RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 MSL1Q68DK7 614 aa7.57□□□□□ -1.2
LRRC28-218ENST00000560236 FOXD4L3Q6VB84 417 aaPredicted RBP7.57□□□□□ -1.2
LRRC28-218ENST00000560236 DHX32Q7L7V1 743 aaKnown RBP7.57□□□□□ -1.2
LRRC28-218ENST00000560236 ZFATQ9P243 1243 aa7.57□□□□□ -1.2
LRRC28-218ENST00000560236 MICAL2O94851 1124 aa7.56□□□□□ -1.2
LRRC28-218ENST00000560236 H2AFB1P0C5Y9 115 aa7.56□□□□□ -1.2
LRRC28-218ENST00000560236 H2AFB2P0C5Z0 115 aa7.56□□□□□ -1.2
LRRC28-218ENST00000560236 RARAP10276 462 aa7.56□□□□□ -1.2
LRRC28-218ENST00000560236 TARSP26639 723 aaKnown RBP7.56□□□□□ -1.2
LRRC28-218ENST00000560236 C11orf91Q3C1V1 193 aa7.56□□□□□ -1.2
LRRC28-218ENST00000560236 PERM1Q5SV97 790 aa7.56□□□□□ -1.2
LRRC28-218ENST00000560236 ELMSAN1Q6PJG2 1045 aa7.56□□□□□ -1.2
LRRC28-218ENST00000560236 FAM200AQ8TCP9 573 aa7.56□□□□□ -1.2
LRRC28-218ENST00000560236 TRPM4Q8TD43 1214 aa7.56□□□□□ -1.2
LRRC28-218ENST00000560236 LPIN3Q9BQK8 851 aa7.56□□□□□ -1.2
LRRC28-218ENST00000560236 C11orf16Q9NQ32 467 aa7.56□□□□□ -1.2
LRRC28-218ENST00000560236 FRRS1LQ9P0K9 344 aa7.56□□□□□ -1.2
LRRC28-218ENST00000560236 ZBTB42B2RXF5 422 aa7.55□□□□□ -1.2
LRRC28-218ENST00000560236 SASH3O75995 380 aa7.55□□□□□ -1.2
LRRC28-218ENST00000560236 MLLT1Q03111 559 aaPredicted RBP7.55□□□□□ -1.2
LRRC28-218ENST00000560236 ILDR2Q71H61 639 aa7.55□□□□□ -1.2
LRRC28-218ENST00000560236 DTWD1Q8N5C7 304 aa7.55□□□□□ -1.2
LRRC28-218ENST00000560236 IFT43Q96FT9 208 aa7.55□□□□□ -1.2
LRRC28-218ENST00000560236 MYO19Q96H55 970 aa7.55□□□□□ -1.2
LRRC28-218ENST00000560236 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.55□□□□□ -1.2
LRRC28-218ENST00000560236 ARID4AP29374 1257 aaPredicted RBP7.54□□□□□ -1.2
LRRC28-218ENST00000560236 WFDC8Q8IUA0 241 aa7.54□□□□□ -1.2
LRRC28-218ENST00000560236 TP53INP1Q96A56 240 aa7.54□□□□□ -1.2
LRRC28-218ENST00000560236 RFX1P22670 979 aa7.53□□□□□ -1.2
LRRC28-218ENST00000560236 GPLD1P80108 840 aa7.53□□□□□ -1.2
LRRC28-218ENST00000560236 GRIK5Q16478 980 aa7.53□□□□□ -1.2
LRRC28-218ENST00000560236 FBXO11Q86XK2 927 aa7.53□□□□□ -1.2
LRRC28-218ENST00000560236 RTCBQ9Y3I0 505 aaKnown RBP7.53□□□□□ -1.2
LRRC28-218ENST00000560236 OPLAHO14841 1288 aa7.52□□□□□ -1.21
LRRC28-218ENST00000560236 PLAURQ03405 335 aa7.52□□□□□ -1.21
LRRC28-218ENST00000560236 CFAP70Q5T0N1 1121 aa7.52□□□□□ -1.21
LRRC28-218ENST00000560236 ARTNQ5T4W7 220 aa7.52□□□□□ -1.21
LRRC28-218ENST00000560236 TTC9Q92623 222 aa7.52□□□□□ -1.21
LRRC28-218ENST00000560236 SMG9Q9H0W8 520 aaKnown RBP7.52□□□□□ -1.21
LRRC28-218ENST00000560236 ZFP64Q9NPA5 681 aa7.52□□□□□ -1.21
LRRC28-218ENST00000560236 USP20Q9Y2K6 914 aa7.52□□□□□ -1.21
LRRC28-218ENST00000560236 XYLBO75191 536 aa7.51□□□□□ -1.21
LRRC28-218ENST00000560236 EIF2AK2P19525 551 aaKnown RBP7.51□□□□□ -1.21
LRRC28-218ENST00000560236 NRLP54845 237 aa7.51□□□□□ -1.21
LRRC28-218ENST00000560236 CDCA8Q53HL2 280 aa7.51□□□□□ -1.21
LRRC28-218ENST00000560236 HFE2Q6ZVN8 426 aa7.51□□□□□ -1.21
LRRC28-218ENST00000560236 SSBP4Q9BWG4 385 aaPredicted RBP7.51□□□□□ -1.21
LRRC28-218ENST00000560236 KRTAP4-8Q9BYQ9 185 aa7.51□□□□□ -1.21
LRRC28-218ENST00000560236 LRFN2Q9ULH4 789 aa7.51□□□□□ -1.21
LRRC28-218ENST00000560236 TREML1Q86YW5 311 aa7.5□□□□□ -1.21
LRRC28-218ENST00000560236 RGL4Q8IZJ4 473 aa7.5□□□□□ -1.21
LRRC28-218ENST00000560236 CMTR1Q8N1G2 835 aaKnown RBP7.5□□□□□ -1.21
LRRC28-218ENST00000560236 WFDC12Q8WWY7 111 aa7.5□□□□□ -1.21
LRRC28-218ENST00000560236 TLR7Q9NYK1 1049 aaKnown RBP7.5□□□□□ -1.21
LRRC28-218ENST00000560236 ZNF777Q9ULD5 760 aaPredicted RBP7.5□□□□□ -1.21
LRRC28-218ENST00000560236 NOVA2Q9UNW9 492 aaKnown RBP7.5□□□□□ -1.21
LRRC28-218ENST00000560236 EGFRP00533 1210 aa7.49□□□□□ -1.21
LRRC28-218ENST00000560236 IREB2P48200 963 aaKnown RBP7.49□□□□□ -1.21
LRRC28-218ENST00000560236 FKBP5Q13451 457 aaPredicted RBP7.49□□□□□ -1.21
LRRC28-218ENST00000560236 IGF2-ASQ6U949 168 aa7.49□□□□□ -1.21
LRRC28-218ENST00000560236 PSMG3-AS1Q96PY0 264 aa7.49□□□□□ -1.21
LRRC28-218ENST00000560236 PSAPP07602 524 aa7.48□□□□□ -1.21
LRRC28-218ENST00000560236 COX20Q5RI15 118 aa7.48□□□□□ -1.21
LRRC28-218ENST00000560236 PRIMPOLQ96LW4 560 aa7.48□□□□□ -1.21
LRRC28-218ENST00000560236 J3QW42 95 aa7.47□□□□□ -1.21
LRRC28-218ENST00000560236 DEAF1O75398 565 aaPredicted RBP7.47□□□□□ -1.21
LRRC28-218ENST00000560236 NOS3P29474 1203 aa7.47□□□□□ -1.21
LRRC28-218ENST00000560236 NBPF11Q86T75 865 aa7.47□□□□□ -1.21
LRRC28-218ENST00000560236 PLD4Q96BZ4 506 aa7.47□□□□□ -1.21
LRRC28-218ENST00000560236 NSUN5Q96P11 429 aaKnown RBP7.47□□□□□ -1.21
LRRC28-218ENST00000560236 LOC102724428A0A0B4J2F2 783 aa7.46□□□□□ -1.22
LRRC28-218ENST00000560236 PRMT3O60678 531 aa7.46□□□□□ -1.22
LRRC28-218ENST00000560236 MMP20O60882 483 aa7.46□□□□□ -1.22
LRRC28-218ENST00000560236 SIK1P57059 783 aa7.46□□□□□ -1.22
LRRC28-218ENST00000560236 LRP8Q14114 963 aa7.46□□□□□ -1.22
LRRC28-218ENST00000560236 SWI5Q1ZZU3 235 aa7.46□□□□□ -1.22
LRRC28-218ENST00000560236 KCNMB2Q9Y691 235 aa7.46□□□□□ -1.22
LRRC28-218ENST00000560236 ACIN1Q9UKV3 1341 aaKnown RBP7.46□□□□□ -1.22
LRRC28-218ENST00000560236 DLL1O00548 723 aa7.45□□□□□ -1.22
LRRC28-218ENST00000560236 GHRHP01286 108 aa7.45□□□□□ -1.22
LRRC28-218ENST00000560236 SOX18P35713 384 aa7.45□□□□□ -1.22
LRRC28-218ENST00000560236 GDF6Q6KF10 455 aaPredicted RBP7.45□□□□□ -1.22
LRRC28-218ENST00000560236 RBSNQ9H1K0 784 aa7.45□□□□□ -1.22
LRRC28-218ENST00000560236 BRD2P25440 801 aaKnown RBP7.44□□□□□ -1.22
LRRC28-218ENST00000560236 ETFBKMTQ8IXQ9 262 aa7.44□□□□□ -1.22
LRRC28-218ENST00000560236 IL22RA1Q8N6P7 574 aa7.44□□□□□ -1.22
LRRC28-218ENST00000560236 MEGF10Q96KG7 1140 aa7.44□□□□□ -1.22
LRRC28-218ENST00000560236 HOXD8P13378 290 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-218ENST00000560236 OCLNQ16625 522 aa7.43□□□□□ -1.22
LRRC28-218ENST00000560236 C16orf46Q6P387 395 aa7.43□□□□□ -1.22
LRRC28-218ENST00000560236 NLRP13Q86W25 1043 aa7.43□□□□□ -1.22
LRRC28-218ENST00000560236 SAP130Q9H0E3 1048 aa7.43□□□□□ -1.22
LRRC28-218ENST00000560236 AKTIPQ9H8T0 292 aa7.43□□□□□ -1.22
LRRC28-218ENST00000560236 HYAL3O43820 417 aaPredicted RBP7.42□□□□□ -1.22
LRRC28-218ENST00000560236 ELOAQ14241 798 aaKnown RBP7.42□□□□□ -1.22
LRRC28-218ENST00000560236 DCAF11Q8TEB1 546 aa7.42□□□□□ -1.22
LRRC28-218ENST00000560236 MRPL18Q9H0U6 180 aaKnown RBP7.42□□□□□ -1.22
LRRC28-218ENST00000560236 SRA1Q9HD15 236 aaKnown RBP7.42□□□□□ -1.22
LRRC28-218ENST00000560236 ZMIZ1Q9ULJ6 1067 aa7.42□□□□□ -1.22
LRRC28-218ENST00000560236 FAM69CQ0P6D2 419 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms