RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 PDE8AO60658 829 aa17.58■□□□□ 0.4
TSPAN3-205ENST00000558745 CASP7P55210 303 aa17.58■□□□□ 0.4
TSPAN3-205ENST00000558745 TAOK3Q9H2K8 898 aa17.58■□□□□ 0.4
TSPAN3-205ENST00000558745 NOB1Q9ULX3 412 aaKnown RBP17.58■□□□□ 0.4
TSPAN3-205ENST00000558745 SBF1O95248 1867 aa17.58■□□□□ 0.4
TSPAN3-205ENST00000558745 BCAR3O75815 825 aa17.57■□□□□ 0.4
TSPAN3-205ENST00000558745 LMNB1P20700 586 aa17.57■□□□□ 0.4
TSPAN3-205ENST00000558745 GRAPQ13588 217 aa17.57■□□□□ 0.4
TSPAN3-205ENST00000558745 GRAPLQ8TC17 118 aaPredicted RBP17.57■□□□□ 0.4
TSPAN3-205ENST00000558745 ZNF277Q9NRM2 450 aaPredicted RBP17.57■□□□□ 0.4
TSPAN3-205ENST00000558745 CDHR2Q9BYE9 1310 aa17.57■□□□□ 0.4
TSPAN3-205ENST00000558745 CAPN15O75808 1086 aa17.56■□□□□ 0.4
TSPAN3-205ENST00000558745 BBOX1O75936 387 aa17.56■□□□□ 0.4
TSPAN3-205ENST00000558745 CT47B1P0C2W7 299 aaPredicted RBP17.56■□□□□ 0.4
TSPAN3-205ENST00000558745 SOGA3Q5TF21 947 aa17.56■□□□□ 0.4
TSPAN3-205ENST00000558745 FER1L6Q2WGJ9 1857 aa17.56■□□□□ 0.4
TSPAN3-205ENST00000558745 CCDC88AQ3V6T2 1871 aa17.56■□□□□ 0.4
TSPAN3-205ENST00000558745 FKBP4Q02790 459 aaKnown RBP eCLIP17.55■□□□□ 0.4
TSPAN3-205ENST00000558745 RTKN2Q8IZC4 609 aa17.55■□□□□ 0.4
TSPAN3-205ENST00000558745 TTLL11Q8NHH1 800 aa17.55■□□□□ 0.4
TSPAN3-205ENST00000558745 SRCIN1Q9C0H9 1055 aa17.55■□□□□ 0.4
TSPAN3-205ENST00000558745 ATP6V0A2Q9Y487 856 aa17.55■□□□□ 0.4
TSPAN3-205ENST00000558745 PTPRCP08575 1304 aa17.55■□□□□ 0.4
TSPAN3-205ENST00000558745 SP8Q8IXZ3 490 aa17.54■□□□□ 0.4
TSPAN3-205ENST00000558745 DNAJC5GQ8N7S2 189 aa17.54■□□□□ 0.4
TSPAN3-205ENST00000558745 TNNQ9UQP3 1299 aa17.54■□□□□ 0.4
TSPAN3-205ENST00000558745 SNED1Q8TER0 1413 aa17.54■□□□□ 0.4
TSPAN3-205ENST00000558745 CTSWP56202 376 aa17.53■□□□□ 0.4
TSPAN3-205ENST00000558745 RPS8P62241 208 aaKnown RBP17.53■□□□□ 0.4
TSPAN3-205ENST00000558745 CCDC152Q4G0S7 254 aa17.53■□□□□ 0.4
TSPAN3-205ENST00000558745 EPHA10Q5JZY3 1008 aa17.53■□□□□ 0.4
TSPAN3-205ENST00000558745 GREM2Q9H772 168 aa17.53■□□□□ 0.4
TSPAN3-205ENST00000558745 C9orf78Q9NZ63 289 aaPredicted RBP17.53■□□□□ 0.4
TSPAN3-205ENST00000558745 LTBP3Q9NS15 1303 aa17.53■□□□□ 0.4
TSPAN3-205ENST00000558745 GRM8O00222 908 aa17.52■□□□□ 0.4
TSPAN3-205ENST00000558745 ALDH1L1O75891 902 aa17.52■□□□□ 0.4
TSPAN3-205ENST00000558745 NBPF7P0C2Y1 421 aaPredicted RBP17.52■□□□□ 0.4
TSPAN3-205ENST00000558745 COL13A1Q5TAT6 717 aaPredicted RBP17.52■□□□□ 0.4
TSPAN3-205ENST00000558745 CC2D2BQ6DHV5 1058 aa17.52■□□□□ 0.4
TSPAN3-205ENST00000558745 KIF3CO14782 793 aa17.51■□□□□ 0.39
TSPAN3-205ENST00000558745 HSP90B1P14625 803 aaKnown RBP17.51■□□□□ 0.39
TSPAN3-205ENST00000558745 FOXO4P98177 505 aa17.51■□□□□ 0.39
TSPAN3-205ENST00000558745 TNS4Q8IZW8 715 aa17.51■□□□□ 0.39
TSPAN3-205ENST00000558745 PLA2G12BQ9BX93 195 aa17.51■□□□□ 0.39
TSPAN3-205ENST00000558745 CSF1RP07333 972 aa17.5■□□□□ 0.39
TSPAN3-205ENST00000558745 IARSP41252 1262 aaKnown RBP17.5■□□□□ 0.39
TSPAN3-205ENST00000558745 BRPF1P55201 1214 aaPredicted RBP17.5■□□□□ 0.39
TSPAN3-205ENST00000558745 GPSM2P81274 684 aa17.5■□□□□ 0.39
TSPAN3-205ENST00000558745 MPNDQ8N594 471 aa17.5■□□□□ 0.39
TSPAN3-205ENST00000558745 FRAT1Q92837 279 aaPredicted RBP17.5■□□□□ 0.39
TSPAN3-205ENST00000558745 SUCLG2Q96I99 432 aa17.5■□□□□ 0.39
TSPAN3-205ENST00000558745 PSMD1Q99460 953 aa17.5■□□□□ 0.39
TSPAN3-205ENST00000558745 TMX4Q9H1E5 349 aaPredicted RBP17.5■□□□□ 0.39
TSPAN3-205ENST00000558745 FAM161AQ3B820 660 aa17.49■□□□□ 0.39
TSPAN3-205ENST00000558745 DPP8Q6V1X1 898 aaPredicted RBP17.49■□□□□ 0.39
TSPAN3-205ENST00000558745 KAZALD1Q96I82 304 aa17.49■□□□□ 0.39
TSPAN3-205ENST00000558745 NMRK2Q9NPI5 230 aa17.49■□□□□ 0.39
TSPAN3-205ENST00000558745 NSFL1CQ9UNZ2 370 aaKnown RBP17.49■□□□□ 0.39
TSPAN3-205ENST00000558745 LMBR1LQ6UX01 489 aa17.48■□□□□ 0.39
TSPAN3-205ENST00000558745 ANKRD18AQ8IVF6 992 aa17.48■□□□□ 0.39
TSPAN3-205ENST00000558745 GPR101Q96P66 508 aaPredicted RBP17.48■□□□□ 0.39
TSPAN3-205ENST00000558745 USP44Q9H0E7 712 aa17.48■□□□□ 0.39
TSPAN3-205ENST00000558745 CHMP3Q9Y3E7 222 aa17.48■□□□□ 0.39
TSPAN3-205ENST00000558745 WTIPA6NIX2 430 aaPredicted RBP17.47■□□□□ 0.39
TSPAN3-205ENST00000558745 ITGA6P23229 1130 aa17.47■□□□□ 0.39
TSPAN3-205ENST00000558745 AOC3Q16853 763 aa17.47■□□□□ 0.39
TSPAN3-205ENST00000558745 YTHDC1Q96MU7 727 aaKnown RBP17.47■□□□□ 0.39
TSPAN3-205ENST00000558745 API5Q9BZZ5 524 aaKnown RBP17.47■□□□□ 0.39
TSPAN3-205ENST00000558745 RRAGCQ9HB90 399 aa17.47■□□□□ 0.39
TSPAN3-205ENST00000558745 TOMM70O94826 608 aa17.47■□□□□ 0.39
TSPAN3-205ENST00000558745 DDNO94850 711 aaPredicted RBP17.47■□□□□ 0.39
TSPAN3-205ENST00000558745 LARGE2Q8N3Y3 721 aa17.47■□□□□ 0.39
TSPAN3-205ENST00000558745 CLUAP1Q96AJ1 413 aa17.47■□□□□ 0.39
TSPAN3-205ENST00000558745 POLLQ9UGP5 575 aa17.47■□□□□ 0.39
TSPAN3-205ENST00000558745 COL4A5P29400 1685 aa17.46■□□□□ 0.39
TSPAN3-205ENST00000558745 GLTPD2A6NH11 291 aa17.46■□□□□ 0.38
TSPAN3-205ENST00000558745 RIMBP2O15034 1052 aa17.46■□□□□ 0.38
TSPAN3-205ENST00000558745 PPIP5K2O43314 1243 aa17.46■□□□□ 0.38
TSPAN3-205ENST00000558745 TMC4Q7Z404 712 aa17.46■□□□□ 0.38
TSPAN3-205ENST00000558745 ZNF594Q96JF6 807 aaPredicted RBP17.46■□□□□ 0.38
TSPAN3-205ENST00000558745 RTFDC1Q9BY42 306 aaPredicted RBP17.46■□□□□ 0.38
TSPAN3-205ENST00000558745 UTYO14607 1347 aa17.45■□□□□ 0.38
TSPAN3-205ENST00000558745 ZNF541Q9H0D2 1346 aa17.45■□□□□ 0.38
TSPAN3-205ENST00000558745 C6orf229H3BNL8 230 aa17.45■□□□□ 0.38
TSPAN3-205ENST00000558745 TRIM27P14373 513 aa17.45■□□□□ 0.38
TSPAN3-205ENST00000558745 GRIPAP1Q4V328 841 aa17.45■□□□□ 0.38
TSPAN3-205ENST00000558745 ARHGAP45Q92619 1136 aa17.45■□□□□ 0.38
TSPAN3-205ENST00000558745 CDC5LQ99459 802 aaKnown RBP17.45■□□□□ 0.38
TSPAN3-205ENST00000558745 MINPP1Q9UNW1 487 aa17.45■□□□□ 0.38
TSPAN3-205ENST00000558745 DICER1Q9UPY3 1922 aaKnown RBP17.44■□□□□ 0.38
TSPAN3-205ENST00000558745 MYH3P11055 1940 aa17.44■□□□□ 0.38
TSPAN3-205ENST00000558745 CCT4P50991 539 aaKnown RBP17.44■□□□□ 0.38
TSPAN3-205ENST00000558745 JMYQ8N9B5 988 aa17.44■□□□□ 0.38
TSPAN3-205ENST00000558745 TBC1D16Q8TBP0 767 aa17.44■□□□□ 0.38
TSPAN3-205ENST00000558745 JDP2Q8WYK2 163 aa17.44■□□□□ 0.38
TSPAN3-205ENST00000558745 KLRG1Q96E93 195 aa17.44■□□□□ 0.38
TSPAN3-205ENST00000558745 BICC1Q9H694 974 aaKnown RBP17.44■□□□□ 0.38
TSPAN3-205ENST00000558745 ANKIB1Q9P2G1 1089 aa17.44■□□□□ 0.38
TSPAN3-205ENST00000558745 KIF16BQ96L93 1317 aa17.44■□□□□ 0.38
TSPAN3-205ENST00000558745 TIAM2Q8IVF5 1701 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms