RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 EXOC6Q8TAG9 804 aa20.64■□□□□ 0.89
PCNX4-213ENST00000556907 CLUAP1Q96AJ1 413 aa20.64■□□□□ 0.89
PCNX4-213ENST00000556907 CRAMP1Q96RY5 1269 aa20.64■□□□□ 0.89
PCNX4-213ENST00000556907 DDX60Q8IY21 1712 aaKnown RBP20.64■□□□□ 0.89
PCNX4-213ENST00000556907 CCDC152Q4G0S7 254 aa20.63■□□□□ 0.89
PCNX4-213ENST00000556907 TNRC6CQ9HCJ0 1690 aaKnown RBP20.63■□□□□ 0.89
PCNX4-213ENST00000556907 GRIN3BO60391 1043 aa20.62■□□□□ 0.89
PCNX4-213ENST00000556907 DDX46Q7L014 1031 aaKnown RBP20.62■□□□□ 0.89
PCNX4-213ENST00000556907 TMEM57Q8N5G2 664 aa20.62■□□□□ 0.89
PCNX4-213ENST00000556907 USP44Q9H0E7 712 aa20.62■□□□□ 0.89
PCNX4-213ENST00000556907 COG6Q9Y2V7 657 aa20.62■□□□□ 0.89
PCNX4-213ENST00000556907 COL11A2P13942 1736 aaPredicted RBP20.61■□□□□ 0.89
PCNX4-213ENST00000556907 GPR162Q16538 588 aa20.61■□□□□ 0.89
PCNX4-213ENST00000556907 MYH3P11055 1940 aa20.61■□□□□ 0.89
PCNX4-213ENST00000556907 BBOX1O75936 387 aa20.6■□□□□ 0.89
PCNX4-213ENST00000556907 CTSWP56202 376 aa20.6■□□□□ 0.89
PCNX4-213ENST00000556907 AAMPQ13685 434 aa20.6■□□□□ 0.89
PCNX4-213ENST00000556907 SOGA3Q5TF21 947 aa20.6■□□□□ 0.89
PCNX4-213ENST00000556907 C3orf67Q6ZVT6 689 aa20.6■□□□□ 0.89
PCNX4-213ENST00000556907 TMC4Q7Z404 712 aa20.6■□□□□ 0.89
PCNX4-213ENST00000556907 JARID2Q92833 1246 aaPredicted RBP20.6■□□□□ 0.89
PCNX4-213ENST00000556907 DDX19BQ9UMR2 479 aa20.6■□□□□ 0.89
PCNX4-213ENST00000556907 BCS1LQ9Y276 419 aa20.6■□□□□ 0.89
PCNX4-213ENST00000556907 RTL9Q8NET4 1388 aa20.59■□□□□ 0.89
PCNX4-213ENST00000556907 CSF1RP07333 972 aa20.59■□□□□ 0.89
PCNX4-213ENST00000556907 GNAI3P08754 354 aa20.59■□□□□ 0.89
PCNX4-213ENST00000556907 TTLL11Q8NHH1 800 aa20.59■□□□□ 0.89
PCNX4-213ENST00000556907 ARFGEF1Q9Y6D6 1849 aa20.59■□□□□ 0.89
PCNX4-213ENST00000556907 NBPF7P0C2Y1 421 aaPredicted RBP20.58■□□□□ 0.89
PCNX4-213ENST00000556907 GRAPQ13588 217 aa20.58■□□□□ 0.89
PCNX4-213ENST00000556907 GRIPAP1Q4V328 841 aa20.58■□□□□ 0.89
PCNX4-213ENST00000556907 CC2D2BQ6DHV5 1058 aa20.58■□□□□ 0.89
PCNX4-213ENST00000556907 PRPF40BQ6NWY9 871 aaKnown RBP20.58■□□□□ 0.89
PCNX4-213ENST00000556907 ITPRIPQ8IWB1 547 aa20.58■□□□□ 0.89
PCNX4-213ENST00000556907 GRAPLQ8TC17 118 aaPredicted RBP20.58■□□□□ 0.89
PCNX4-213ENST00000556907 CHMP4BQ9H444 224 aaKnown RBP20.58■□□□□ 0.89
PCNX4-213ENST00000556907 PPP4R2Q9NY27 417 aa20.58■□□□□ 0.89
PCNX4-213ENST00000556907 UBTFL1P0CB47 393 aaPredicted RBP20.57■□□□□ 0.88
PCNX4-213ENST00000556907 PELP1Q8IZL8 1130 aaKnown RBP20.57■□□□□ 0.88
PCNX4-213ENST00000556907 TMX4Q9H1E5 349 aaPredicted RBP20.57■□□□□ 0.88
PCNX4-213ENST00000556907 FOXO4P98177 505 aa20.56■□□□□ 0.88
PCNX4-213ENST00000556907 CDC5LQ99459 802 aaKnown RBP20.56■□□□□ 0.88
PCNX4-213ENST00000556907 YBX3P16989 372 aaKnown RBP eCLIP20.55■□□□□ 0.88
PCNX4-213ENST00000556907 SUCLG2Q96I99 432 aa20.55■□□□□ 0.88
PCNX4-213ENST00000556907 RPS8P62241 208 aaKnown RBP20.54■□□□□ 0.88
PCNX4-213ENST00000556907 RABL6Q3YEC7 729 aaPredicted RBP20.54■□□□□ 0.88
PCNX4-213ENST00000556907 C7orf43Q8WVR3 580 aa20.54■□□□□ 0.88
PCNX4-213ENST00000556907 SLX4Q8IY92 1834 aa20.53■□□□□ 0.88
PCNX4-213ENST00000556907 PPEF1O14829 653 aaPredicted RBP20.53■□□□□ 0.88
PCNX4-213ENST00000556907 LMBR1LQ6UX01 489 aa20.53■□□□□ 0.88
PCNX4-213ENST00000556907 ANKRD18BA2A2Z9 1011 aa20.52■□□□□ 0.88
PCNX4-213ENST00000556907 IFIT5Q13325 482 aaKnown RBP20.52■□□□□ 0.88
PCNX4-213ENST00000556907 CCDC57Q2TAC2 916 aa20.52■□□□□ 0.88
PCNX4-213ENST00000556907 CCDC93Q567U6 631 aa20.52■□□□□ 0.88
PCNX4-213ENST00000556907 ANKRD18AQ8IVF6 992 aa20.52■□□□□ 0.88
PCNX4-213ENST00000556907 SP8Q8IXZ3 490 aa20.52■□□□□ 0.88
PCNX4-213ENST00000556907 RTKN2Q8IZC4 609 aa20.52■□□□□ 0.88
PCNX4-213ENST00000556907 KAZALD1Q96I82 304 aa20.52■□□□□ 0.88
PCNX4-213ENST00000556907 MEIS3Q99687 375 aa20.52■□□□□ 0.88
PCNX4-213ENST00000556907 GREM2Q9H772 168 aa20.52■□□□□ 0.88
PCNX4-213ENST00000556907 WWC3Q9ULE0 1092 aa20.52■□□□□ 0.88
PCNX4-213ENST00000556907 ATP6V0A2Q9Y487 856 aa20.52■□□□□ 0.88
PCNX4-213ENST00000556907 ZBTB7BO15156 539 aaPredicted RBP20.51■□□□□ 0.87
PCNX4-213ENST00000556907 C21orf2O43822 256 aa20.51■□□□□ 0.87
PCNX4-213ENST00000556907 GNAI2P04899 355 aa20.51■□□□□ 0.87
PCNX4-213ENST00000556907 ITGA6P23229 1130 aa20.51■□□□□ 0.87
PCNX4-213ENST00000556907 EPHA10Q5JZY3 1008 aa20.51■□□□□ 0.87
PCNX4-213ENST00000556907 BICC1Q9H694 974 aaKnown RBP20.51■□□□□ 0.87
PCNX4-213ENST00000556907 CACNA1SQ13698 1873 aa20.51■□□□□ 0.87
PCNX4-213ENST00000556907 IGHMBP2P38935 993 aaKnown RBP20.5■□□□□ 0.87
PCNX4-213ENST00000556907 CELF1Q92879 486 aaKnown RBP20.5■□□□□ 0.87
PCNX4-213ENST00000556907 SEC31BQ9NQW1 1179 aa20.5■□□□□ 0.87
PCNX4-213ENST00000556907 CHMP3Q9Y3E7 222 aa20.5■□□□□ 0.87
PCNX4-213ENST00000556907 FAM161AQ3B820 660 aa20.49■□□□□ 0.87
PCNX4-213ENST00000556907 ARHGAP27Q6ZUM4 889 aa20.49■□□□□ 0.87
PCNX4-213ENST00000556907 CCDC85AQ96PX6 553 aaPredicted RBP20.49■□□□□ 0.87
PCNX4-213ENST00000556907 ZBTB40Q9NUA8 1239 aa20.49■□□□□ 0.87
PCNX4-213ENST00000556907 BSDC1Q9NW68 430 aaPredicted RBP20.49■□□□□ 0.87
PCNX4-213ENST00000556907 ANKRD44Q8N8A2 993 aa20.48■□□□□ 0.87
PCNX4-213ENST00000556907 MPHOSPH8Q99549 860 aa20.48■□□□□ 0.87
PCNX4-213ENST00000556907 LRRFIP2Q9Y608 721 aaKnown RBP20.48■□□□□ 0.87
PCNX4-213ENST00000556907 LTBP3Q9NS15 1303 aa20.48■□□□□ 0.87
PCNX4-213ENST00000556907 TAF7LQ5H9L4 462 aa20.47■□□□□ 0.87
PCNX4-213ENST00000556907 MTX1Q13505 466 aa20.46■□□□□ 0.87
PCNX4-213ENST00000556907 CCDC136Q96JN2 1154 aa20.46■□□□□ 0.87
PCNX4-213ENST00000556907 PSMD1Q99460 953 aa20.46■□□□□ 0.87
PCNX4-213ENST00000556907 ZNF219Q9P2Y4 722 aaPredicted RBP20.46■□□□□ 0.87
PCNX4-213ENST00000556907 GOLGB1Q14789 3259 aaKnown RBP20.45■□□□□ 0.86
PCNX4-213ENST00000556907 TAF1P21675 1872 aa20.45■□□□□ 0.86
PCNX4-213ENST00000556907 FKBP4Q02790 459 aaKnown RBP eCLIP20.45■□□□□ 0.86
PCNX4-213ENST00000556907 SUPT20HQ8NEM7 779 aa20.45■□□□□ 0.86
PCNX4-213ENST00000556907 VPS33BQ9H267 617 aa20.45■□□□□ 0.86
PCNX4-213ENST00000556907 TAOK3Q9H2K8 898 aa20.45■□□□□ 0.86
PCNX4-213ENST00000556907 FBXO3Q9UK99 471 aa20.45■□□□□ 0.86
PCNX4-213ENST00000556907 FER1L6Q2WGJ9 1857 aa20.45■□□□□ 0.86
PCNX4-213ENST00000556907 MPNDQ8N594 471 aa20.44■□□□□ 0.86
PCNX4-213ENST00000556907 LRRC37AA6NMS7 1700 aa20.44■□□□□ 0.86
PCNX4-213ENST00000556907 B4GALNT3Q6L9W6 998 aa20.43■□□□□ 0.86
PCNX4-213ENST00000556907 DPP8Q6V1X1 898 aaPredicted RBP20.43■□□□□ 0.86
PCNX4-213ENST00000556907 RTFDC1Q9BY42 306 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms