RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 RABL6Q3YEC7 729 aaPredicted RBP11.96□□□□□ -0.49
HNRNPC-220ENST00000555585 HSP90AB4PQ58FF6 505 aa11.96□□□□□ -0.49
HNRNPC-220ENST00000555585 TBC1D9BQ66K14 1250 aa11.96□□□□□ -0.49
HNRNPC-220ENST00000555585 SYNE4Q8N205 404 aa11.96□□□□□ -0.49
HNRNPC-220ENST00000555585 TFCP2L1Q9NZI6 479 aa11.96□□□□□ -0.49
HNRNPC-220ENST00000555585 PA2G4Q9UQ80 394 aaKnown RBP11.96□□□□□ -0.49
HNRNPC-220ENST00000555585 SH3TC1Q8TE82 1336 aa11.95□□□□□ -0.5
HNRNPC-220ENST00000555585 G3BP1Q13283 466 aaKnown RBP eCLIP11.95□□□□□ -0.55e-10■□□□□ 8.3
HNRNPC-220ENST00000555585 ZNF827Q17R98 1081 aa11.95□□□□□ -0.5
HNRNPC-220ENST00000555585 SETDB2Q96T68 719 aa11.95□□□□□ -0.5
HNRNPC-220ENST00000555585 PLA2G12BQ9BX93 195 aa11.95□□□□□ -0.5
HNRNPC-220ENST00000555585 LRRCC1Q9C099 1032 aa11.95□□□□□ -0.5
HNRNPC-220ENST00000555585 MYH3P11055 1940 aa11.95□□□□□ -0.5
HNRNPC-220ENST00000555585 PDE8AO60658 829 aa11.94□□□□□ -0.5
HNRNPC-220ENST00000555585 NTSR2O95665 410 aa11.94□□□□□ -0.5
HNRNPC-220ENST00000555585 HSP90B1P14625 803 aaKnown RBP11.94□□□□□ -0.5
HNRNPC-220ENST00000555585 GTF2E1P29083 439 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-220ENST00000555585 CAMKK2Q96RR4 588 aa11.94□□□□□ -0.5
HNRNPC-220ENST00000555585 NYXQ9GZU5 481 aa11.94□□□□□ -0.5
HNRNPC-220ENST00000555585 SIL1Q9H173 461 aa11.94□□□□□ -0.5
HNRNPC-220ENST00000555585 NOP58Q9Y2X3 529 aaKnown RBP11.94□□□□□ -0.5
HNRNPC-220ENST00000555585 TUBGCP6Q96RT7 1819 aa11.94□□□□□ -0.5
HNRNPC-220ENST00000555585 HCLS1P14317 486 aaPredicted RBP11.93□□□□□ -0.5
HNRNPC-220ENST00000555585 RFX5P48382 616 aaPredicted RBP11.93□□□□□ -0.5
HNRNPC-220ENST00000555585 CTSWP56202 376 aa11.93□□□□□ -0.5
HNRNPC-220ENST00000555585 CCDC57Q2TAC2 916 aa11.93□□□□□ -0.5
HNRNPC-220ENST00000555585 NUTM1Q86Y26 1132 aa11.93□□□□□ -0.5
HNRNPC-220ENST00000555585 ERC1Q8IUD2 1116 aa11.93□□□□□ -0.5
HNRNPC-220ENST00000555585 FLAD1Q8NFF5 587 aa11.93□□□□□ -0.5
HNRNPC-220ENST00000555585 KLHDC4Q8TBB5 520 aa11.93□□□□□ -0.5
HNRNPC-220ENST00000555585 RHPN1Q8TCX5 695 aa11.93□□□□□ -0.5
HNRNPC-220ENST00000555585 KIF1BPQ96EK5 621 aa11.93□□□□□ -0.5
HNRNPC-220ENST00000555585 CCDC85AQ96PX6 553 aaPredicted RBP11.93□□□□□ -0.5
HNRNPC-220ENST00000555585 DDX60Q8IY21 1712 aaKnown RBP11.93□□□□□ -0.5
HNRNPC-220ENST00000555585 LAMB2P55268 1798 aa11.92□□□□□ -0.5
HNRNPC-220ENST00000555585 COL24A1Q17RW2 1714 aa11.92□□□□□ -0.5
HNRNPC-220ENST00000555585 NPHP1O15259 732 aa11.92□□□□□ -0.5
HNRNPC-220ENST00000555585 CSF1RP07333 972 aa11.92□□□□□ -0.5
HNRNPC-220ENST00000555585 PTPN12Q05209 780 aaKnown RBP11.92□□□□□ -0.5
HNRNPC-220ENST00000555585 ERFEQ4G0M1 354 aa11.92□□□□□ -0.5
HNRNPC-220ENST00000555585 TAF7LQ5H9L4 462 aa11.92□□□□□ -0.5
HNRNPC-220ENST00000555585 NBPF5PQ86XG9 351 aaPredicted RBP11.92□□□□□ -0.5
HNRNPC-220ENST00000555585 C16orf71Q8IYS4 520 aaPredicted RBP11.92□□□□□ -0.5
HNRNPC-220ENST00000555585 IL1RAPL2Q9NP60 686 aa11.92□□□□□ -0.5
HNRNPC-220ENST00000555585 COPRSQ9NQ92 184 aa11.92□□□□□ -0.5
HNRNPC-220ENST00000555585 STK32BQ9NY57 414 aa11.92□□□□□ -0.5
HNRNPC-220ENST00000555585 EP400Q96L91 3159 aa11.92□□□□□ -0.5
HNRNPC-220ENST00000555585 GYS1P13807 737 aa11.91□□□□□ -0.5
HNRNPC-220ENST00000555585 IFIT5Q13325 482 aaKnown RBP11.91□□□□□ -0.5
HNRNPC-220ENST00000555585 FAM161AQ3B820 660 aa11.91□□□□□ -0.5
HNRNPC-220ENST00000555585 CHADLQ6NUI6 762 aa11.91□□□□□ -0.5
HNRNPC-220ENST00000555585 TPTE2Q6XPS3 522 aa11.91□□□□□ -0.5
HNRNPC-220ENST00000555585 DEFB132Q7Z7B7 95 aa11.91□□□□□ -0.5
HNRNPC-220ENST00000555585 COL23A1Q86Y22 540 aaPredicted RBP11.91□□□□□ -0.5
HNRNPC-220ENST00000555585 TTLL11Q8NHH1 800 aa11.91□□□□□ -0.5
HNRNPC-220ENST00000555585 ANKRD18BA2A2Z9 1011 aa11.9□□□□□ -0.5
HNRNPC-220ENST00000555585 NFIXQ14938 502 aa11.9□□□□□ -0.5
HNRNPC-220ENST00000555585 SLC15A2Q16348 729 aa11.9□□□□□ -0.5
HNRNPC-220ENST00000555585 CCDC125Q86Z20 511 aa11.9□□□□□ -0.5
HNRNPC-220ENST00000555585 ZNF594Q96JF6 807 aaPredicted RBP11.9□□□□□ -0.5
HNRNPC-220ENST00000555585 CARMIL3Q8ND23 1372 aa11.9□□□□□ -0.5
HNRNPC-220ENST00000555585 SASH1O94885 1247 aa11.89□□□□□ -0.51
HNRNPC-220ENST00000555585 ITGA6P23229 1130 aa11.89□□□□□ -0.51
HNRNPC-220ENST00000555585 CCDC152Q4G0S7 254 aa11.89□□□□□ -0.51
HNRNPC-220ENST00000555585 PLEKHM2Q8IWE5 1019 aa11.89□□□□□ -0.51
HNRNPC-220ENST00000555585 CLASRPQ8N2M8 674 aaKnown RBP11.89□□□□□ -0.51
HNRNPC-220ENST00000555585 OTUD7AQ8TE49 926 aaPredicted RBP11.89□□□□□ -0.51
HNRNPC-220ENST00000555585 GREM2Q9H772 168 aa11.89□□□□□ -0.51
HNRNPC-220ENST00000555585 CASZ1Q86V15 1759 aa11.89□□□□□ -0.51
HNRNPC-220ENST00000555585 PNPLA7Q6ZV29 1317 aa11.88□□□□□ -0.51
HNRNPC-220ENST00000555585 EYA2O00167 538 aa11.88□□□□□ -0.51
HNRNPC-220ENST00000555585 TM4SF1P30408 202 aa11.88□□□□□ -0.51
HNRNPC-220ENST00000555585 EVX2Q03828 476 aa11.88□□□□□ -0.51
HNRNPC-220ENST00000555585 SLC10A5Q5PT55 438 aa11.88□□□□□ -0.51
HNRNPC-220ENST00000555585 NLGN1Q8N2Q7 840 aa11.88□□□□□ -0.51
HNRNPC-220ENST00000555585 CCDC24Q8N4L8 307 aa11.88□□□□□ -0.51
HNRNPC-220ENST00000555585 ANO8Q9HCE9 1232 aaPredicted RBP11.88□□□□□ -0.51
HNRNPC-220ENST00000555585 QSER1Q2KHR3 1735 aa11.87□□□□□ -0.51
HNRNPC-220ENST00000555585 CIAO1O76071 339 aa11.87□□□□□ -0.51
HNRNPC-220ENST00000555585 SERPINB2P05120 415 aa11.87□□□□□ -0.51
HNRNPC-220ENST00000555585 IFIT2P09913 472 aaKnown RBP11.87□□□□□ -0.51
HNRNPC-220ENST00000555585 IL15P40933 162 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-220ENST00000555585 TFCP2Q12800 502 aa11.87□□□□□ -0.51
HNRNPC-220ENST00000555585 LRRC24Q50LG9 513 aa11.87□□□□□ -0.51
HNRNPC-220ENST00000555585 AACSQ86V21 672 aa11.87□□□□□ -0.51
HNRNPC-220ENST00000555585 CNBD1Q8NA66 436 aa11.87□□□□□ -0.51
HNRNPC-220ENST00000555585 NLRP3Q96P20 1036 aa11.87□□□□□ -0.51
HNRNPC-220ENST00000555585 PUS3Q9BZE2 481 aaKnown RBP11.87□□□□□ -0.51
HNRNPC-220ENST00000555585 CNNM1Q9NRU3 951 aa11.87□□□□□ -0.51
HNRNPC-220ENST00000555585 ABCC12Q96J65 1359 aa11.87□□□□□ -0.51
HNRNPC-220ENST00000555585 SPEF2Q9C093 1822 aa11.86□□□□□ -0.51
HNRNPC-220ENST00000555585 SPDYE4A6NLX3 237 aa11.86□□□□□ -0.51
HNRNPC-220ENST00000555585 MX1P20591 662 aa11.86□□□□□ -0.51
HNRNPC-220ENST00000555585 PDE1AP54750 535 aa11.86□□□□□ -0.51
HNRNPC-220ENST00000555585 ST5P78524 1137 aa11.86□□□□□ -0.51
HNRNPC-220ENST00000555585 LDHAL6AQ6ZMR3 332 aa11.86□□□□□ -0.51
HNRNPC-220ENST00000555585 ATG9AQ7Z3C6 839 aa11.86□□□□□ -0.51
HNRNPC-220ENST00000555585 SEC31BQ9NQW1 1179 aa11.86□□□□□ -0.51
HNRNPC-220ENST00000555585 FBXO3Q9UK99 471 aa11.86□□□□□ -0.51
HNRNPC-220ENST00000555585 RTL9Q8NET4 1388 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms