RNA–Protein interactions for RNA: ENST00000558126.1

LYSMD2-203, Transcript of LysM domain containing 2, humanhuman

TSL 5 BASIC

Gene LYSMD2, Length 775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-203ENST00000558126 IARSP41252 1262 aaKnown RBP13.85□□□□□ -0.19
LYSMD2-203ENST00000558126 DOK7Q18PE1 504 aa13.85□□□□□ -0.19
LYSMD2-203ENST00000558126 NBPF10Q6P3W6 841 aaKnown RBP13.85□□□□□ -0.19
LYSMD2-203ENST00000558126 NBPF15Q8N660 670 aa13.85□□□□□ -0.19
LYSMD2-203ENST00000558126 CCER1Q8TC90 406 aaPredicted RBP13.85□□□□□ -0.19
LYSMD2-203ENST00000558126 ZNF277Q9NRM2 450 aaPredicted RBP13.85□□□□□ -0.19
LYSMD2-203ENST00000558126 ZNF541Q9H0D2 1346 aa13.85□□□□□ -0.19
LYSMD2-203ENST00000558126 PRAMEF22A3QJZ6 481 aa13.84□□□□□ -0.19
LYSMD2-203ENST00000558126 ERVV-1B6SEH8 477 aa13.84□□□□□ -0.19
LYSMD2-203ENST00000558126 MAP2K1Q02750 393 aaPredicted RBP13.84□□□□□ -0.19
LYSMD2-203ENST00000558126 DEFB115Q30KQ5 88 aa13.84□□□□□ -0.19
LYSMD2-203ENST00000558126 CNTROBQ8N137 903 aa13.84□□□□□ -0.19
LYSMD2-203ENST00000558126 ZNF710Q8N1W2 664 aa13.84□□□□□ -0.19
LYSMD2-203ENST00000558126 SYNE4Q8N205 404 aa13.84□□□□□ -0.19
LYSMD2-203ENST00000558126 NYXQ9GZU5 481 aa13.84□□□□□ -0.19
LYSMD2-203ENST00000558126 ARFGEF2Q9Y6D5 1785 aa13.83□□□□□ -0.19
LYSMD2-203ENST00000558126 SNED1Q8TER0 1413 aa13.83□□□□□ -0.2
LYSMD2-203ENST00000558126 HOXB3P14651 431 aaPredicted RBP13.83□□□□□ -0.2
LYSMD2-203ENST00000558126 HOXA10P31260 410 aaPredicted RBP13.83□□□□□ -0.2
LYSMD2-203ENST00000558126 TAF7Q15545 349 aaPredicted RBP13.83□□□□□ -0.2
LYSMD2-203ENST00000558126 EAPPQ56P03 285 aaPredicted RBP13.83□□□□□ -0.2
LYSMD2-203ENST00000558126 TMEM92Q6UXU6 159 aa13.83□□□□□ -0.2
LYSMD2-203ENST00000558126 BCORQ6W2J9 1755 aa13.82□□□□□ -0.2
LYSMD2-203ENST00000558126 PIP4K2AP48426 406 aaPredicted RBP13.82□□□□□ -0.2
LYSMD2-203ENST00000558126 MCM10Q7L590 875 aa13.82□□□□□ -0.2
LYSMD2-203ENST00000558126 JDP2Q8WYK2 163 aa13.82□□□□□ -0.2
LYSMD2-203ENST00000558126 GTF2E1P29083 439 aaPredicted RBP13.81□□□□□ -0.2
LYSMD2-203ENST00000558126 HLFQ16534 295 aa13.81□□□□□ -0.2
LYSMD2-203ENST00000558126 PNISRQ8TF01 805 aaKnown RBP13.81□□□□□ -0.2
LYSMD2-203ENST00000558126 VPS33BQ9H267 617 aa13.81□□□□□ -0.2
LYSMD2-203ENST00000558126 WDR33Q9C0J8 1336 aaKnown RBP13.81□□□□□ -0.2
LYSMD2-203ENST00000558126 IBTKQ9P2D0 1353 aaPredicted RBP13.81□□□□□ -0.2
LYSMD2-203ENST00000558126 RIC1Q4ADV7 1423 aa13.81□□□□□ -0.2
LYSMD2-203ENST00000558126 RIMBP2O15034 1052 aa13.8□□□□□ -0.2
LYSMD2-203ENST00000558126 U2AF1L5P0DN76 240 aaPredicted RBP13.8□□□□□ -0.2
LYSMD2-203ENST00000558126 EIF6P56537 245 aaKnown RBP13.8□□□□□ -0.2
LYSMD2-203ENST00000558126 U2AF1Q01081 240 aaKnown RBP eCLIP13.8□□□□□ -0.2
LYSMD2-203ENST00000558126 MAP1SQ66K74 1059 aaPredicted RBP13.8□□□□□ -0.2
LYSMD2-203ENST00000558126 OLFM4Q6UX06 510 aa13.8□□□□□ -0.2
LYSMD2-203ENST00000558126 DDX21Q9NR30 783 aaKnown RBP eCLIP13.8□□□□□ -0.2
LYSMD2-203ENST00000558126 RNF123Q5XPI4 1314 aa13.8□□□□□ -0.2
LYSMD2-203ENST00000558126 ADAMTSL1Q8N6G6 1762 aa13.8□□□□□ -0.2
LYSMD2-203ENST00000558126 HSPA8P11142 646 aaKnown RBP13.79□□□□□ -0.2
LYSMD2-203ENST00000558126 HOXB1P14653 301 aaPredicted RBP13.79□□□□□ -0.2
LYSMD2-203ENST00000558126 LBX1P52954 281 aa13.79□□□□□ -0.2
LYSMD2-203ENST00000558126 USP50Q70EL3 339 aaPredicted RBP13.79□□□□□ -0.2
LYSMD2-203ENST00000558126 CRAMP1Q96RY5 1269 aa13.79□□□□□ -0.2
LYSMD2-203ENST00000558126 LMOD1P29536 600 aaPredicted RBP13.78□□□□□ -0.2
LYSMD2-203ENST00000558126 PPP2R1AP30153 589 aa13.78□□□□□ -0.2
LYSMD2-203ENST00000558126 ECE1P42892 770 aa13.78□□□□□ -0.2
LYSMD2-203ENST00000558126 KRTAP3-3Q9BYR6 98 aa13.78□□□□□ -0.2
LYSMD2-203ENST00000558126 KRTAP3-2Q9BYR7 98 aa13.78□□□□□ -0.2
LYSMD2-203ENST00000558126 MAP3K15Q6ZN16 1313 aa13.78□□□□□ -0.2
LYSMD2-203ENST00000558126 POTEB3A0JP26 581 aa13.77□□□□□ -0.21
LYSMD2-203ENST00000558126 SCNN1DP51172 638 aa13.77□□□□□ -0.21
LYSMD2-203ENST00000558126 DCTN1Q14203 1278 aa13.77□□□□□ -0.21
LYSMD2-203ENST00000558126 POTEBQ6S5H4 581 aa13.77□□□□□ -0.21
LYSMD2-203ENST00000558126 ABT1Q9ULW3 272 aaKnown RBP13.77□□□□□ -0.21
LYSMD2-203ENST00000558126 ABCC12Q96J65 1359 aa13.76□□□□□ -0.21
LYSMD2-203ENST00000558126 ERBB4Q15303 1308 aa13.76□□□□□ -0.21
LYSMD2-203ENST00000558126 FAM177BA6PVY3 158 aa13.76□□□□□ -0.21
LYSMD2-203ENST00000558126 KIF6Q6ZMV9 814 aa13.76□□□□□ -0.21
LYSMD2-203ENST00000558126 ZNF34Q8IZ26 560 aa13.76□□□□□ -0.21
LYSMD2-203ENST00000558126 RPGRQ92834 1020 aaKnown RBP13.76□□□□□ -0.21
LYSMD2-203ENST00000558126 ABHD8Q96I13 439 aa13.76□□□□□ -0.21
LYSMD2-203ENST00000558126 RBM17Q96I25 401 aaKnown RBP13.76□□□□□ -0.21
LYSMD2-203ENST00000558126 MAP2K2P36507 400 aa13.75□□□□□ -0.21
LYSMD2-203ENST00000558126 EIF4A1P60842 406 aaKnown RBP13.75□□□□□ -0.21
LYSMD2-203ENST00000558126 SLC10A5Q5PT55 438 aa13.75□□□□□ -0.21
LYSMD2-203ENST00000558126 NUTM1Q86Y26 1132 aa13.75□□□□□ -0.21
LYSMD2-203ENST00000558126 LARGE2Q8N3Y3 721 aa13.75□□□□□ -0.21
LYSMD2-203ENST00000558126 HHIPL1Q96JK4 782 aa13.75□□□□□ -0.21
LYSMD2-203ENST00000558126 EPS15P42566 896 aa13.74□□□□□ -0.21
LYSMD2-203ENST00000558126 RGS19P49795 217 aa13.74□□□□□ -0.21
LYSMD2-203ENST00000558126 PARP10Q53GL7 1025 aa13.74□□□□□ -0.21
LYSMD2-203ENST00000558126 CST9Q5W186 159 aa13.74□□□□□ -0.21
LYSMD2-203ENST00000558126 GIGYF2Q6Y7W6 1299 aaKnown RBP13.74□□□□□ -0.21
LYSMD2-203ENST00000558126 GJA3Q9Y6H8 435 aa13.74□□□□□ -0.21
LYSMD2-203ENST00000558126 TLL2Q9Y6L7 1015 aa13.74□□□□□ -0.21
LYSMD2-203ENST00000558126 UBN2Q6ZU65 1347 aa13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 PPEF1O14829 653 aaPredicted RBP13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 CA12O43570 354 aa13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 NEFMP07197 916 aa13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 SUSD4Q5VX71 490 aa13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 PPP1R42Q7Z4L9 355 aa13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 NIM1KQ8IY84 436 aa13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 CAPNS2Q96L46 248 aa13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 NLRP3Q96P20 1036 aa13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 GPR101Q96P66 508 aaPredicted RBP13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 BEGAINQ9BUH8 593 aa13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 RTFDC1Q9BY42 306 aaPredicted RBP13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 TMX4Q9H1E5 349 aaPredicted RBP13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 ADARB2Q9NS39 739 aaKnown RBP13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 MIS18AQ9NYP9 233 aa13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 PGAP2Q9UHJ9 254 aa13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 ATP6V0A2Q9Y487 856 aa13.73□□□□□ -0.21
LYSMD2-203ENST00000558126 CDHR2Q9BYE9 1310 aa13.72□□□□□ -0.21
LYSMD2-203ENST00000558126 NTSR2O95665 410 aa13.72□□□□□ -0.21
LYSMD2-203ENST00000558126 CNGB1Q14028 1251 aaPredicted RBP13.72□□□□□ -0.21
LYSMD2-203ENST00000558126 TTLL7Q6ZT98 887 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms