RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	MYH3	P11055	1940 aa		32.64	■■■□□ 2.82
TCF12-222	ENST00000561152	RASSF7	Q02833	373 aa		32.64	■■■□□ 2.82
TCF12-222	ENST00000561152	TAOK3	Q9H2K8	898 aa		32.64	■■■□□ 2.82
TCF12-222	ENST00000561152	LTBP3	Q9NS15	1303 aa		32.64	■■■□□ 2.82
TCF12-222	ENST00000561152	NFKBIE	O00221	500 aa		32.63	■■■□□ 2.81
TCF12-222	ENST00000561152	TMC4	Q7Z404	712 aa		32.63	■■■□□ 2.81
TCF12-222	ENST00000561152	NOB1	Q9ULX3	412 aa	Known RBP	32.63	■■■□□ 2.81
TCF12-222	ENST00000561152	LMNB1	P20700	586 aa		32.62	■■■□□ 2.81
TCF12-222	ENST00000561152	C9orf131	Q5VYM1	1079 aa		32.62	■■■□□ 2.81
TCF12-222	ENST00000561152	API5	Q9BZZ5	524 aa	Known RBP	32.62	■■■□□ 2.81
TCF12-222	ENST00000561152	CTSW	P56202	376 aa		32.61	■■■□□ 2.81
TCF12-222	ENST00000561152	C9orf78	Q9NZ63	289 aa	Predicted RBP	32.61	■■■□□ 2.81
TCF12-222	ENST00000561152	RNF181	Q9P0P0	153 aa		32.61	■■■□□ 2.81
TCF12-222	ENST00000561152	GRM8	O00222	908 aa		32.6	■■■□□ 2.81
TCF12-222	ENST00000561152	ARHGAP45	Q92619	1136 aa		32.6	■■■□□ 2.81
TCF12-222	ENST00000561152	PLA2G12B	Q9BX93	195 aa		32.6	■■■□□ 2.81
TCF12-222	ENST00000561152	ATP6V0A2	Q9Y487	856 aa		32.6	■■■□□ 2.81
TCF12-222	ENST00000561152	IPO8	O15397	1037 aa	Known RBP	32.59	■■■□□ 2.81
TCF12-222	ENST00000561152	CASP7	P55210	303 aa		32.59	■■■□□ 2.81
TCF12-222	ENST00000561152	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.58	■■■□□ 2.81
TCF12-222	ENST00000561152	TAF1	P21675	1872 aa		32.57	■■■□□ 2.8
TCF12-222	ENST00000561152	CCDC88A	Q3V6T2	1871 aa		32.57	■■■□□ 2.8
TCF12-222	ENST00000561152	OLFM4	Q6UX06	510 aa		32.57	■■■□□ 2.8
TCF12-222	ENST00000561152	SP8	Q8IXZ3	490 aa		32.57	■■■□□ 2.8
TCF12-222	ENST00000561152	TTLL11	Q8NHH1	800 aa		32.56	■■■□□ 2.8
TCF12-222	ENST00000561152	CCT4	P50991	539 aa	Known RBP	32.55	■■■□□ 2.8
TCF12-222	ENST00000561152	CELF1	Q92879	486 aa	Known RBP	32.55	■■■□□ 2.8
TCF12-222	ENST00000561152	PSMD1	Q99460	953 aa		32.55	■■■□□ 2.8
TCF12-222	ENST00000561152	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.54	■■■□□ 2.8
TCF12-222	ENST00000561152	RPS8	P62241	208 aa	Known RBP	32.54	■■■□□ 2.8
TCF12-222	ENST00000561152	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.54	■■■□□ 2.8
TCF12-222	ENST00000561152	CDC5L	Q99459	802 aa	Known RBP	32.54	■■■□□ 2.8
TCF12-222	ENST00000561152	RTL9	Q8NET4	1388 aa		32.54	■■■□□ 2.8
TCF12-222	ENST00000561152	SNED1	Q8TER0	1413 aa		32.53	■■■□□ 2.8
TCF12-222	ENST00000561152	BCAR3	O75815	825 aa		32.53	■■■□□ 2.8
TCF12-222	ENST00000561152	SEC31B	Q9NQW1	1179 aa		32.53	■■■□□ 2.8
TCF12-222	ENST00000561152	DICER1	Q9UPY3	1922 aa	Known RBP	32.52	■■■□□ 2.8
TCF12-222	ENST00000561152	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.52	■■■□□ 2.8
TCF12-222	ENST00000561152	ANKRD18A	Q8IVF6	992 aa		32.51	■■■□□ 2.79
TCF12-222	ENST00000561152	FRAT1	Q92837	279 aa	Predicted RBP	32.51	■■■□□ 2.79
TCF12-222	ENST00000561152	LRRC37A	A6NMS7	1700 aa		32.51	■■■□□ 2.79
TCF12-222	ENST00000561152	UTY	O14607	1347 aa		32.51	■■■□□ 2.79
TCF12-222	ENST00000561152	CSF1R	P07333	972 aa		32.5	■■■□□ 2.79
TCF12-222	ENST00000561152	PRELP	P51888	382 aa		32.5	■■■□□ 2.79
TCF12-222	ENST00000561152	GREM2	Q9H772	168 aa		32.5	■■■□□ 2.79
TCF12-222	ENST00000561152	TIAM2	Q8IVF5	1701 aa		32.49	■■■□□ 2.79
TCF12-222	ENST00000561152	SUPT20H	Q8NEM7	779 aa		32.49	■■■□□ 2.79
TCF12-222	ENST00000561152	DPP8	Q6V1X1	898 aa	Predicted RBP	32.48	■■■□□ 2.79
TCF12-222	ENST00000561152	ATF7IP	Q6VMQ6	1270 aa		32.48	■■■□□ 2.79
TCF12-222	ENST00000561152	MPND	Q8N594	471 aa		32.48	■■■□□ 2.79
TCF12-222	ENST00000561152	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.48	■■■□□ 2.79
TCF12-222	ENST00000561152	FOXO4	P98177	505 aa		32.47	■■■□□ 2.79
TCF12-222	ENST00000561152	ZKSCAN2	Q63HK3	967 aa		32.47	■■■□□ 2.79
TCF12-222	ENST00000561152	NBPF7	P0C2Y1	421 aa	Predicted RBP	32.46	■■■□□ 2.79
TCF12-222	ENST00000561152	IARS	P41252	1262 aa	Known RBP	32.46	■■■□□ 2.79
TCF12-222	ENST00000561152	ITGA6	P23229	1130 aa		32.45	■■■□□ 2.79
TCF12-222	ENST00000561152	FAM161A	Q3B820	660 aa		32.45	■■■□□ 2.79
TCF12-222	ENST00000561152	VPS33B	Q9H267	617 aa		32.45	■■■□□ 2.79
TCF12-222	ENST00000561152	COL4A1	P02462	1669 aa		32.45	■■■□□ 2.79
TCF12-222	ENST00000561152	TRIM27	P14373	513 aa		32.44	■■■□□ 2.78
TCF12-222	ENST00000561152	IGHMBP2	P38935	993 aa	Known RBP	32.44	■■■□□ 2.78
TCF12-222	ENST00000561152	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.44	■■■□□ 2.78
TCF12-222	ENST00000561152	USP44	Q9H0E7	712 aa		32.44	■■■□□ 2.78
TCF12-222	ENST00000561152	CHMP3	Q9Y3E7	222 aa		32.44	■■■□□ 2.78
TCF12-222	ENST00000561152	ANKRD18B	A2A2Z9	1011 aa		32.43	■■■□□ 2.78
TCF12-222	ENST00000561152	IFIT5	Q13325	482 aa	Known RBP	32.43	■■■□□ 2.78
TCF12-222	ENST00000561152	LMBR1L	Q6UX01	489 aa		32.43	■■■□□ 2.78
TCF12-222	ENST00000561152	SLC51A	Q86UW1	340 aa		32.43	■■■□□ 2.78
TCF12-222	ENST00000561152	SUCLG2	Q96I99	432 aa		32.43	■■■□□ 2.78
TCF12-222	ENST00000561152	INTS3	Q68E01	1043 aa	Known RBP	32.42	■■■□□ 2.78
TCF12-222	ENST00000561152	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.42	■■■□□ 2.78
TCF12-222	ENST00000561152	BSDC1	Q9NW68	430 aa	Predicted RBP	32.42	■■■□□ 2.78
TCF12-222	ENST00000561152	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.42	■■■□□ 2.78
TCF12-222	ENST00000561152	HDAC5	Q9UQL6	1122 aa		32.42	■■■□□ 2.78
TCF12-222	ENST00000561152	JDP2	Q8WYK2	163 aa		32.41	■■■□□ 2.78
TCF12-222	ENST00000561152	KDM2B	Q8NHM5	1336 aa		32.41	■■■□□ 2.78
TCF12-222	ENST00000561152	CCDC57	Q2TAC2	916 aa		32.4	■■■□□ 2.78
TCF12-222	ENST00000561152	EPHA10	Q5JZY3	1008 aa		32.4	■■■□□ 2.78
TCF12-222	ENST00000561152	ZNF526	Q8TF50	670 aa	Predicted RBP	32.4	■■■□□ 2.78
TCF12-222	ENST00000561152	YTHDC1	Q96MU7	727 aa	Known RBP	32.4	■■■□□ 2.78
TCF12-222	ENST00000561152	MPHOSPH8	Q99549	860 aa		32.4	■■■□□ 2.78
TCF12-222	ENST00000561152	SPEF2	Q9C093	1822 aa		32.4	■■■□□ 2.78
TCF12-222	ENST00000561152	DPY19L2	Q6NUT2	758 aa		32.39	■■■□□ 2.78
TCF12-222	ENST00000561152	LARGE2	Q8N3Y3	721 aa		32.39	■■■□□ 2.78
TCF12-222	ENST00000561152	PPIP5K2	O43314	1243 aa		32.38	■■■□□ 2.77
TCF12-222	ENST00000561152	UBTFL1	P0CB47	393 aa	Predicted RBP	32.38	■■■□□ 2.77
TCF12-222	ENST00000561152	GPSM2	P81274	684 aa		32.38	■■■□□ 2.77
TCF12-222	ENST00000561152	KAZALD1	Q96I82	304 aa		32.38	■■■□□ 2.77
TCF12-222	ENST00000561152	PODXL2	Q9NZ53	605 aa		32.38	■■■□□ 2.77
TCF12-222	ENST00000561152	ANKIB1	Q9P2G1	1089 aa		32.38	■■■□□ 2.77
TCF12-222	ENST00000561152	CLUAP1	Q96AJ1	413 aa		32.37	■■■□□ 2.77
TCF12-222	ENST00000561152	BICC1	Q9H694	974 aa	Known RBP	32.37	■■■□□ 2.77
TCF12-222	ENST00000561152	GLTPD2	A6NH11	291 aa		32.36	■■■□□ 2.77
TCF12-222	ENST00000561152	RABL6	Q3YEC7	729 aa	Predicted RBP	32.36	■■■□□ 2.77
TCF12-222	ENST00000561152	TAF7L	Q5H9L4	462 aa		32.36	■■■□□ 2.77
TCF12-222	ENST00000561152	FTSJ3	Q8IY81	847 aa	Known RBP	32.36	■■■□□ 2.77
TCF12-222	ENST00000561152	EYA3	Q99504	573 aa		32.36	■■■□□ 2.77
TCF12-222	ENST00000561152	RCAN3	Q9UKA8	241 aa		32.36	■■■□□ 2.77
TCF12-222	ENST00000561152	DUOX1	Q9NRD9	1551 aa		32.36	■■■□□ 2.77
TCF12-222	ENST00000561152	LTBP1	Q14766	1721 aa		32.35	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms