RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	UST	Q9Y2C2	406 aa		10.7	□□□□□ -0.7
MARK3-223	ENST00000561071	PRMT3	O60678	531 aa		10.69	□□□□□ -0.7
MARK3-223	ENST00000561071	FOXK2	Q01167	660 aa		10.69	□□□□□ -0.7
MARK3-223	ENST00000561071	PRICKLE2	Q7Z3G6	844 aa		10.69	□□□□□ -0.7
MARK3-223	ENST00000561071	SLC9A9	Q8IVB4	645 aa		10.69	□□□□□ -0.7
MARK3-223	ENST00000561071	PRIMPOL	Q96LW4	560 aa		10.69	□□□□□ -0.7
MARK3-223	ENST00000561071	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.69	□□□□□ -0.7
MARK3-223	ENST00000561071	TMEM214	Q6NUQ4	689 aa	Known RBP	10.68	□□□□□ -0.7
MARK3-223	ENST00000561071	HOMEZ	Q8IX15	550 aa		10.68	□□□□□ -0.7
MARK3-223	ENST00000561071	CLP1	Q92989	425 aa	Known RBP	10.68	□□□□□ -0.7
MARK3-223	ENST00000561071	ROCK1	Q13464	1354 aa		10.67	□□□□□ -0.7
MARK3-223	ENST00000561071	CDK2AP1	O14519	115 aa		10.67	□□□□□ -0.7
MARK3-223	ENST00000561071	C21orf2	O43822	256 aa		10.67	□□□□□ -0.7
MARK3-223	ENST00000561071	KCNA6	P17658	529 aa		10.67	□□□□□ -0.7
MARK3-223	ENST00000561071	SCG3	Q8WXD2	468 aa	Known RBP	10.67	□□□□□ -0.7
MARK3-223	ENST00000561071	ADGRB3	O60242	1522 aa		10.67	□□□□□ -0.7
MARK3-223	ENST00000561071	NUP155	O75694	1391 aa		10.66	□□□□□ -0.7
MARK3-223	ENST00000561071	TMEM94	Q12767	1356 aa		10.66	□□□□□ -0.7
MARK3-223	ENST00000561071	POTEC	B2RU33	542 aa		10.66	□□□□□ -0.7
MARK3-223	ENST00000561071	RHOQ	P17081	205 aa		10.66	□□□□□ -0.7
MARK3-223	ENST00000561071	POU4F2	Q12837	409 aa		10.66	□□□□□ -0.7
MARK3-223	ENST00000561071	LYSMD3	Q7Z3D4	306 aa		10.66	□□□□□ -0.7
MARK3-223	ENST00000561071	TET3	O43151	1660 aa		10.66	□□□□□ -0.7
MARK3-223	ENST00000561071	ATAD2	Q6PL18	1390 aa		10.65	□□□□□ -0.7
MARK3-223	ENST00000561071	MAN1A2	O60476	641 aa		10.65	□□□□□ -0.7
MARK3-223	ENST00000561071	WEE1	P30291	646 aa		10.65	□□□□□ -0.7
MARK3-223	ENST00000561071	OCLN	Q16625	522 aa		10.65	□□□□□ -0.7
MARK3-223	ENST00000561071	ZNF295-AS1	Q8N0V1	137 aa		10.65	□□□□□ -0.7
MARK3-223	ENST00000561071	RHBDD1	Q8TEB9	315 aa		10.65	□□□□□ -0.7
MARK3-223	ENST00000561071	TRIM47	Q96LD4	638 aa		10.65	□□□□□ -0.7
MARK3-223	ENST00000561071	SENP2	Q9HC62	589 aa		10.65	□□□□□ -0.7
MARK3-223	ENST00000561071	RPRD2	Q5VT52	1461 aa	Known RBP	10.65	□□□□□ -0.7
MARK3-223	ENST00000561071	RIMS2	Q9UQ26	1411 aa		10.65	□□□□□ -0.7
MARK3-223	ENST00000561071	UNC13B	O14795	1591 aa		10.65	□□□□□ -0.71
MARK3-223	ENST00000561071	KDM5A	P29375	1690 aa	Known RBP	10.64	□□□□□ -0.71
MARK3-223	ENST00000561071	XIRP1	Q702N8	1843 aa	Known RBP	10.64	□□□□□ -0.71
MARK3-223	ENST00000561071	MYO5B	Q9ULV0	1848 aa		10.64	□□□□□ -0.71
MARK3-223	ENST00000561071	SNRPB	P14678	240 aa	Known RBP	10.64	□□□□□ -0.71
MARK3-223	ENST00000561071	GTF2E1	P29083	439 aa	Predicted RBP	10.64	□□□□□ -0.71
MARK3-223	ENST00000561071	PHKA2	P46019	1235 aa		10.64	□□□□□ -0.71
MARK3-223	ENST00000561071	C4orf17	Q53FE4	359 aa		10.64	□□□□□ -0.71
MARK3-223	ENST00000561071	CABP1	Q9NZU7	370 aa		10.64	□□□□□ -0.71
MARK3-223	ENST00000561071	PARP3	Q9Y6F1	533 aa		10.64	□□□□□ -0.71
MARK3-223	ENST00000561071	ZFYVE9	O95405	1425 aa		10.64	□□□□□ -0.71
MARK3-223	ENST00000561071		E9PCH4	1651 aa		10.63	□□□□□ -0.71
MARK3-223	ENST00000561071	SPATA31C2	B4DYI2	1134 aa		10.63	□□□□□ -0.71
MARK3-223	ENST00000561071	PPP1R12B	O60237	982 aa	Predicted RBP	10.63	□□□□□ -0.71
MARK3-223	ENST00000561071	ATP2B4	P23634	1241 aa		10.63	□□□□□ -0.71
MARK3-223	ENST00000561071	GNAS	Q5JWF2	1037 aa		10.63	□□□□□ -0.71
MARK3-223	ENST00000561071	SH3PXD2A	Q5TCZ1	1133 aa		10.63	□□□□□ -0.71
MARK3-223	ENST00000561071	ZDHHC1	Q8WTX9	485 aa		10.63	□□□□□ -0.71
MARK3-223	ENST00000561071	KIFC2	Q96AC6	838 aa		10.63	□□□□□ -0.71
MARK3-223	ENST00000561071	TMEM131L	A2VDJ0	1609 aa		10.62	□□□□□ -0.71
MARK3-223	ENST00000561071	MED1	Q15648	1581 aa	Predicted RBP	10.62	□□□□□ -0.71
MARK3-223	ENST00000561071	IGFBP4	P22692	258 aa		10.62	□□□□□ -0.71
MARK3-223	ENST00000561071	NBPF10	Q6P3W6	841 aa	Known RBP	10.62	□□□□□ -0.71
MARK3-223	ENST00000561071	TAS1R3	Q7RTX0	852 aa		10.62	□□□□□ -0.71
MARK3-223	ENST00000561071	NBPF15	Q8N660	670 aa		10.62	□□□□□ -0.71
MARK3-223	ENST00000561071	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.62	□□□□□ -0.71
MARK3-223	ENST00000561071	GCC2	Q8IWJ2	1684 aa		10.62	□□□□□ -0.71
MARK3-223	ENST00000561071	C11orf95	C9JLR9	678 aa	Predicted RBP	10.61	□□□□□ -0.71
MARK3-223	ENST00000561071	SCNN1A	P37088	669 aa		10.61	□□□□□ -0.71
MARK3-223	ENST00000561071	PLA2G4A	P47712	749 aa		10.61	□□□□□ -0.71
MARK3-223	ENST00000561071	PSMA6	P60900	246 aa	Known RBP	10.61	□□□□□ -0.71
MARK3-223	ENST00000561071	FKBP5	Q13451	457 aa	Predicted RBP	10.61	□□□□□ -0.71
MARK3-223	ENST00000561071	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.61	□□□□□ -0.71	2e-6	■■□□□ 11.5
MARK3-223	ENST00000561071	PHLDB3	Q6NSJ2	640 aa		10.61	□□□□□ -0.71
MARK3-223	ENST00000561071	NIFK	Q9BYG3	293 aa	Known RBP	10.61	□□□□□ -0.71
MARK3-223	ENST00000561071	IQGAP3	Q86VI3	1631 aa		10.61	□□□□□ -0.71
MARK3-223	ENST00000561071	PLEKHG1	Q9ULL1	1385 aa		10.61	□□□□□ -0.71
MARK3-223	ENST00000561071	PDIA4	P13667	645 aa	Known RBP	10.6	□□□□□ -0.71
MARK3-223	ENST00000561071	SSFA2	P28290	1259 aa		10.6	□□□□□ -0.71
MARK3-223	ENST00000561071	NOS2	P35228	1153 aa		10.6	□□□□□ -0.71
MARK3-223	ENST00000561071	PDE4C	Q08493	712 aa		10.6	□□□□□ -0.71
MARK3-223	ENST00000561071	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.6	□□□□□ -0.71
MARK3-223	ENST00000561071	TRAIP	Q9BWF2	469 aa		10.6	□□□□□ -0.71
MARK3-223	ENST00000561071	TBX22	Q9Y458	520 aa		10.6	□□□□□ -0.71
MARK3-223	ENST00000561071	TEAD4	Q15561	434 aa		10.59	□□□□□ -0.71
MARK3-223	ENST00000561071	L3MBTL2	Q969R5	705 aa		10.59	□□□□□ -0.71
MARK3-223	ENST00000561071	MKNK1	Q9BUB5	465 aa		10.59	□□□□□ -0.71
MARK3-223	ENST00000561071	ZNF232	Q9UNY5	417 aa		10.59	□□□□□ -0.71
MARK3-223	ENST00000561071	SERTM1	A2A2V5	107 aa		10.58	□□□□□ -0.72
MARK3-223	ENST00000561071	EML1	O00423	815 aa		10.58	□□□□□ -0.72
MARK3-223	ENST00000561071	CAPN12	Q6ZSI9	719 aa		10.58	□□□□□ -0.72
MARK3-223	ENST00000561071	C2orf49	Q9BVC5	232 aa	Predicted RBP	10.58	□□□□□ -0.72
MARK3-223	ENST00000561071	FAM135B	Q49AJ0	1406 aa		10.58	□□□□□ -0.72
MARK3-223	ENST00000561071	ADAMTS13	Q76LX8	1427 aa		10.58	□□□□□ -0.72
MARK3-223	ENST00000561071	RRBP1	Q9P2E9	1410 aa	Known RBP	10.58	□□□□□ -0.72
MARK3-223	ENST00000561071	SENP3-EIF4A1	A0A087X0R7	540 aa		10.57	□□□□□ -0.72
MARK3-223	ENST00000561071	FOXO3	O43524	673 aa		10.57	□□□□□ -0.72
MARK3-223	ENST00000561071	ZNF326	Q5BKZ1	582 aa	Known RBP	10.57	□□□□□ -0.72
MARK3-223	ENST00000561071	AIDA	Q96BJ3	306 aa		10.57	□□□□□ -0.72
MARK3-223	ENST00000561071	TIMMDC1	Q9NPL8	285 aa		10.57	□□□□□ -0.72
MARK3-223	ENST00000561071	NAIP	Q13075	1403 aa		10.57	□□□□□ -0.72
MARK3-223	ENST00000561071	NWD1	Q149M9	1564 aa		10.56	□□□□□ -0.72
MARK3-223	ENST00000561071	NKTR	P30414	1462 aa	Known RBP	10.56	□□□□□ -0.72
MARK3-223	ENST00000561071	MSH6	P52701	1360 aa		10.56	□□□□□ -0.72
MARK3-223	ENST00000561071	TXLNA	P40222	546 aa		10.56	□□□□□ -0.72
MARK3-223	ENST00000561071	PTS	Q03393	145 aa		10.56	□□□□□ -0.72
MARK3-223	ENST00000561071	AMOTL2	Q9Y2J4	779 aa		10.56	□□□□□ -0.72

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