RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 HSP90AB3PQ58FF7 597 aa15.64■□□□□ 0.09
ACTN1-221ENST00000556571 GLIS2Q9BZE0 524 aaPredicted RBP15.64■□□□□ 0.09
ACTN1-221ENST00000556571 RGS19P49795 217 aa15.63■□□□□ 0.09
ACTN1-221ENST00000556571 MLLT1Q03111 559 aaPredicted RBP15.63■□□□□ 0.09
ACTN1-221ENST00000556571 DDX46Q7L014 1031 aaKnown RBP15.63■□□□□ 0.09
ACTN1-221ENST00000556571 CDC37L1Q7L3B6 337 aa15.63■□□□□ 0.09
ACTN1-221ENST00000556571 BABAM1Q9NWV8 329 aa15.63■□□□□ 0.09
ACTN1-221ENST00000556571 TSKSQ9UJT2 592 aa15.63■□□□□ 0.09
ACTN1-221ENST00000556571 THSD7BQ9C0I4 1608 aa15.63■□□□□ 0.09
ACTN1-221ENST00000556571 RAD17O75943 681 aa15.62■□□□□ 0.09
ACTN1-221ENST00000556571 SLC34A2O95436 690 aa15.62■□□□□ 0.09
ACTN1-221ENST00000556571 HIRAP54198 1017 aaPredicted RBP15.62■□□□□ 0.09
ACTN1-221ENST00000556571 BRPF1P55201 1214 aaPredicted RBP15.62■□□□□ 0.09
ACTN1-221ENST00000556571 NLRP10Q86W26 655 aa15.62■□□□□ 0.09
ACTN1-221ENST00000556571 TRPM7Q96QT4 1865 aa15.61■□□□□ 0.09
ACTN1-221ENST00000556571 H7C1D1 291 aa15.61■□□□□ 0.09
ACTN1-221ENST00000556571 HCLS1P14317 486 aaPredicted RBP15.61■□□□□ 0.09
ACTN1-221ENST00000556571 GRAPQ13588 217 aa15.61■□□□□ 0.09
ACTN1-221ENST00000556571 PROSER3Q2NL68 480 aa15.61■□□□□ 0.09
ACTN1-221ENST00000556571 COPS6Q7L5N1 327 aa15.61■□□□□ 0.09
ACTN1-221ENST00000556571 TMC4Q7Z404 712 aa15.61■□□□□ 0.09
ACTN1-221ENST00000556571 GRAPLQ8TC17 118 aaPredicted RBP15.61■□□□□ 0.09
ACTN1-221ENST00000556571 TRMT112Q9UI30 125 aaKnown RBP15.61■□□□□ 0.09
ACTN1-221ENST00000556571 CNOT7Q9UIV1 285 aaKnown RBP15.61■□□□□ 0.09
ACTN1-221ENST00000556571 ANXA1P04083 346 aa15.6■□□□□ 0.09
ACTN1-221ENST00000556571 TCIRG1Q13488 830 aa15.6■□□□□ 0.09
ACTN1-221ENST00000556571 ZNF408Q9H9D4 720 aa15.6■□□□□ 0.09
ACTN1-221ENST00000556571 SH3TC1Q8TE82 1336 aa15.6■□□□□ 0.09
ACTN1-221ENST00000556571 DLG5Q8TDM6 1919 aa15.6■□□□□ 0.09
ACTN1-221ENST00000556571 RIPK4P57078 832 aa15.59■□□□□ 0.09
ACTN1-221ENST00000556571 AIMP1Q12904 312 aaKnown RBP15.59■□□□□ 0.09
ACTN1-221ENST00000556571 NOGQ13253 232 aa15.59■□□□□ 0.09
ACTN1-221ENST00000556571 TRPM4Q8TD43 1214 aa15.59■□□□□ 0.09
ACTN1-221ENST00000556571 XAGE3Q8WTP9 111 aa15.59■□□□□ 0.09
ACTN1-221ENST00000556571 MCOLN1Q9GZU1 580 aa15.59■□□□□ 0.09
ACTN1-221ENST00000556571 YDJCA8MPS7 323 aa15.58■□□□□ 0.08
ACTN1-221ENST00000556571 DPF2Q92785 391 aa15.58■□□□□ 0.08
ACTN1-221ENST00000556571 LMOD3Q0VAK6 560 aa15.57■□□□□ 0.08
ACTN1-221ENST00000556571 USP48Q86UV5 1035 aa15.57■□□□□ 0.08
ACTN1-221ENST00000556571 MICALL2Q8IY33 904 aa15.57■□□□□ 0.08
ACTN1-221ENST00000556571 HUNKP57058 714 aa15.56■□□□□ 0.08
ACTN1-221ENST00000556571 WASHC4Q2M389 1173 aa15.56■□□□□ 0.08
ACTN1-221ENST00000556571 NECTIN2Q92692 538 aa15.56■□□□□ 0.08
ACTN1-221ENST00000556571 SHTN1A0MZ66 631 aa15.55■□□□□ 0.08
ACTN1-221ENST00000556571 DGKZQ13574 1117 aa15.55■□□□□ 0.08
ACTN1-221ENST00000556571 CFAP44Q96MT7 982 aa15.55■□□□□ 0.08
ACTN1-221ENST00000556571 NSFL1CQ9UNZ2 370 aaKnown RBP15.55■□□□□ 0.08
ACTN1-221ENST00000556571 ZBTB12Q9Y330 459 aaPredicted RBP15.55■□□□□ 0.08
ACTN1-221ENST00000556571 PSMD14O00487 310 aa15.54■□□□□ 0.08
ACTN1-221ENST00000556571 RPS12P25398 132 aaKnown RBP15.54■□□□□ 0.08
ACTN1-221ENST00000556571 TMPOP42166 694 aaKnown RBP15.54■□□□□ 0.08
ACTN1-221ENST00000556571 SF3B3Q15393 1217 aaKnown RBP15.54■□□□□ 0.08
ACTN1-221ENST00000556571 SAMD7Q7Z3H4 446 aa15.54■□□□□ 0.08
ACTN1-221ENST00000556571 KRT26Q7Z3Y9 468 aa15.54■□□□□ 0.08
ACTN1-221ENST00000556571 ZIC5Q96T25 663 aa15.54■□□□□ 0.08
ACTN1-221ENST00000556571 C6orf229H3BNL8 230 aa15.53■□□□□ 0.08
ACTN1-221ENST00000556571 TBC1D10BQ4KMP7 808 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-221ENST00000556571 RGMBQ6NW40 437 aa15.53■□□□□ 0.08
ACTN1-221ENST00000556571 C2orf69Q8N8R5 385 aa15.53■□□□□ 0.08
ACTN1-221ENST00000556571 PLBD2Q8NHP8 589 aa15.53■□□□□ 0.08
ACTN1-221ENST00000556571 CCDC102AQ96A19 550 aa15.53■□□□□ 0.08
ACTN1-221ENST00000556571 DCPSQ96C86 337 aaKnown RBP15.53■□□□□ 0.08
ACTN1-221ENST00000556571 DBNDD1Q9H9R9 158 aa15.53■□□□□ 0.08
ACTN1-221ENST00000556571 GBA2Q9HCG7 927 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-221ENST00000556571 ANKRD36CQ5JPF3 1778 aa15.52■□□□□ 0.08
ACTN1-221ENST00000556571 CHL1O00533 1208 aa15.52■□□□□ 0.08
ACTN1-221ENST00000556571 RIMBP2O15034 1052 aa15.52■□□□□ 0.08
ACTN1-221ENST00000556571 DLK2Q6UY11 383 aa15.52■□□□□ 0.08
ACTN1-221ENST00000556571 ANKRD13DQ6ZTN6 518 aa15.52■□□□□ 0.08
ACTN1-221ENST00000556571 CELF1Q92879 486 aaKnown RBP15.52■□□□□ 0.08
ACTN1-221ENST00000556571 FAM89AQ96GI7 184 aa15.52■□□□□ 0.08
ACTN1-221ENST00000556571 EYA3Q99504 573 aa15.52■□□□□ 0.08
ACTN1-221ENST00000556571 POLLQ9UGP5 575 aa15.52■□□□□ 0.08
ACTN1-221ENST00000556571 CASP8AP2Q9UKL3 1982 aa15.52■□□□□ 0.07
ACTN1-221ENST00000556571 FAM155AB1AL88 458 aaPredicted RBP15.51■□□□□ 0.07
ACTN1-221ENST00000556571 GPSM2P81274 684 aa15.51■□□□□ 0.07
ACTN1-221ENST00000556571 ISCA1Q9BUE6 129 aa15.51■□□□□ 0.07
ACTN1-221ENST00000556571 SAGE1Q9NXZ1 904 aa15.51■□□□□ 0.07
ACTN1-221ENST00000556571 CHPF2Q9P2E5 772 aa15.51■□□□□ 0.07
ACTN1-221ENST00000556571 DUOX1Q9NRD9 1551 aa15.5■□□□□ 0.07
ACTN1-221ENST00000556571 ECE2O60344 883 aa15.5■□□□□ 0.07
ACTN1-221ENST00000556571 EGFRP00533 1210 aa15.5■□□□□ 0.07
ACTN1-221ENST00000556571 HOXB7P09629 217 aa15.5■□□□□ 0.07
ACTN1-221ENST00000556571 ZNF157P51786 506 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-221ENST00000556571 KRT24Q2M2I5 525 aa15.5■□□□□ 0.07
ACTN1-221ENST00000556571 RBM26Q5T8P6 1007 aaKnown RBP15.5■□□□□ 0.07
ACTN1-221ENST00000556571 HDGFL1Q5TGJ6 251 aa15.5■□□□□ 0.07
ACTN1-221ENST00000556571 ZNF428Q96B54 188 aa15.5■□□□□ 0.07
ACTN1-221ENST00000556571 DBF4Q9UBU7 674 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-221ENST00000556571 ATP5J2-PTCD1G3V325 749 aa15.49■□□□□ 0.07
ACTN1-221ENST00000556571 RPS8P62241 208 aaKnown RBP15.49■□□□□ 0.07
ACTN1-221ENST00000556571 KIF23Q02241 960 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-221ENST00000556571 TRIM28Q13263 835 aaKnown RBP15.49■□□□□ 0.07
ACTN1-221ENST00000556571 RALBP1Q15311 655 aa15.49■□□□□ 0.07
ACTN1-221ENST00000556571 DOK7Q18PE1 504 aa15.49■□□□□ 0.07
ACTN1-221ENST00000556571 TBC1D16Q8TBP0 767 aa15.49■□□□□ 0.07
ACTN1-221ENST00000556571 ZC3H12CQ9C0D7 883 aaKnown RBP15.49■□□□□ 0.07
ACTN1-221ENST00000556571 KCNQ5Q9NR82 932 aa15.49■□□□□ 0.07
ACTN1-221ENST00000556571 LAMB2P55268 1798 aa15.49■□□□□ 0.07
ACTN1-221ENST00000556571 PDE4DIPQ5VU43 2346 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms