RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 TNFRSF10BO14763 440 aa7.59□□□□□ -1.19
CASC4-206ENST00000558847 TBC1D8BQ0IIM8 1120 aa7.59□□□□□ -1.19
CASC4-206ENST00000558847 DGKZQ13574 1117 aa7.59□□□□□ -1.19
CASC4-206ENST00000558847 COX20Q5RI15 118 aa7.59□□□□□ -1.19
CASC4-206ENST00000558847 SAP130Q9H0E3 1048 aa7.59□□□□□ -1.19
CASC4-206ENST00000558847 BRD7Q9NPI1 651 aa7.59□□□□□ -1.19
CASC4-206ENST00000558847 SEPT3Q9UH03 358 aa7.59□□□□□ -1.19
CASC4-206ENST00000558847 DMGDHQ9UI17 866 aaKnown RBP7.59□□□□□ -1.19
CASC4-206ENST00000558847 PTCD1O75127 700 aaKnown RBP7.58□□□□□ -1.2
CASC4-206ENST00000558847 HIF1AQ16665 826 aa7.58□□□□□ -1.2
CASC4-206ENST00000558847 ADARB2-AS1A8MUL3 147 aa7.57□□□□□ -1.2
CASC4-206ENST00000558847 FAM229AH3BQW9 127 aa7.57□□□□□ -1.2
CASC4-206ENST00000558847 ADH7P40394 386 aa7.57□□□□□ -1.2
CASC4-206ENST00000558847 TRIM28Q13263 835 aaKnown RBP7.57□□□□□ -1.2
CASC4-206ENST00000558847 FAM26DQ5JW98 314 aa7.57□□□□□ -1.2
CASC4-206ENST00000558847 C16orf46Q6P387 395 aa7.57□□□□□ -1.2
CASC4-206ENST00000558847 BTLAQ7Z6A9 289 aa7.57□□□□□ -1.2
CASC4-206ENST00000558847 ALBP02768 609 aa7.56□□□□□ -1.2
CASC4-206ENST00000558847 GRNP28799 593 aaKnown RBP7.56□□□□□ -1.2
CASC4-206ENST00000558847 C8orf86Q6ZUL3 223 aa7.56□□□□□ -1.2
CASC4-206ENST00000558847 TNFRSF25Q93038 417 aa7.56□□□□□ -1.2
CASC4-206ENST00000558847 BHMTQ93088 406 aa7.56□□□□□ -1.2
CASC4-206ENST00000558847 IGFLR1Q9H665 355 aa7.56□□□□□ -1.2
CASC4-206ENST00000558847 KCNH4Q9UQ05 1017 aa7.56□□□□□ -1.2
CASC4-206ENST00000558847 KCNQ4P56696 695 aa7.55□□□□□ -1.2
CASC4-206ENST00000558847 NAA30Q147X3 362 aaPredicted RBP7.55□□□□□ -1.2
CASC4-206ENST00000558847 C11orf91Q3C1V1 193 aa7.55□□□□□ -1.2
CASC4-206ENST00000558847 ETFBKMTQ8IXQ9 262 aa7.55□□□□□ -1.2
CASC4-206ENST00000558847 MICALL1Q8N3F8 863 aa7.55□□□□□ -1.2
CASC4-206ENST00000558847 RGS22Q8NE09 1264 aa7.55□□□□□ -1.2
CASC4-206ENST00000558847 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.55□□□□□ -1.2
CASC4-206ENST00000558847 EGFL7Q9UHF1 273 aa7.55□□□□□ -1.2
CASC4-206ENST00000558847 ERCC3P19447 782 aa7.54□□□□□ -1.2
CASC4-206ENST00000558847 INPP5BP32019 993 aa7.54□□□□□ -1.2
CASC4-206ENST00000558847 TRAPPC3LQ5T215 181 aa7.54□□□□□ -1.2
CASC4-206ENST00000558847 NACC1Q96RE7 527 aa7.54□□□□□ -1.2
CASC4-206ENST00000558847 UBE2OQ9C0C9 1292 aaKnown RBP7.54□□□□□ -1.2
CASC4-206ENST00000558847 IDH3AP50213 366 aa7.53□□□□□ -1.2
CASC4-206ENST00000558847 ZMYM1Q5SVZ6 1142 aa7.53□□□□□ -1.2
CASC4-206ENST00000558847 HELQQ8TDG4 1101 aa7.53□□□□□ -1.2
CASC4-206ENST00000558847 IFT43Q96FT9 208 aa7.53□□□□□ -1.2
CASC4-206ENST00000558847 MDFIQ99750 246 aa7.53□□□□□ -1.2
CASC4-206ENST00000558847 STARD13Q9Y3M8 1113 aa7.53□□□□□ -1.2
CASC4-206ENST00000558847 LILRB5O75023 590 aa7.52□□□□□ -1.21
CASC4-206ENST00000558847 MICAL2O94851 1124 aa7.52□□□□□ -1.21
CASC4-206ENST00000558847 GRIK4Q16099 956 aa7.52□□□□□ -1.21
CASC4-206ENST00000558847 AMOTL2Q9Y2J4 779 aa7.52□□□□□ -1.21
CASC4-206ENST00000558847 SCO2A0A1W2PP80 73 aa7.51□□□□□ -1.21
CASC4-206ENST00000558847 SOWAHDA6NJG2 315 aa7.51□□□□□ -1.21
CASC4-206ENST00000558847 TREML1Q86YW5 311 aa7.51□□□□□ -1.21
CASC4-206ENST00000558847 GTF3C2Q8WUA4 911 aaPredicted RBP7.51□□□□□ -1.21
CASC4-206ENST00000558847 PNMA5Q96PV4 448 aa7.51□□□□□ -1.21
CASC4-206ENST00000558847 PRDM6Q9NQX0 595 aa7.51□□□□□ -1.21
CASC4-206ENST00000558847 TPSG1Q9NRR2 321 aa7.51□□□□□ -1.21
CASC4-206ENST00000558847 OPLAHO14841 1288 aa7.5□□□□□ -1.21
CASC4-206ENST00000558847 NID1P14543 1247 aa7.5□□□□□ -1.21
CASC4-206ENST00000558847 ITGB7P26010 798 aa7.5□□□□□ -1.21
CASC4-206ENST00000558847 ARSDP51689 593 aa7.5□□□□□ -1.21
CASC4-206ENST00000558847 JPH1Q9HDC5 661 aaPredicted RBP7.5□□□□□ -1.21
CASC4-206ENST00000558847 STIM2Q9P246 746 aa7.5□□□□□ -1.21
CASC4-206ENST00000558847 BRD2P25440 801 aaKnown RBP7.49□□□□□ -1.21
CASC4-206ENST00000558847 SF3B2Q13435 895 aaKnown RBP7.49□□□□□ -1.21
CASC4-206ENST00000558847 MTMR3Q13615 1198 aa7.49□□□□□ -1.21
CASC4-206ENST00000558847 COL9A3Q14050 684 aaPredicted RBP7.49□□□□□ -1.21
CASC4-206ENST00000558847 RSPO4Q2I0M5 234 aaPredicted RBP7.49□□□□□ -1.21
CASC4-206ENST00000558847 NUDT8Q8WV74 236 aa7.49□□□□□ -1.21
CASC4-206ENST00000558847 ZBTB39O15060 712 aa7.48□□□□□ -1.21
CASC4-206ENST00000558847 C20orf204Q6ZNR8 217 aa7.48□□□□□ -1.21
CASC4-206ENST00000558847 BIN2Q9UBW5 565 aaPredicted RBP7.48□□□□□ -1.21
CASC4-206ENST00000558847 C9orf172C9J069 976 aa7.47□□□□□ -1.21
CASC4-206ENST00000558847 ABL1P00519 1130 aa7.47□□□□□ -1.21
CASC4-206ENST00000558847 EPB42P16452 691 aa7.47□□□□□ -1.21
CASC4-206ENST00000558847 NPR3P17342 541 aa7.47□□□□□ -1.21
CASC4-206ENST00000558847 MPSTP25325 297 aa7.47□□□□□ -1.21
CASC4-206ENST00000558847 ZAP70P43403 619 aa7.47□□□□□ -1.21
CASC4-206ENST00000558847 SERPINB4P48594 390 aa7.47□□□□□ -1.21
CASC4-206ENST00000558847 RAC1P63000 192 aa7.47□□□□□ -1.21
CASC4-206ENST00000558847 ZNF211Q13398 564 aaPredicted RBP7.47□□□□□ -1.21
CASC4-206ENST00000558847 NKAPLQ5M9Q1 402 aa7.47□□□□□ -1.21
CASC4-206ENST00000558847 GLYCTKQ8IVS8 523 aa7.47□□□□□ -1.21
CASC4-206ENST00000558847 ABTB2Q8N961 1025 aa7.47□□□□□ -1.21
CASC4-206ENST00000558847 SLC6A14Q9UN76 642 aa7.47□□□□□ -1.21
CASC4-206ENST00000558847 USP20Q9Y2K6 914 aa7.47□□□□□ -1.21
CASC4-206ENST00000558847 DYRK3O43781 588 aa7.46□□□□□ -1.22
CASC4-206ENST00000558847 ICMTO60725 284 aa7.46□□□□□ -1.22
CASC4-206ENST00000558847 NFKB1P19838 968 aa7.46□□□□□ -1.22
CASC4-206ENST00000558847 TRIP4Q15650 581 aaPredicted RBP7.46□□□□□ -1.22
CASC4-206ENST00000558847 GSX2Q9BZM3 304 aa7.46□□□□□ -1.22
CASC4-206ENST00000558847 DNAJB12Q9NXW2 375 aaKnown RBP7.46□□□□□ -1.22
CASC4-206ENST00000558847 RTCBQ9Y3I0 505 aaKnown RBP7.46□□□□□ -1.22
CASC4-206ENST00000558847 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.46□□□□□ -1.22
CASC4-206ENST00000558847 KCNMB2Q9Y691 235 aa7.46□□□□□ -1.22
CASC4-206ENST00000558847 A0A0A0MRY4 1105 aa7.45□□□□□ -1.22
CASC4-206ENST00000558847 FKBP4Q02790 459 aaKnown RBP eCLIP7.45□□□□□ -1.22
CASC4-206ENST00000558847 PSAPL1Q6NUJ1 521 aa7.45□□□□□ -1.22
CASC4-206ENST00000558847 RGL4Q8IZJ4 473 aa7.45□□□□□ -1.22
CASC4-206ENST00000558847 EFCC1Q9HA90 598 aa7.45□□□□□ -1.22
CASC4-206ENST00000558847 C11orf16Q9NQ32 467 aa7.45□□□□□ -1.22
CASC4-206ENST00000558847 USP21Q9UK80 565 aa7.45□□□□□ -1.22
CASC4-206ENST00000558847 H3BRB1 525 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms