL4AQ13619 759 aa15.25■□□□□ 0.03
AC055717.2-201ENST00000561864 GSE1Q14687 1217 aa15.25■□□□□ 0.03
AC055717.2-201ENST00000561864 HLFQ16534 295 aa15.25■□□□□ 0.03
AC055717.2-201ENST00000561864 ZNF772Q68DY9 489 aaPredicted RBP15.25■□□□□ 0.03
AC055717.2-201ENST00000561864 DZIP3Q86Y13 1208 aaKnown RBP15.25■□□□□ 0.03
AC055717.2-201ENST00000561864 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.25■□□□□ 0.03
AC055717.2-201ENST00000561864 TNPO1Q92973 898 aaKnown RBP15.25■□□□□ 0.03
AC055717.2-201ENST00000561864 AK7Q96M32 723 aa15.25■□□□□ 0.03
AC055717.2-201ENST00000561864 BCORQ6W2J9 1755 aa15.25■□□□□ 0.03
AC055717.2-201ENST00000561864 LOC102724428A0A0B4J2F2 783 aa15.24■□□□□ 0.03
AC055717.2-201ENST00000561864 EIF5P55010 431 aaKnown RBP15.24■□□□□ 0.03
AC055717.2-201ENST00000561864 SIK1P57059 783 aa15.24■□□□□ 0.03
AC055717.2-201ENST00000561864 INTS5Q6P9B9 1019 aaKnown RBP15.24■□□□□ 0.03
AC055717.2-201ENST00000561864 CLEC17AQ6ZS10 378 aa15.24■□□□□ 0.03
AC055717.2-201ENST00000561864 INTS4Q96HW7 963 aaKnown RBP15.24■□□□□ 0.03
AC055717.2-201ENST00000561864 TMX3Q96JJ7 454 aa15.24■□□□□ 0.03
AC055717.2-201ENST00000561864 TM6SF1Q9BZW5 370 aa15.24■□□□□ 0.03
AC055717.2-201ENST00000561864 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
AC055717.2-201ENST00000561864 AKAP2Q9Y2D5 859 aa15.24■□□□□ 0.03
AC055717.2-201ENST00000561864 ABCC12Q96J65 1359 aa15.24■□□□□ 0.03
AC055717.2-201ENST00000561864 CTSWP56202 376 aa15.23■□□□□ 0.03
AC055717.2-201ENST00000561864 IFIT5Q13325 482 aaKnown RBP15.23■□□□□ 0.03
AC055717.2-201ENST00000561864 TAF7LQ5H9L4 462 aa15.23■□□□□ 0.03
AC055717.2-201ENST00000561864 ZNF34Q8IZ26 560 aa15.23■□□□□ 0.03
AC055717.2-201ENST00000561864 FAM89AQ96GI7 184 aa15.23■□□□□ 0.03
AC055717.2-201ENST00000561864 ACSBG1Q96GR2 724 aa15.23■□□□□ 0.03
AC055717.2-201ENST00000561864 ARXQ96QS3 562 aa15.23■□□□□ 0.03
AC055717.2-201ENST00000561864 CEP126Q9P2H0 1117 aa15.23■□□□□ 0.03
AC055717.2-201ENST00000561864 RIC1Q4ADV7 1423 aa15.23■□□□□ 0.03
AC055717.2-201ENST00000561864 NHSQ6T4R5 1651 aa15.22■□□□□ 0.03
AC055717.2-201ENST00000561864 A0A0D9SFI3 127 aa15.22■□□□□ 0.03
AC055717.2-201ENST00000561864 CYP2E1P05181 493 aaPredicted RBP15.22■□□□□ 0.03
AC055717.2-201ENST00000561864 GPTP24298 496 aa15.22■□□□□ 0.03
AC055717.2-201ENST00000561864 ATP6V1AP38606 617 aa15.22■□□□□ 0.03
AC055717.2-201ENST00000561864 PTH1RQ03431 593 aa15.22■□□□□ 0.03
AC055717.2-201ENST00000561864 LRRC24Q50LG9 513 aa15.22■□□□□ 0.03
AC055717.2-201ENST00000561864 POTEAQ6S8J7 498 aa15.22■□□□□ 0.03
AC055717.2-201ENST00000561864 MAP4K1Q92918 833 aa15.22■□□□□ 0.03
AC055717.2-201ENST00000561864 ZNF594Q96JF6 807 aaPredicted RBP15.22■□□□□ 0.03
AC055717.2-201ENST00000561864 FAM227BQ96M60 508 aa15.22■□□□□ 0.03
AC055717.2-201ENST00000561864 QTRT2Q9H974 415 aaKnown RBP15.22■□□□□ 0.03
AC055717.2-201ENST00000561864 SH3TC1Q8TE82 1336 aa15.21■□□□□ 0.03
AC055717.2-201ENST00000561864 A0A1B0GUL7 405 aa15.21■□□□□ 0.03
AC055717.2-201ENST00000561864 PDE8AO60658 829 aa15.21■□□□□ 0.03
AC055717.2-201ENST00000561864 ZKSCAN1P17029 563 aaPredicted RBP15.21■□□□□ 0.03
AC055717.2-201ENST00000561864 CRKLP46109 303 aaKnown RBP15.21■□□□□ 0.03
AC055717.2-201ENST00000561864 NECTIN1Q15223 517 aa15.21■□□□□ 0.03
AC055717.2-201ENST00000561864 RNF20Q5VTR2 975 aa15.21■□□□□ 0.03
AC055717.2-201ENST00000561864 KBTBD3Q8NAB2 608 aa15.21■□□□□ 0.03
AC055717.2-201ENST00000561864 TTC14Q96N46 770 aa15.21■□□□□ 0.03
AC055717.2-201ENST00000561864 UPF3BQ9BZI7 483 aaKnown RBP15.21■□□□□ 0.03
AC055717.2-201ENST00000561864 TRMT112Q9UI30 125 aaKnown RBP15.21■□□□□ 0.03
AC055717.2-201ENST00000561864 RBM8AQ9Y5S9 174 aaKnown RBP15.21■□□□□ 0.03
AC055717.2-201ENST00000561864 ARAP2Q8WZ64 1704 aa15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 ANKRD18BA2A2Z9 1011 aa15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 IRS4O14654 1257 aaPredicted RBP15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 RGL2O15211 777 aa15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 HSP90B1P14625 803 aaKnown RBP15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 SSFA2P28290 1259 aa15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 KCNJ4P48050 445 aa15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 ITPK1Q13572 414 aa15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 PARP10Q53GL7 1025 aa15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 RASEFQ8IZ41 740 aa15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 TTLL11Q8NHH1 800 aa15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 NEUROD6Q96NK8 337 aa15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 DNAJC2Q99543 621 aaKnown RBP15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 PUS3Q9BZE2 481 aaKnown RBP15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 HMG20BQ9P0W2 317 aa15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 TRPC5Q9UL62 973 aaPredicted RBP15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 RPAP1Q9BWH6 1393 aaPredicted RBP15.2■□□□□ 0.02
AC055717.2-201ENST00000561864 UBN2Q6ZU65 1347 aa15.19■□□□□ 0.02
AC055717.2-201ENST00000561864 SCN7AQ01118 1682 aa15.19■□□□□ 0.02
AC055717.2-201ENST00000561864 A0A0G2JS52 829 aa15.19■□□□□ 0.02
AC055717.2-201ENST00000561864 GOLGA6L22H0YM25 854 aa15.19■□□□□ 0.02
AC055717.2-201ENST00000561864 FAM98CQ17RN3 349 aaKnown RBP15.19■□□□□ 0.02
AC055717.2-201ENST00000561864 VPS53Q5VIR6 699 aa15.19■□□□□ 0.02
AC055717.2-201ENST00000561864 CREB3L3Q68CJ9 461 aa15.19■□□□□ 0.02
AC055717.2-201ENST00000561864 PRPF40BQ6NWY9 871 aaKnown RBP15.19■□□□□ 0.02
AC055717.2-201ENST00000561864 ZSWIM6Q9HCJ5 1215 aa15.19■□□□□ 0.02
AC055717.2-201ENST00000561864 PAG1Q9NWQ8 432 aa15.19■□□□□ 0.02
AC055717.2-201ENST00000561864 TBC1D2BQ9UPU7 963 aa15.19■□□□□ 0.02
AC055717.2-201ENST00000561864 DDX60Q8IY21 1712 aaKnown RBP15.18■□□□□ 0.02
AC055717.2-201ENST00000561864 CAMTA2O94983 1202 aa15.18■□□□□ 0.02
AC055717.2-201ENST00000561864 ITGA6P23229 1130 aa15.18■□□□□ 0.02
AC055717.2-201ENST00000561864 PSMA5P28066 241 aa15.18■□□□□ 0.02
AC055717.2-201ENST00000561864 TIMM10P62072 90 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms