RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 NLRP10Q86W26 655 aa13.97□□□□□ -0.17
TPM1-227ENST00000560970 RTFDC1Q9BY42 306 aaPredicted RBP13.97□□□□□ -0.17
TPM1-227ENST00000560970 WBP1LQ9NX94 342 aa13.97□□□□□ -0.17
TPM1-227ENST00000560970 GPRC5DQ9NZD1 345 aa13.97□□□□□ -0.17
TPM1-227ENST00000560970 SH3TC1Q8TE82 1336 aa13.96□□□□□ -0.17
TPM1-227ENST00000560970 DPP8Q6V1X1 898 aaPredicted RBP13.96□□□□□ -0.17
TPM1-227ENST00000560970 XAGE3Q8WTP9 111 aa13.96□□□□□ -0.17
TPM1-227ENST00000560970 ADARB2Q9NS39 739 aaKnown RBP13.96□□□□□ -0.17
TPM1-227ENST00000560970 AKAP11Q9UKA4 1901 aa13.96□□□□□ -0.18
TPM1-227ENST00000560970 MAP2K1Q02750 393 aaPredicted RBP13.95□□□□□ -0.18
TPM1-227ENST00000560970 GRAPQ13588 217 aa13.95□□□□□ -0.18
TPM1-227ENST00000560970 COPS6Q7L5N1 327 aa13.95□□□□□ -0.18
TPM1-227ENST00000560970 GRAPLQ8TC17 118 aaPredicted RBP13.95□□□□□ -0.18
TPM1-227ENST00000560970 NECTIN2Q92692 538 aa13.95□□□□□ -0.18
TPM1-227ENST00000560970 ZNRF3Q9ULT6 936 aa13.95□□□□□ -0.18
TPM1-227ENST00000560970 A0A1B0GUL6 1792 aa13.95□□□□□ -0.18
TPM1-227ENST00000560970 HOXB7P09629 217 aa13.94□□□□□ -0.18
TPM1-227ENST00000560970 HSPA8P11142 646 aaKnown RBP13.94□□□□□ -0.18
TPM1-227ENST00000560970 HCLS1P14317 486 aaPredicted RBP13.94□□□□□ -0.18
TPM1-227ENST00000560970 ECE1P42892 770 aa13.94□□□□□ -0.18
TPM1-227ENST00000560970 LBX1P52954 281 aa13.94□□□□□ -0.18
TPM1-227ENST00000560970 KIAA2012Q0VF49 1180 aa13.94□□□□□ -0.18
TPM1-227ENST00000560970 AIMP1Q12904 312 aaKnown RBP13.94□□□□□ -0.18
TPM1-227ENST00000560970 PAXIP1Q6ZW49 1069 aaPredicted RBP13.94□□□□□ -0.18
TPM1-227ENST00000560970 DDX46Q7L014 1031 aaKnown RBP13.94□□□□□ -0.18
TPM1-227ENST00000560970 TMC4Q7Z404 712 aa13.94□□□□□ -0.18
TPM1-227ENST00000560970 CAPNS2Q96L46 248 aa13.94□□□□□ -0.18
TPM1-227ENST00000560970 CHPF2Q9P2E5 772 aa13.94□□□□□ -0.18
TPM1-227ENST00000560970 TRMT112Q9UI30 125 aaKnown RBP13.94□□□□□ -0.18
TPM1-227ENST00000560970 TRAF5O00463 557 aa13.93□□□□□ -0.18
TPM1-227ENST00000560970 BBOX1O75936 387 aa13.93□□□□□ -0.18
TPM1-227ENST00000560970 GMPSP49915 693 aaPredicted RBP13.93□□□□□ -0.18
TPM1-227ENST00000560970 CXCL9Q07325 125 aa13.93□□□□□ -0.18
TPM1-227ENST00000560970 TCIRG1Q13488 830 aa13.93□□□□□ -0.18
TPM1-227ENST00000560970 KRT24Q2M2I5 525 aa13.93□□□□□ -0.18
TPM1-227ENST00000560970 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
TPM1-227ENST00000560970 SP8Q8IXZ3 490 aa13.93□□□□□ -0.18
TPM1-227ENST00000560970 MPNDQ8N594 471 aa13.93□□□□□ -0.18
TPM1-227ENST00000560970 TLL2Q9Y6L7 1015 aa13.93□□□□□ -0.18
TPM1-227ENST00000560970 CHL1O00533 1208 aa13.92□□□□□ -0.18
TPM1-227ENST00000560970 FMR1Q06787 632 aaKnown RBP eCLIP13.92□□□□□ -0.18
TPM1-227ENST00000560970 CIAPIN1Q6FI81 312 aa13.92□□□□□ -0.18
TPM1-227ENST00000560970 FAM9BQ8IZU0 186 aa13.92□□□□□ -0.18
TPM1-227ENST00000560970 CACNA1FO60840 1977 aa13.92□□□□□ -0.18
TPM1-227ENST00000560970 CASP8AP2Q9UKL3 1982 aa13.92□□□□□ -0.18
TPM1-227ENST00000560970 CYP4F22Q6NT55 531 aa13.91□□□□□ -0.18
TPM1-227ENST00000560970 PLBD2Q8NHP8 589 aa13.91□□□□□ -0.18
TPM1-227ENST00000560970 BCL2L13Q9BXK5 485 aa13.91□□□□□ -0.18
TPM1-227ENST00000560970 ECM29Q5VYK3 1845 aa13.91□□□□□ -0.18
TPM1-227ENST00000560970 GRM1Q13255 1194 aa13.9□□□□□ -0.18
TPM1-227ENST00000560970 TNIP1Q15025 636 aa13.9□□□□□ -0.18
TPM1-227ENST00000560970 CST9Q5W186 159 aa13.9□□□□□ -0.18
TPM1-227ENST00000560970 DIEXFQ68CQ4 756 aaKnown RBP13.9□□□□□ -0.18
TPM1-227ENST00000560970 BEGAINQ9BUH8 593 aa13.9□□□□□ -0.18
TPM1-227ENST00000560970 DBF4Q9UBU7 674 aaPredicted RBP13.9□□□□□ -0.18
TPM1-227ENST00000560970 LAS1LQ9Y4W2 734 aaKnown RBP13.9□□□□□ -0.18
TPM1-227ENST00000560970 ZNF609O15014 1411 aa13.9□□□□□ -0.19
TPM1-227ENST00000560970 PAPPA2Q9BXP8 1791 aa13.89□□□□□ -0.19
TPM1-227ENST00000560970 YDJCA8MPS7 323 aa13.89□□□□□ -0.19
TPM1-227ENST00000560970 RAD17O75943 681 aa13.89□□□□□ -0.19
TPM1-227ENST00000560970 TRPM4Q8TD43 1214 aa13.89□□□□□ -0.19
TPM1-227ENST00000560970 ISCA1Q9BUE6 129 aa13.89□□□□□ -0.19
TPM1-227ENST00000560970 GLIS2Q9BZE0 524 aaPredicted RBP13.89□□□□□ -0.19
TPM1-227ENST00000560970 CELF2O95319 508 aaKnown RBP13.88□□□□□ -0.19
TPM1-227ENST00000560970 ZNF853P0CG23 659 aa13.88□□□□□ -0.19
TPM1-227ENST00000560970 SAPCD2Q86UD0 394 aa13.88□□□□□ -0.19
TPM1-227ENST00000560970 ZC3H15Q8WU90 426 aaKnown RBP13.88□□□□□ -0.19
TPM1-227ENST00000560970 HHIPL1Q96JK4 782 aa13.88□□□□□ -0.19
TPM1-227ENST00000560970 GPR101Q96P66 508 aaPredicted RBP13.88□□□□□ -0.19
TPM1-227ENST00000560970 PGAP2Q9UHJ9 254 aa13.88□□□□□ -0.19
TPM1-227ENST00000560970 LAMB1P07942 1786 aa13.88□□□□□ -0.19
TPM1-227ENST00000560970 CCER2I3L3R5 266 aa13.87□□□□□ -0.19
TPM1-227ENST00000560970 SF3B3Q15393 1217 aaKnown RBP13.87□□□□□ -0.19
TPM1-227ENST00000560970 CCDC27Q2M243 656 aa13.87□□□□□ -0.19
TPM1-227ENST00000560970 ANKRD13DQ6ZTN6 518 aa13.87□□□□□ -0.19
TPM1-227ENST00000560970 MICALL2Q8IY33 904 aa13.87□□□□□ -0.19
TPM1-227ENST00000560970 CELF1Q92879 486 aaKnown RBP13.87□□□□□ -0.19
TPM1-227ENST00000560970 ZNF428Q96B54 188 aa13.87□□□□□ -0.19
TPM1-227ENST00000560970 CFAP44Q96MT7 982 aa13.87□□□□□ -0.19
TPM1-227ENST00000560970 MBIPQ9NS73 344 aa13.87□□□□□ -0.19
TPM1-227ENST00000560970 HYPKQ9NX55 129 aa13.87□□□□□ -0.19
TPM1-227ENST00000560970 ATP5J2-PTCD1G3V325 749 aa13.86□□□□□ -0.19
TPM1-227ENST00000560970 CA12O43570 354 aa13.86□□□□□ -0.19
TPM1-227ENST00000560970 MAP2K2P36507 400 aa13.86□□□□□ -0.19
TPM1-227ENST00000560970 WASHC4Q2M389 1173 aa13.86□□□□□ -0.19
TPM1-227ENST00000560970 WWC1Q8IX03 1113 aa13.86□□□□□ -0.19
TPM1-227ENST00000560970 MIER1Q8N108 512 aa13.86□□□□□ -0.19
TPM1-227ENST00000560970 FAM89AQ96GI7 184 aa13.86□□□□□ -0.19
TPM1-227ENST00000560970 ABHD8Q96I13 439 aa13.86□□□□□ -0.19
TPM1-227ENST00000560970 ZNF408Q9H9D4 720 aa13.86□□□□□ -0.19
TPM1-227ENST00000560970 IFT57Q9NWB7 429 aa13.86□□□□□ -0.19
TPM1-227ENST00000560970 SALL2Q9Y467 1007 aaPredicted RBP13.86□□□□□ -0.19
TPM1-227ENST00000560970 RTL9Q8NET4 1388 aa13.85□□□□□ -0.19
TPM1-227ENST00000560970 SHTN1A0MZ66 631 aa13.85□□□□□ -0.19
TPM1-227ENST00000560970 H7C1D1 291 aa13.85□□□□□ -0.19
TPM1-227ENST00000560970 AOC2O75106 756 aa13.85□□□□□ -0.19
TPM1-227ENST00000560970 HIRAP54198 1017 aaPredicted RBP13.85□□□□□ -0.19
TPM1-227ENST00000560970 BRPF1P55201 1214 aaPredicted RBP13.85□□□□□ -0.19
TPM1-227ENST00000560970 GOLGA2Q08379 1002 aa13.85□□□□□ -0.19
TPM1-227ENST00000560970 DUSP27Q5VZP5 1158 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms