RNA–Protein interactions for RNA: ENST00000558016.1

IDH3A-204, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-204ENST00000558016 ERVV-2B6SEH9 535 aa8.41□□□□□ -1.06
IDH3A-204ENST00000558016 HLA-CQ95604 372 aa8.41□□□□□ -1.06
IDH3A-204ENST00000558016 GPCPD1Q9NPB8 672 aa8.41□□□□□ -1.06
IDH3A-204ENST00000558016 ITGB4P16144 1822 aa8.4□□□□□ -1.06
IDH3A-204ENST00000558016 KDRP35968 1356 aa8.4□□□□□ -1.06
IDH3A-204ENST00000558016 GDF9O60383 454 aa8.4□□□□□ -1.06
IDH3A-204ENST00000558016 PTCD1O75127 700 aaKnown RBP8.4□□□□□ -1.06
IDH3A-204ENST00000558016 NEFMP07197 916 aa8.4□□□□□ -1.06
IDH3A-204ENST00000558016 IL13P35225 146 aa8.4□□□□□ -1.06
IDH3A-204ENST00000558016 CLCN1P35523 988 aa8.4□□□□□ -1.06
IDH3A-204ENST00000558016 FOXC1Q12948 553 aa8.4□□□□□ -1.06
IDH3A-204ENST00000558016 PKDCCQ504Y2 493 aa8.4□□□□□ -1.06
IDH3A-204ENST00000558016 COL23A1Q86Y22 540 aaPredicted RBP8.4□□□□□ -1.06
IDH3A-204ENST00000558016 LINC00116Q8NCU8 138 aa8.4□□□□□ -1.06
IDH3A-204ENST00000558016 SYT17Q9BSW7 474 aa8.4□□□□□ -1.06
IDH3A-204ENST00000558016 NUDCQ9Y266 331 aa8.4□□□□□ -1.06
IDH3A-204ENST00000558016 NPC1L1Q9UHC9 1359 aa8.39□□□□□ -1.07
IDH3A-204ENST00000558016 SSFA2P28290 1259 aa8.39□□□□□ -1.07
IDH3A-204ENST00000558016 PRR20EP86478 221 aa8.39□□□□□ -1.07
IDH3A-204ENST00000558016 PRR20CP86479 221 aa8.39□□□□□ -1.07
IDH3A-204ENST00000558016 PRR20DP86480 221 aa8.39□□□□□ -1.07
IDH3A-204ENST00000558016 PRR20BP86481 221 aa8.39□□□□□ -1.07
IDH3A-204ENST00000558016 PRR20AP86496 221 aa8.39□□□□□ -1.07
IDH3A-204ENST00000558016 Q3C1V9 767 aa8.39□□□□□ -1.07
IDH3A-204ENST00000558016 AKAP4Q5JQC9 854 aa8.39□□□□□ -1.07
IDH3A-204ENST00000558016 TTC5Q8N0Z6 440 aa8.39□□□□□ -1.07
IDH3A-204ENST00000558016 ATG3Q9NT62 314 aa8.39□□□□□ -1.07
IDH3A-204ENST00000558016 RTCBQ9Y3I0 505 aaKnown RBP8.39□□□□□ -1.07
IDH3A-204ENST00000558016 TEFQ10587 303 aa8.38□□□□□ -1.07
IDH3A-204ENST00000558016 MSS51Q4VC12 460 aa8.38□□□□□ -1.07
IDH3A-204ENST00000558016 GAS2L2Q8NHY3 880 aa8.38□□□□□ -1.07
IDH3A-204ENST00000558016 FAM217BQ9NTX9 383 aaPredicted RBP8.38□□□□□ -1.07
IDH3A-204ENST00000558016 MAP3K5Q99683 1374 aa8.37□□□□□ -1.07
IDH3A-204ENST00000558016 FAM187AA6NFU0 413 aa8.37□□□□□ -1.07
IDH3A-204ENST00000558016 U2AF1L5P0DN76 240 aaPredicted RBP8.37□□□□□ -1.07
IDH3A-204ENST00000558016 RFC4P35249 363 aa8.37□□□□□ -1.07
IDH3A-204ENST00000558016 RPIAP49247 311 aa8.37□□□□□ -1.07
IDH3A-204ENST00000558016 USP46P62068 366 aa8.37□□□□□ -1.07
IDH3A-204ENST00000558016 U2AF1Q01081 240 aaKnown RBP eCLIP8.37□□□□□ -1.07
IDH3A-204ENST00000558016 GUCA2AQ02747 115 aa8.37□□□□□ -1.07
IDH3A-204ENST00000558016 ITPK1Q13572 414 aa8.37□□□□□ -1.07
IDH3A-204ENST00000558016 NPM2Q86SE8 214 aaKnown RBP8.37□□□□□ -1.07
IDH3A-204ENST00000558016 NFATC2IPQ8NCF5 419 aa8.37□□□□□ -1.07
IDH3A-204ENST00000558016 REPIN1Q9BWE0 567 aaKnown RBP8.37□□□□□ -1.07
IDH3A-204ENST00000558016 WWC3Q9ULE0 1092 aa8.37□□□□□ -1.07
IDH3A-204ENST00000558016 COL3A1P02461 1466 aaPredicted RBP8.37□□□□□ -1.07
IDH3A-204ENST00000558016 TAF1LQ8IZX4 1826 aa8.36□□□□□ -1.07
IDH3A-204ENST00000558016 PER1O15534 1290 aaPredicted RBP8.36□□□□□ -1.07
IDH3A-204ENST00000558016 ZBTB24O43167 697 aaPredicted RBP8.36□□□□□ -1.07
IDH3A-204ENST00000558016 HOXA2O43364 376 aa8.36□□□□□ -1.07
IDH3A-204ENST00000558016 CD2BP2O95400 341 aaKnown RBP8.36□□□□□ -1.07
IDH3A-204ENST00000558016 TRAPPC3LQ5T215 181 aa8.36□□□□□ -1.07
IDH3A-204ENST00000558016 SMIM5Q71RC9 77 aa8.36□□□□□ -1.07
IDH3A-204ENST00000558016 NLGN2Q8NFZ4 835 aa8.36□□□□□ -1.07
IDH3A-204ENST00000558016 RTF1Q92541 710 aaKnown RBP8.36□□□□□ -1.07
IDH3A-204ENST00000558016 USB1Q9BQ65 265 aaKnown RBP8.36□□□□□ -1.07
IDH3A-204ENST00000558016 SLC52A2Q9HAB3 445 aa8.36□□□□□ -1.07
IDH3A-204ENST00000558016 PKD2L1Q9P0L9 805 aa8.36□□□□□ -1.07
IDH3A-204ENST00000558016 ZNF330Q9Y3S2 320 aaPredicted RBP8.36□□□□□ -1.07
IDH3A-204ENST00000558016 CNTNAP4Q9C0A0 1308 aa8.35□□□□□ -1.07
IDH3A-204ENST00000558016 MRC1P22897 1456 aa8.35□□□□□ -1.07
IDH3A-204ENST00000558016 DGAT1O75907 488 aa8.35□□□□□ -1.07
IDH3A-204ENST00000558016 PRKAR2BP31323 418 aa8.35□□□□□ -1.07
IDH3A-204ENST00000558016 MTHFSDQ2M296 383 aaKnown RBP8.35□□□□□ -1.07
IDH3A-204ENST00000558016 ZNF787Q6DD87 383 aa8.35□□□□□ -1.07
IDH3A-204ENST00000558016 NUTM1Q86Y26 1132 aa8.35□□□□□ -1.07
IDH3A-204ENST00000558016 ZC3H15Q8WU90 426 aaKnown RBP8.35□□□□□ -1.07
IDH3A-204ENST00000558016 PARP3Q9Y6F1 533 aa8.35□□□□□ -1.07
IDH3A-204ENST00000558016 UBR3Q6ZT12 1888 aa8.34□□□□□ -1.07
IDH3A-204ENST00000558016 MAPK8IP3Q9UPT6 1336 aa8.34□□□□□ -1.07
IDH3A-204ENST00000558016 CICQ96RK0 1608 aaPredicted RBP8.34□□□□□ -1.07
IDH3A-204ENST00000558016 GNAT3A8MTJ3 354 aa8.34□□□□□ -1.07
IDH3A-204ENST00000558016 NPHP1O15259 732 aa8.34□□□□□ -1.07
IDH3A-204ENST00000558016 RNMTO43148 476 aaKnown RBP8.34□□□□□ -1.07
IDH3A-204ENST00000558016 ZMYND10O75800 440 aa8.34□□□□□ -1.07
IDH3A-204ENST00000558016 MMP10P09238 476 aa8.34□□□□□ -1.07
IDH3A-204ENST00000558016 PPP2R1AP30153 589 aa8.34□□□□□ -1.07
IDH3A-204ENST00000558016 CRKLP46109 303 aaKnown RBP8.34□□□□□ -1.07
IDH3A-204ENST00000558016 SLC39A6Q13433 755 aa8.34□□□□□ -1.07
IDH3A-204ENST00000558016 SYMPKQ92797 1274 aaKnown RBP8.34□□□□□ -1.07
IDH3A-204ENST00000558016 SCN11AQ9UI33 1791 aa8.33□□□□□ -1.08
IDH3A-204ENST00000558016 SSTR3P32745 418 aaPredicted RBP8.33□□□□□ -1.08
IDH3A-204ENST00000558016 MMP16P51512 607 aa8.33□□□□□ -1.08
IDH3A-204ENST00000558016 TTLL12Q14166 644 aaPredicted RBP8.33□□□□□ -1.08
IDH3A-204ENST00000558016 AMIGO3Q86WK7 504 aa8.33□□□□□ -1.08
IDH3A-204ENST00000558016 DNAJC10Q8IXB1 793 aa8.33□□□□□ -1.08
IDH3A-204ENST00000558016 LGR6Q9HBX8 967 aa8.33□□□□□ -1.08
IDH3A-204ENST00000558016 CCDC87Q9NVE4 849 aa8.33□□□□□ -1.08
IDH3A-204ENST00000558016 CD2APQ9Y5K6 639 aa8.33□□□□□ -1.08
IDH3A-204ENST00000558016 COL5A3P25940 1745 aaPredicted RBP8.32□□□□□ -1.08
IDH3A-204ENST00000558016 GRIN3BO60391 1043 aa8.32□□□□□ -1.08
IDH3A-204ENST00000558016 RPS6KA4O75676 772 aa8.32□□□□□ -1.08
IDH3A-204ENST00000558016 STARD3NLO95772 234 aa8.32□□□□□ -1.08
IDH3A-204ENST00000558016 RC3H1Q5TC82 1133 aaKnown RBP8.32□□□□□ -1.08
IDH3A-204ENST00000558016 NLGN1Q8N2Q7 840 aa8.32□□□□□ -1.08
IDH3A-204ENST00000558016 CCDC24Q8N4L8 307 aa8.32□□□□□ -1.08
IDH3A-204ENST00000558016 COL15A1P39059 1388 aa8.32□□□□□ -1.08
IDH3A-204ENST00000558016 TJP1Q07157 1748 aa8.32□□□□□ -1.08
IDH3A-204ENST00000558016 ZNF831Q5JPB2 1677 aa8.31□□□□□ -1.08
IDH3A-204ENST00000558016 DXOO77932 396 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms