RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 TIMMDC1Q9NPL8 285 aa8.3□□□□□ -1.08
HNRNPC-233ENST00000557768 CUEDC1Q9NWM3 386 aaPredicted RBP8.3□□□□□ -1.08
HNRNPC-233ENST00000557768 MSH6P52701 1360 aa8.3□□□□□ -1.08
HNRNPC-233ENST00000557768 ADGRL2O95490 1459 aa8.3□□□□□ -1.08
HNRNPC-233ENST00000557768 UNC13BO14795 1591 aa8.3□□□□□ -1.08
HNRNPC-233ENST00000557768 ZFYVE9O95405 1425 aa8.29□□□□□ -1.08
HNRNPC-233ENST00000557768 TMEM229AB2RXF0 380 aa8.29□□□□□ -1.08
HNRNPC-233ENST00000557768 FAM50AQ14320 339 aaKnown RBP8.29□□□□□ -1.08
HNRNPC-233ENST00000557768 CFAP70Q5T0N1 1121 aa8.29□□□□□ -1.08
HNRNPC-233ENST00000557768 SLAIN2Q9P270 581 aa8.29□□□□□ -1.08
HNRNPC-233ENST00000557768 KIAA1024Q9UPX6 916 aa8.29□□□□□ -1.08
HNRNPC-233ENST00000557768 RPRD2Q5VT52 1461 aaKnown RBP8.29□□□□□ -1.08
HNRNPC-233ENST00000557768 RIMS2Q9UQ26 1411 aa8.29□□□□□ -1.08
HNRNPC-233ENST00000557768 SHPRHQ149N8 1683 aa8.28□□□□□ -1.08
HNRNPC-233ENST00000557768 PLEKHG1Q9ULL1 1385 aa8.28□□□□□ -1.08
HNRNPC-233ENST00000557768 PDE4CQ08493 712 aa8.28□□□□□ -1.08
HNRNPC-233ENST00000557768 SV2AQ7L0J3 742 aa8.28□□□□□ -1.08
HNRNPC-233ENST00000557768 TRIM50Q86XT4 487 aa8.28□□□□□ -1.08
HNRNPC-233ENST00000557768 SLC52A1Q9NWF4 448 aa8.28□□□□□ -1.08
HNRNPC-233ENST00000557768 MKRN1Q9UHC7 482 aaKnown RBP8.28□□□□□ -1.08
HNRNPC-233ENST00000557768 DYRK1BQ9Y463 629 aa8.28□□□□□ -1.08
HNRNPC-233ENST00000557768 ANKRD50Q9ULJ7 1429 aa8.28□□□□□ -1.08
HNRNPC-233ENST00000557768 JCADQ9P266 1359 aa8.27□□□□□ -1.09
HNRNPC-233ENST00000557768 SMTNP53814 917 aa8.27□□□□□ -1.09
HNRNPC-233ENST00000557768 CLDN10P78369 228 aa8.27□□□□□ -1.09
HNRNPC-233ENST00000557768 C4orf17Q53FE4 359 aa8.27□□□□□ -1.09
HNRNPC-233ENST00000557768 WDR44Q5JSH3 913 aa8.27□□□□□ -1.09
HNRNPC-233ENST00000557768 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.27□□□□□ -1.09
HNRNPC-233ENST00000557768 NANOS1Q8WY41 292 aaKnown RBP8.27□□□□□ -1.09
HNRNPC-233ENST00000557768 GZF1Q9H116 711 aaPredicted RBP8.27□□□□□ -1.09
HNRNPC-233ENST00000557768 GPAMQ9HCL2 828 aa8.27□□□□□ -1.09
HNRNPC-233ENST00000557768 IQGAP3Q86VI3 1631 aa8.27□□□□□ -1.09
HNRNPC-233ENST00000557768 LRP6O75581 1613 aa8.26□□□□□ -1.09
HNRNPC-233ENST00000557768 LMOD1P29536 600 aaPredicted RBP8.26□□□□□ -1.09
HNRNPC-233ENST00000557768 INSM1Q01101 510 aaPredicted RBP8.26□□□□□ -1.09
HNRNPC-233ENST00000557768 PPARGC1BQ86YN6 1023 aaKnown RBP8.26□□□□□ -1.09
HNRNPC-233ENST00000557768 RHBDD1Q8TEB9 315 aa8.26□□□□□ -1.09
HNRNPC-233ENST00000557768 DIP2AQ14689 1571 aa8.26□□□□□ -1.09
HNRNPC-233ENST00000557768 ATP1A2P50993 1020 aa8.25□□□□□ -1.09
HNRNPC-233ENST00000557768 TMCO4Q5TGY1 634 aa8.25□□□□□ -1.09
HNRNPC-233ENST00000557768 OGFOD1Q8N543 542 aa8.25□□□□□ -1.09
HNRNPC-233ENST00000557768 TPCN2Q8NHX9 752 aa8.25□□□□□ -1.09
HNRNPC-233ENST00000557768 ZNF594Q96JF6 807 aaPredicted RBP8.25□□□□□ -1.09
HNRNPC-233ENST00000557768 CNTNAP3BQ96NU0 1288 aa8.25□□□□□ -1.09
HNRNPC-233ENST00000557768 COL25A1Q9BXS0 654 aaPredicted RBP8.25□□□□□ -1.09
HNRNPC-233ENST00000557768 CNTNAP3Q9BZ76 1288 aa8.25□□□□□ -1.09
HNRNPC-233ENST00000557768 DNAAF2Q9NVR5 837 aaKnown RBP8.25□□□□□ -1.09
HNRNPC-233ENST00000557768 ZNF358Q9NW07 568 aa8.25□□□□□ -1.09
HNRNPC-233ENST00000557768 SPHKAPQ2M3C7 1700 aa8.25□□□□□ -1.09
HNRNPC-233ENST00000557768 AHDC1Q5TGY3 1603 aaPredicted RBP8.25□□□□□ -1.09
HNRNPC-233ENST00000557768 NRXN3Q9Y4C0 1643 aa8.25□□□□□ -1.09
HNRNPC-233ENST00000557768 ADAMTS13Q76LX8 1427 aa8.24□□□□□ -1.09
HNRNPC-233ENST00000557768 A6NJY4 79 aa8.24□□□□□ -1.09
HNRNPC-233ENST00000557768 BACH1O14867 736 aa8.24□□□□□ -1.09
HNRNPC-233ENST00000557768 ZBTB7BO15156 539 aaPredicted RBP8.24□□□□□ -1.09
HNRNPC-233ENST00000557768 F11P03951 625 aa8.24□□□□□ -1.09
HNRNPC-233ENST00000557768 PLA2G4AP47712 749 aa8.24□□□□□ -1.09
HNRNPC-233ENST00000557768 DBN1Q16643 649 aa8.24□□□□□ -1.09
HNRNPC-233ENST00000557768 CCDC102BQ68D86 513 aa8.24□□□□□ -1.09
HNRNPC-233ENST00000557768 TRIM22Q8IYM9 498 aa8.24□□□□□ -1.09
HNRNPC-233ENST00000557768 SLC4A9Q96Q91 983 aa8.24□□□□□ -1.09
HNRNPC-233ENST00000557768 TBX22Q9Y458 520 aa8.24□□□□□ -1.09
HNRNPC-233ENST00000557768 TRPM2O94759 1503 aa8.24□□□□□ -1.09
HNRNPC-233ENST00000557768 XRN1Q8IZH2 1706 aaKnown RBP8.23□□□□□ -1.09
HNRNPC-233ENST00000557768 NHSL1Q5SYE7 1610 aa8.23□□□□□ -1.09
HNRNPC-233ENST00000557768 A0A1B0GTH6 734 aa8.23□□□□□ -1.09
HNRNPC-233ENST00000557768 RFX1P22670 979 aa8.23□□□□□ -1.09
HNRNPC-233ENST00000557768 MEX3CQ5U5Q3 659 aaKnown RBP8.23□□□□□ -1.09
HNRNPC-233ENST00000557768 AIDAQ96BJ3 306 aa8.23□□□□□ -1.09
HNRNPC-233ENST00000557768 ZNF837Q96EG3 531 aaPredicted RBP8.23□□□□□ -1.09
HNRNPC-233ENST00000557768 NIFKQ9BYG3 293 aaKnown RBP8.23□□□□□ -1.09
HNRNPC-233ENST00000557768 NCOA3Q9Y6Q9 1424 aa8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 H7C1W4 665 aa8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 GPR25O00155 361 aa8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 DKK1O94907 266 aa8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 ATF3P18847 181 aa8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 RASA1P20936 1047 aa8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 KRT76Q01546 638 aa8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 CRTC2Q53ET0 693 aaPredicted RBP8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 RNFT1Q5M7Z0 435 aa8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 TNS4Q8IZW8 715 aa8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 GTPBP3Q969Y2 492 aaKnown RBP8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 C19orf44Q9H6X5 657 aa8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 CABP1Q9NZU7 370 aa8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 USP3Q9Y6I4 520 aa8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 NALCNQ8IZF0 1738 aa8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 SPATA31A6Q5VVP1 1343 aa8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 KIF1BO60333 1816 aa8.22□□□□□ -1.09
HNRNPC-233ENST00000557768 PTPRUQ92729 1446 aa8.21□□□□□ -1.09
HNRNPC-233ENST00000557768 CDK2AP1O14519 115 aa8.21□□□□□ -1.1
HNRNPC-233ENST00000557768 MSX1P28360 303 aa8.21□□□□□ -1.1
HNRNPC-233ENST00000557768 MTFR1Q15390 333 aa8.21□□□□□ -1.1
HNRNPC-233ENST00000557768 TBCELQ5QJ74 424 aa8.21□□□□□ -1.1
HNRNPC-233ENST00000557768 LARGE2Q8N3Y3 721 aa8.21□□□□□ -1.1
HNRNPC-233ENST00000557768 PBXIP1Q96AQ6 731 aa8.21□□□□□ -1.1
HNRNPC-233ENST00000557768 NUCKS1Q9H1E3 243 aaKnown RBP8.21□□□□□ -1.1
HNRNPC-233ENST00000557768 RUBCNLQ9H714 662 aa8.21□□□□□ -1.1
HNRNPC-233ENST00000557768 RBM19Q9Y4C8 960 aaKnown RBP8.21□□□□□ -1.1
HNRNPC-233ENST00000557768 ASXL1Q8IXJ9 1541 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms