RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, human

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-227	ENST00000557554	SP8	Q8IXZ3	490 aa		13.54	□□□□□ -0.24
ABCD4-227	ENST00000557554	GAS2L2	Q8NHY3	880 aa		13.54	□□□□□ -0.24
ABCD4-227	ENST00000557554	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.54	□□□□□ -0.24
ABCD4-227	ENST00000557554	HTT	P42858	3142 aa		13.53	□□□□□ -0.24
ABCD4-227	ENST00000557554	POTEF	A5A3E0	1075 aa		13.53	□□□□□ -0.24
ABCD4-227	ENST00000557554	DLL1	O00548	723 aa		13.53	□□□□□ -0.24
ABCD4-227	ENST00000557554	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCD4-227	ENST00000557554	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCD4-227	ENST00000557554	SLC10A5	Q5PT55	438 aa		13.53	□□□□□ -0.24
ABCD4-227	ENST00000557554	ZNF34	Q8IZ26	560 aa		13.53	□□□□□ -0.24
ABCD4-227	ENST00000557554	DCPS	Q96C86	337 aa	Known RBP	13.53	□□□□□ -0.24
ABCD4-227	ENST00000557554	CENPF	P49454	3210 aa		13.52	□□□□□ -0.24
ABCD4-227	ENST00000557554	GPR25	O00155	361 aa		13.52	□□□□□ -0.25
ABCD4-227	ENST00000557554	BBOX1	O75936	387 aa		13.52	□□□□□ -0.25
ABCD4-227	ENST00000557554	TM4SF4	P48230	202 aa		13.52	□□□□□ -0.25
ABCD4-227	ENST00000557554	MPND	Q8N594	471 aa		13.52	□□□□□ -0.25
ABCD4-227	ENST00000557554	PHACTR3	Q96KR7	559 aa		13.52	□□□□□ -0.25
ABCD4-227	ENST00000557554	COLQ	Q9Y215	455 aa	Predicted RBP	13.52	□□□□□ -0.25
ABCD4-227	ENST00000557554	KIAA0100	Q14667	2235 aa	Known RBP	13.51	□□□□□ -0.25
ABCD4-227	ENST00000557554	MAP3K15	Q6ZN16	1313 aa		13.51	□□□□□ -0.25
ABCD4-227	ENST00000557554	NTSR2	O95665	410 aa		13.51	□□□□□ -0.25
ABCD4-227	ENST00000557554	DPP8	Q6V1X1	898 aa	Predicted RBP	13.51	□□□□□ -0.25
ABCD4-227	ENST00000557554	BRCA2	P51587	3418 aa		13.51	□□□□□ -0.25
ABCD4-227	ENST00000557554		A0A0C4DFX4	3053 aa		13.51	□□□□□ -0.25
ABCD4-227	ENST00000557554	ABCC4	O15439	1325 aa		13.5	□□□□□ -0.25
ABCD4-227	ENST00000557554	PSMD14	O00487	310 aa		13.5	□□□□□ -0.25
ABCD4-227	ENST00000557554	GPT	P24298	496 aa		13.5	□□□□□ -0.25
ABCD4-227	ENST00000557554	NLRP3	Q96P20	1036 aa		13.5	□□□□□ -0.25
ABCD4-227	ENST00000557554	CFHR5	Q9BXR6	569 aa		13.5	□□□□□ -0.25
ABCD4-227	ENST00000557554	TMX4	Q9H1E5	349 aa	Predicted RBP	13.5	□□□□□ -0.25
ABCD4-227	ENST00000557554	R3HDML	Q9H3Y0	253 aa		13.5	□□□□□ -0.25
ABCD4-227	ENST00000557554	KNSTRN	Q9Y448	316 aa		13.5	□□□□□ -0.25
ABCD4-227	ENST00000557554	ASTN2	O75129	1339 aa	Predicted RBP	13.49	□□□□□ -0.25
ABCD4-227	ENST00000557554	RBM26	Q5T8P6	1007 aa	Known RBP	13.49	□□□□□ -0.25
ABCD4-227	ENST00000557554	TTLL7	Q6ZT98	887 aa		13.49	□□□□□ -0.25
ABCD4-227	ENST00000557554	CDCA5	Q96FF9	252 aa		13.49	□□□□□ -0.25
ABCD4-227	ENST00000557554	KCNQ5	Q9NR82	932 aa		13.49	□□□□□ -0.25
ABCD4-227	ENST00000557554	TRIOBP	Q9H2D6	2365 aa		13.49	□□□□□ -0.25
ABCD4-227	ENST00000557554	FKBP1B	P68106	108 aa		13.48	□□□□□ -0.25
ABCD4-227	ENST00000557554	INTS3	Q68E01	1043 aa	Known RBP	13.48	□□□□□ -0.25
ABCD4-227	ENST00000557554	NGEF	Q8N5V2	710 aa		13.48	□□□□□ -0.25
ABCD4-227	ENST00000557554	DUOX1	Q9NRD9	1551 aa		13.48	□□□□□ -0.25
ABCD4-227	ENST00000557554	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.48	□□□□□ -0.25
ABCD4-227	ENST00000557554	FKTN	O75072	461 aa		13.47	□□□□□ -0.25
ABCD4-227	ENST00000557554	RPS12	P25398	132 aa	Known RBP	13.47	□□□□□ -0.25
ABCD4-227	ENST00000557554	SULF1	Q8IWU6	871 aa		13.47	□□□□□ -0.25
ABCD4-227	ENST00000557554	OTUD5	Q96G74	571 aa		13.47	□□□□□ -0.25
ABCD4-227	ENST00000557554	PAPPA2	Q9BXP8	1791 aa		13.47	□□□□□ -0.25
ABCD4-227	ENST00000557554	CEP290	O15078	2479 aa		13.46	□□□□□ -0.25
ABCD4-227	ENST00000557554	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.46	□□□□□ -0.25
ABCD4-227	ENST00000557554	MOB2	Q70IA6	237 aa		13.46	□□□□□ -0.25
ABCD4-227	ENST00000557554	GGA3	Q9NZ52	723 aa		13.46	□□□□□ -0.25
ABCD4-227	ENST00000557554	COL3A1	P02461	1466 aa	Predicted RBP	13.46	□□□□□ -0.25
ABCD4-227	ENST00000557554	TAF1	P21675	1872 aa		13.46	□□□□□ -0.26
ABCD4-227	ENST00000557554	RTL9	Q8NET4	1388 aa		13.45	□□□□□ -0.26
ABCD4-227	ENST00000557554	EN2	P19622	333 aa	Predicted RBP	13.45	□□□□□ -0.26
ABCD4-227	ENST00000557554	KIF4B	Q2VIQ3	1234 aa		13.45	□□□□□ -0.26
ABCD4-227	ENST00000557554	MCM10	Q7L590	875 aa		13.45	□□□□□ -0.26
ABCD4-227	ENST00000557554	PPP1R42	Q7Z4L9	355 aa		13.45	□□□□□ -0.26
ABCD4-227	ENST00000557554	ZBTB3	Q9H5J0	574 aa		13.45	□□□□□ -0.26
ABCD4-227	ENST00000557554	ANKRD36C	Q5JPF3	1778 aa		13.45	□□□□□ -0.26
ABCD4-227	ENST00000557554	COL6A3	P12111	3177 aa		13.44	□□□□□ -0.26
ABCD4-227	ENST00000557554	UBE2Q2L	H0YL09	131 aa		13.44	□□□□□ -0.26
ABCD4-227	ENST00000557554	VIL1	P09327	827 aa	Known RBP	13.44	□□□□□ -0.26
ABCD4-227	ENST00000557554	WASHC4	Q2M389	1173 aa		13.44	□□□□□ -0.26
ABCD4-227	ENST00000557554	SLC17A8	Q8NDX2	589 aa		13.44	□□□□□ -0.26
ABCD4-227	ENST00000557554	DBNDD1	Q9H9R9	158 aa		13.44	□□□□□ -0.26
ABCD4-227	ENST00000557554	LAMB2	P55268	1798 aa		13.44	□□□□□ -0.26
ABCD4-227	ENST00000557554	CUL9	Q8IWT3	2517 aa		13.43	□□□□□ -0.26
ABCD4-227	ENST00000557554	U2SURP	O15042	1029 aa	Known RBP	13.43	□□□□□ -0.26
ABCD4-227	ENST00000557554	PER1	O15534	1290 aa	Predicted RBP	13.43	□□□□□ -0.26
ABCD4-227	ENST00000557554	PARP10	Q53GL7	1025 aa		13.43	□□□□□ -0.26
ABCD4-227	ENST00000557554	ANGEL2	Q5VTE6	544 aa	Known RBP	13.43	□□□□□ -0.26
ABCD4-227	ENST00000557554	OTOP1	Q7RTM1	612 aa		13.43	□□□□□ -0.26
ABCD4-227	ENST00000557554	MIS18A	Q9NYP9	233 aa		13.43	□□□□□ -0.26
ABCD4-227	ENST00000557554	RRP7A	Q9Y3A4	280 aa	Known RBP	13.43	□□□□□ -0.26
ABCD4-227	ENST00000557554	RANBP2	P49792	3224 aa	Known RBP	13.43	□□□□□ -0.26
ABCD4-227	ENST00000557554	SCN9A	Q15858	1988 aa		13.42	□□□□□ -0.26
ABCD4-227	ENST00000557554	ZNF280A	P59817	542 aa	Predicted RBP	13.42	□□□□□ -0.26
ABCD4-227	ENST00000557554	GRAP	Q13588	217 aa		13.42	□□□□□ -0.26
ABCD4-227	ENST00000557554	SCARF1	Q14162	830 aa		13.42	□□□□□ -0.26
ABCD4-227	ENST00000557554	DCTN1	Q14203	1278 aa		13.42	□□□□□ -0.26
ABCD4-227	ENST00000557554	TAF7	Q15545	349 aa	Predicted RBP	13.42	□□□□□ -0.26
ABCD4-227	ENST00000557554	KIF6	Q6ZMV9	814 aa		13.42	□□□□□ -0.26
ABCD4-227	ENST00000557554	GRAPL	Q8TC17	118 aa	Predicted RBP	13.42	□□□□□ -0.26
ABCD4-227	ENST00000557554	UTP14A	Q9BVJ6	771 aa	Known RBP	13.42	□□□□□ -0.26
ABCD4-227	ENST00000557554	RSPH6A	Q9H0K4	717 aa		13.42	□□□□□ -0.26
ABCD4-227	ENST00000557554	POLL	Q9UGP5	575 aa		13.42	□□□□□ -0.26
ABCD4-227	ENST00000557554	LRRC37A	A6NMS7	1700 aa		13.42	□□□□□ -0.26
ABCD4-227	ENST00000557554	LAMB4	A4D0S4	1761 aa		13.41	□□□□□ -0.26
ABCD4-227	ENST00000557554	PRKAR2B	P31323	418 aa		13.41	□□□□□ -0.26
ABCD4-227	ENST00000557554	LRP10	Q7Z4F1	713 aa		13.41	□□□□□ -0.26
ABCD4-227	ENST00000557554	ARMC5	Q96C12	935 aa		13.41	□□□□□ -0.26
ABCD4-227	ENST00000557554	RIMBP2	O15034	1052 aa		13.4	□□□□□ -0.26
ABCD4-227	ENST00000557554	ECE2	O60344	883 aa		13.4	□□□□□ -0.26
ABCD4-227	ENST00000557554	HSPA5	P11021	654 aa	Known RBP	13.4	□□□□□ -0.26
ABCD4-227	ENST00000557554	HCLS1	P14317	486 aa	Predicted RBP	13.4	□□□□□ -0.26
ABCD4-227	ENST00000557554	MYL6B	P14649	208 aa		13.4	□□□□□ -0.26
ABCD4-227	ENST00000557554	DDX46	Q7L014	1031 aa	Known RBP	13.4	□□□□□ -0.26
ABCD4-227	ENST00000557554	TMC4	Q7Z404	712 aa		13.4	□□□□□ -0.26

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