RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 HOXA10P31260 410 aaPredicted RBP25.5■■□□□ 1.67
RCCD1-205ENST00000556333 ATF7IPQ6VMQ6 1270 aa25.5■■□□□ 1.67
RCCD1-205ENST00000556333 CCDC85AQ96PX6 553 aaPredicted RBP25.5■■□□□ 1.67
RCCD1-205ENST00000556333 CRAMP1Q96RY5 1269 aa25.5■■□□□ 1.67
RCCD1-205ENST00000556333 RCAN3Q9UKA8 241 aa25.5■■□□□ 1.67
RCCD1-205ENST00000556333 FER1L6Q2WGJ9 1857 aa25.49■■□□□ 1.67
RCCD1-205ENST00000556333 ABCC4O15439 1325 aa25.49■■□□□ 1.67
RCCD1-205ENST00000556333 CCT4P50991 539 aaKnown RBP25.49■■□□□ 1.67
RCCD1-205ENST00000556333 SF3B3Q15393 1217 aaKnown RBP25.49■■□□□ 1.67
RCCD1-205ENST00000556333 CCDC152Q4G0S7 254 aa25.49■■□□□ 1.67
RCCD1-205ENST00000556333 CLUAP1Q96AJ1 413 aa25.49■■□□□ 1.67
RCCD1-205ENST00000556333 TRIM27P14373 513 aa25.48■■□□□ 1.67
RCCD1-205ENST00000556333 CTSWP56202 376 aa25.48■■□□□ 1.67
RCCD1-205ENST00000556333 SBF1O95248 1867 aa25.47■■□□□ 1.67
RCCD1-205ENST00000556333 CASP7P55210 303 aa25.47■■□□□ 1.67
RCCD1-205ENST00000556333 TNNQ9UQP3 1299 aa25.47■■□□□ 1.67
RCCD1-205ENST00000556333 PPEF1O14829 653 aaPredicted RBP25.46■■□□□ 1.67
RCCD1-205ENST00000556333 GRAPQ13588 217 aa25.45■■□□□ 1.66
RCCD1-205ENST00000556333 SOGA3Q5TF21 947 aa25.45■■□□□ 1.66
RCCD1-205ENST00000556333 FTSJ3Q8IY81 847 aaKnown RBP25.45■■□□□ 1.66
RCCD1-205ENST00000556333 GRAPLQ8TC17 118 aaPredicted RBP25.45■■□□□ 1.66
RCCD1-205ENST00000556333 TMX4Q9H1E5 349 aaPredicted RBP25.45■■□□□ 1.66
RCCD1-205ENST00000556333 NBPF7P0C2Y1 421 aaPredicted RBP25.44■■□□□ 1.66
RCCD1-205ENST00000556333 TTLL11Q8NHH1 800 aa25.44■■□□□ 1.66
RCCD1-205ENST00000556333 PLA2G12BQ9BX93 195 aa25.44■■□□□ 1.66
RCCD1-205ENST00000556333 CHMP3Q9Y3E7 222 aa25.44■■□□□ 1.66
RCCD1-205ENST00000556333 CCDC93Q567U6 631 aa25.43■■□□□ 1.66
RCCD1-205ENST00000556333 SEC31BQ9NQW1 1179 aa25.43■■□□□ 1.66
RCCD1-205ENST00000556333 BBOX1O75936 387 aa25.42■■□□□ 1.66
RCCD1-205ENST00000556333 OLFM4Q6UX06 510 aa25.42■■□□□ 1.66
RCCD1-205ENST00000556333 CELF1Q92879 486 aaKnown RBP25.42■■□□□ 1.66
RCCD1-205ENST00000556333 COL4A1P02462 1669 aa25.42■■□□□ 1.66
RCCD1-205ENST00000556333 RASSF7Q02833 373 aa25.41■■□□□ 1.66
RCCD1-205ENST00000556333 INTS3Q68E01 1043 aaKnown RBP25.41■■□□□ 1.66
RCCD1-205ENST00000556333 DZIP1LQ8IYY4 767 aaKnown RBP25.41■■□□□ 1.66
RCCD1-205ENST00000556333 C7orf43Q8WVR3 580 aa25.41■■□□□ 1.66
RCCD1-205ENST00000556333 SUCLG2Q96I99 432 aa25.41■■□□□ 1.66
RCCD1-205ENST00000556333 USP44Q9H0E7 712 aa25.41■■□□□ 1.66
RCCD1-205ENST00000556333 GREM2Q9H772 168 aa25.41■■□□□ 1.66
RCCD1-205ENST00000556333 UTYO14607 1347 aa25.4■■□□□ 1.66
RCCD1-205ENST00000556333 GPBP1L1Q9HC44 474 aaPredicted RBP25.4■■□□□ 1.66
RCCD1-205ENST00000556333 RPS8P62241 208 aaKnown RBP25.39■■□□□ 1.66
RCCD1-205ENST00000556333 FOXO4P98177 505 aa25.39■■□□□ 1.66
RCCD1-205ENST00000556333 TMEM57Q8N5G2 664 aa25.39■■□□□ 1.66
RCCD1-205ENST00000556333 CDC5LQ99459 802 aaKnown RBP25.39■■□□□ 1.66
RCCD1-205ENST00000556333 LRRC37AA6NMS7 1700 aa25.39■■□□□ 1.65
RCCD1-205ENST00000556333 DICER1Q9UPY3 1922 aaKnown RBP25.39■■□□□ 1.65
RCCD1-205ENST00000556333 UBTFL1P0CB47 393 aaPredicted RBP25.38■■□□□ 1.65
RCCD1-205ENST00000556333 FAM161AQ3B820 660 aa25.38■■□□□ 1.65
RCCD1-205ENST00000556333 EPHA10Q5JZY3 1008 aa25.38■■□□□ 1.65
RCCD1-205ENST00000556333 CC2D2BQ6DHV5 1058 aa25.38■■□□□ 1.65
RCCD1-205ENST00000556333 LMBR1LQ6UX01 489 aa25.38■■□□□ 1.65
RCCD1-205ENST00000556333 ANKRD18AQ8IVF6 992 aa25.38■■□□□ 1.65
RCCD1-205ENST00000556333 RTKN2Q8IZC4 609 aa25.38■■□□□ 1.65
RCCD1-205ENST00000556333 ATP6V0A2Q9Y487 856 aa25.38■■□□□ 1.65
RCCD1-205ENST00000556333 PLIN1O60240 522 aa25.37■■□□□ 1.65
RCCD1-205ENST00000556333 CSF1RP07333 972 aa25.37■■□□□ 1.65
RCCD1-205ENST00000556333 ITGA6P23229 1130 aa25.37■■□□□ 1.65
RCCD1-205ENST00000556333 TMC4Q7Z404 712 aa25.37■■□□□ 1.65
RCCD1-205ENST00000556333 SP8Q8IXZ3 490 aa25.37■■□□□ 1.65
RCCD1-205ENST00000556333 TAOK3Q9H2K8 898 aa25.37■■□□□ 1.65
RCCD1-205ENST00000556333 RTL9Q8NET4 1388 aa25.36■■□□□ 1.65
RCCD1-205ENST00000556333 NFKBIEO00221 500 aa25.36■■□□□ 1.65
RCCD1-205ENST00000556333 MS4A1P11836 297 aa25.36■■□□□ 1.65
RCCD1-205ENST00000556333 SLC51AQ86UW1 340 aa25.36■■□□□ 1.65
RCCD1-205ENST00000556333 ITPRIPQ8IWB1 547 aa25.36■■□□□ 1.65
RCCD1-205ENST00000556333 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.36■■□□□ 1.65
RCCD1-205ENST00000556333 BICC1Q9H694 974 aaKnown RBP25.36■■□□□ 1.65
RCCD1-205ENST00000556333 TIAM2Q8IVF5 1701 aa25.35■■□□□ 1.65
RCCD1-205ENST00000556333 ANKRD18BA2A2Z9 1011 aa25.35■■□□□ 1.65
RCCD1-205ENST00000556333 HSPA6P17066 643 aa25.35■■□□□ 1.65
RCCD1-205ENST00000556333 IFIT5Q13325 482 aaKnown RBP25.35■■□□□ 1.65
RCCD1-205ENST00000556333 MEIS3Q99687 375 aa25.35■■□□□ 1.65
RCCD1-205ENST00000556333 HDAC5Q9UQL6 1122 aa25.35■■□□□ 1.65
RCCD1-205ENST00000556333 IGHMBP2P38935 993 aaKnown RBP25.34■■□□□ 1.65
RCCD1-205ENST00000556333 CCDC57Q2TAC2 916 aa25.34■■□□□ 1.65
RCCD1-205ENST00000556333 KAZALD1Q96I82 304 aa25.34■■□□□ 1.65
RCCD1-205ENST00000556333 GNAI3P08754 354 aa25.33■■□□□ 1.65
RCCD1-205ENST00000556333 RLBP1P12271 317 aa25.33■■□□□ 1.65
RCCD1-205ENST00000556333 FKBP4Q02790 459 aaKnown RBP eCLIP25.33■■□□□ 1.65
RCCD1-205ENST00000556333 GRIPAP1Q4V328 841 aa25.33■■□□□ 1.65
RCCD1-205ENST00000556333 TAF7LQ5H9L4 462 aa25.33■■□□□ 1.65
RCCD1-205ENST00000556333 PANK1Q8TE04 598 aa25.33■■□□□ 1.65
RCCD1-205ENST00000556333 RNF181Q9P0P0 153 aa25.33■■□□□ 1.65
RCCD1-205ENST00000556333 C9orf131Q5VYM1 1079 aa25.32■■□□□ 1.64
RCCD1-205ENST00000556333 MPNDQ8N594 471 aa25.32■■□□□ 1.64
RCCD1-205ENST00000556333 MPHOSPH8Q99549 860 aa25.32■■□□□ 1.64
RCCD1-205ENST00000556333 LTBP3Q9NS15 1303 aa25.32■■□□□ 1.64
RCCD1-205ENST00000556333 LMNB1P20700 586 aa25.31■■□□□ 1.64
RCCD1-205ENST00000556333 DPP8Q6V1X1 898 aaPredicted RBP25.31■■□□□ 1.64
RCCD1-205ENST00000556333 LRRFIP2Q9Y608 721 aaKnown RBP25.31■■□□□ 1.64
RCCD1-205ENST00000556333 ANKRD44Q8N8A2 993 aa25.3■■□□□ 1.64
RCCD1-205ENST00000556333 ZNF526Q8TF50 670 aaPredicted RBP25.3■■□□□ 1.64
RCCD1-205ENST00000556333 NSFL1CQ9UNZ2 370 aaKnown RBP25.3■■□□□ 1.64
RCCD1-205ENST00000556333 A0A1B0GUL6 1792 aa25.29■■□□□ 1.64
RCCD1-205ENST00000556333 RABL6Q3YEC7 729 aaPredicted RBP25.29■■□□□ 1.64
RCCD1-205ENST00000556333 PSMD1Q99460 953 aa25.29■■□□□ 1.64
RCCD1-205ENST00000556333 ZNF277Q9NRM2 450 aaPredicted RBP25.29■■□□□ 1.64
RCCD1-205ENST00000556333 BSDC1Q9NW68 430 aaPredicted RBP25.29■■□□□ 1.64
RCCD1-205ENST00000556333 ANKIB1Q9P2G1 1089 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms