RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 NIP7Q9Y221 180 aaKnown RBP eCLIP16.83■□□□□ 0.28
TPM1-215ENST00000558868 ANKRD18BA2A2Z9 1011 aa16.82■□□□□ 0.28
TPM1-215ENST00000558868 REC8O95072 547 aa16.82■□□□□ 0.28
TPM1-215ENST00000558868 TFCP2Q12800 502 aa16.82■□□□□ 0.28
TPM1-215ENST00000558868 TNNI3KQ59H18 835 aa16.82■□□□□ 0.28
TPM1-215ENST00000558868 SUSD4Q5VX71 490 aa16.82■□□□□ 0.28
TPM1-215ENST00000558868 TSHZ3Q63HK5 1081 aa16.82■□□□□ 0.28
TPM1-215ENST00000558868 EAF2Q96CJ1 260 aaPredicted RBP16.82■□□□□ 0.28
TPM1-215ENST00000558868 NARFQ9UHQ1 456 aa16.82■□□□□ 0.28
TPM1-215ENST00000558868 FPGT-TNNI3KV9GXZ4 949 aa16.82■□□□□ 0.28
TPM1-215ENST00000558868 TUBGCP6Q96RT7 1819 aa16.82■□□□□ 0.28
TPM1-215ENST00000558868 GNPATO15228 680 aa16.81■□□□□ 0.28
TPM1-215ENST00000558868 ZPR1O75312 459 aa16.81■□□□□ 0.28
TPM1-215ENST00000558868 RBM25P49756 843 aaKnown RBP16.81■□□□□ 0.28
TPM1-215ENST00000558868 DEFB132Q7Z7B7 95 aa16.81■□□□□ 0.28
TPM1-215ENST00000558868 TTLL11Q8NHH1 800 aa16.81■□□□□ 0.28
TPM1-215ENST00000558868 BRWD3Q6RI45 1802 aa16.81■□□□□ 0.28
TPM1-215ENST00000558868 TAF1LQ8IZX4 1826 aa16.8■□□□□ 0.28
TPM1-215ENST00000558868 ADRA2BP18089 450 aa16.8■□□□□ 0.28
TPM1-215ENST00000558868 BECN1Q14457 450 aa16.8■□□□□ 0.28
TPM1-215ENST00000558868 ATG9AQ7Z3C6 839 aa16.8■□□□□ 0.28
TPM1-215ENST00000558868 CCDC8Q9H0W5 538 aaPredicted RBP16.8■□□□□ 0.28
TPM1-215ENST00000558868 CEP126Q9P2H0 1117 aa16.8■□□□□ 0.28
TPM1-215ENST00000558868 AKAP2Q9Y2D5 859 aa16.8■□□□□ 0.28
TPM1-215ENST00000558868 MYH3P11055 1940 aa16.8■□□□□ 0.28
TPM1-215ENST00000558868 SCN7AQ01118 1682 aa16.79■□□□□ 0.28
TPM1-215ENST00000558868 KCNQ4P56696 695 aa16.79■□□□□ 0.28
TPM1-215ENST00000558868 C4BP0C0L5 1744 aa16.79■□□□□ 0.28
TPM1-215ENST00000558868 HIP1O00291 1037 aa16.78■□□□□ 0.28
TPM1-215ENST00000558868 NTSR2O95665 410 aa16.78■□□□□ 0.28
TPM1-215ENST00000558868 ITGA6P23229 1130 aa16.78■□□□□ 0.28
TPM1-215ENST00000558868 CHMLP26374 656 aa16.78■□□□□ 0.28
TPM1-215ENST00000558868 TRAPPC3LQ5T215 181 aa16.78■□□□□ 0.28
TPM1-215ENST00000558868 EVI5LQ96CN4 794 aa16.78■□□□□ 0.28
TPM1-215ENST00000558868 NYXQ9GZU5 481 aa16.78■□□□□ 0.28
TPM1-215ENST00000558868 EPB41L2O43491 1005 aaKnown RBP16.77■□□□□ 0.28
TPM1-215ENST00000558868 TRIM37O94972 964 aa16.77■□□□□ 0.28
TPM1-215ENST00000558868 ATP5JP18859 108 aa16.77■□□□□ 0.28
TPM1-215ENST00000558868 CCDC152Q4G0S7 254 aa16.77■□□□□ 0.28
TPM1-215ENST00000558868 ERICH6Q7L0X2 663 aa16.77■□□□□ 0.28
TPM1-215ENST00000558868 CCDC125Q86Z20 511 aa16.77■□□□□ 0.28
TPM1-215ENST00000558868 SYNE4Q8N205 404 aa16.77■□□□□ 0.28
TPM1-215ENST00000558868 ZNF594Q96JF6 807 aaPredicted RBP16.77■□□□□ 0.28
TPM1-215ENST00000558868 ESYT1Q9BSJ8 1104 aa16.77■□□□□ 0.28
TPM1-215ENST00000558868 RTL9Q8NET4 1388 aa16.77■□□□□ 0.27
TPM1-215ENST00000558868 RFC4P35249 363 aa16.76■□□□□ 0.27
TPM1-215ENST00000558868 LRRC24Q50LG9 513 aa16.76■□□□□ 0.27
TPM1-215ENST00000558868 USPL1Q5W0Q7 1092 aa16.76■□□□□ 0.27
TPM1-215ENST00000558868 RUFY2Q8WXA3 655 aa16.76■□□□□ 0.27
TPM1-215ENST00000558868 SETDB2Q96T68 719 aa16.76■□□□□ 0.27
TPM1-215ENST00000558868 GREM2Q9H772 168 aa16.76■□□□□ 0.27
TPM1-215ENST00000558868 AK9Q5TCS8 1911 aa16.76■□□□□ 0.27
TPM1-215ENST00000558868 LAMB2P55268 1798 aa16.75■□□□□ 0.27
TPM1-215ENST00000558868 FAM177BA6PVY3 158 aa16.75■□□□□ 0.27
TPM1-215ENST00000558868 LDHAL6AQ6ZMR3 332 aa16.75■□□□□ 0.27
TPM1-215ENST00000558868 TICAM2Q86XR7 235 aa16.75■□□□□ 0.27
TPM1-215ENST00000558868 ARHGEF1Q92888 912 aaKnown RBP16.75■□□□□ 0.27
TPM1-215ENST00000558868 USP26Q9BXU7 913 aa16.75■□□□□ 0.27
TPM1-215ENST00000558868 CNNM1Q9NRU3 951 aa16.75■□□□□ 0.27
TPM1-215ENST00000558868 TLR7Q9NYK1 1049 aaKnown RBP16.75■□□□□ 0.27
TPM1-215ENST00000558868 DBNLQ9UJU6 430 aaKnown RBP16.75■□□□□ 0.27
TPM1-215ENST00000558868 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.75■□□□□ 0.27
TPM1-215ENST00000558868 ZNF609O15014 1411 aa16.74■□□□□ 0.27
TPM1-215ENST00000558868 HCLS1P14317 486 aaPredicted RBP16.74■□□□□ 0.27
TPM1-215ENST00000558868 GTF2E1P29083 439 aaPredicted RBP16.74■□□□□ 0.27
TPM1-215ENST00000558868 NEUROD6Q96NK8 337 aa16.74■□□□□ 0.27
TPM1-215ENST00000558868 CCDC85AQ96PX6 553 aaPredicted RBP16.74■□□□□ 0.27
TPM1-215ENST00000558868 PUS3Q9BZE2 481 aaKnown RBP16.74■□□□□ 0.27
TPM1-215ENST00000558868 DIAPH3Q9NSV4 1193 aa16.74■□□□□ 0.27
TPM1-215ENST00000558868 MROH5Q6ZUA9 1318 aa16.73■□□□□ 0.27
TPM1-215ENST00000558868 MSH5O43196 834 aa16.73■□□□□ 0.27
TPM1-215ENST00000558868 MAP4K4O95819 1239 aaPredicted RBP16.73■□□□□ 0.27
TPM1-215ENST00000558868 MCCP23508 829 aa16.73■□□□□ 0.27
TPM1-215ENST00000558868 METTL24Q5JXM2 366 aa16.73■□□□□ 0.27
TPM1-215ENST00000558868 SLC10A5Q5PT55 438 aa16.73■□□□□ 0.27
TPM1-215ENST00000558868 TBC1D9BQ66K14 1250 aa16.73■□□□□ 0.27
TPM1-215ENST00000558868 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.73■□□□□ 0.27
TPM1-215ENST00000558868 DBNDD2Q9BQY9 259 aa16.73■□□□□ 0.27
TPM1-215ENST00000558868 BCL2L12Q9HB09 334 aa16.73■□□□□ 0.27
TPM1-215ENST00000558868 LRRC4BQ9NT99 713 aa16.73■□□□□ 0.27
TPM1-215ENST00000558868 RIPOR2Q9Y4F9 1068 aa16.73■□□□□ 0.27
TPM1-215ENST00000558868 CEP350Q5VT06 3117 aa16.73■□□□□ 0.27
TPM1-215ENST00000558868 A0A1B0GUL7 405 aa16.72■□□□□ 0.27
TPM1-215ENST00000558868 PLSCR1O15162 318 aa16.72■□□□□ 0.27
TPM1-215ENST00000558868 SSFA2P28290 1259 aa16.72■□□□□ 0.27
TPM1-215ENST00000558868 TPTE2Q6XPS3 522 aa16.72■□□□□ 0.27
TPM1-215ENST00000558868 CDC5LQ99459 802 aaKnown RBP16.72■□□□□ 0.27
TPM1-215ENST00000558868 BOLA2Q9H3K6 86 aa16.72■□□□□ 0.27
TPM1-215ENST00000558868 SRP68Q9UHB9 627 aaKnown RBP16.72■□□□□ 0.27
TPM1-215ENST00000558868 DDX60Q8IY21 1712 aaKnown RBP16.71■□□□□ 0.27
TPM1-215ENST00000558868 IGHMBP2P38935 993 aaKnown RBP16.71■□□□□ 0.27
TPM1-215ENST00000558868 SF3B3Q15393 1217 aaKnown RBP16.71■□□□□ 0.27
TPM1-215ENST00000558868 CCDC158Q5M9N0 1113 aa16.71■□□□□ 0.27
TPM1-215ENST00000558868 GORABQ5T7V8 394 aa16.71■□□□□ 0.27
TPM1-215ENST00000558868 BICDL1Q6ZP65 573 aa16.71■□□□□ 0.27
TPM1-215ENST00000558868 NBPF5PQ86XG9 351 aaPredicted RBP16.71■□□□□ 0.27
TPM1-215ENST00000558868 MPHOSPH8Q99549 860 aa16.71■□□□□ 0.27
TPM1-215ENST00000558868 HAUS7Q99871 368 aa16.71■□□□□ 0.27
TPM1-215ENST00000558868 RFX7Q2KHR2 1363 aa16.71■□□□□ 0.27
TPM1-215ENST00000558868 ABCC12Q96J65 1359 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms