RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 TPSG1Q9NRR2 321 aa10□□□□□ -0.81
SEC23A-209ENST00000555363 NAGPAQ9UK23 515 aa10□□□□□ -0.81
SEC23A-209ENST00000555363 SASH3O75995 380 aa9.99□□□□□ -0.81
SEC23A-209ENST00000555363 MLLT1Q03111 559 aaPredicted RBP9.99□□□□□ -0.81
SEC23A-209ENST00000555363 MYO19Q96H55 970 aa9.99□□□□□ -0.81
SEC23A-209ENST00000555363 PRIMPOLQ96LW4 560 aa9.99□□□□□ -0.81
SEC23A-209ENST00000555363 USP21Q9UK80 565 aa9.99□□□□□ -0.81
SEC23A-209ENST00000555363 MAP3K6O95382 1288 aa9.98□□□□□ -0.81
SEC23A-209ENST00000555363 NRG1Q02297 640 aaPredicted RBP9.98□□□□□ -0.81
SEC23A-209ENST00000555363 CMTR1Q8N1G2 835 aaKnown RBP9.98□□□□□ -0.81
SEC23A-209ENST00000555363 Q8N3U1 123 aa9.98□□□□□ -0.81
SEC23A-209ENST00000555363 PRMT3O60678 531 aa9.97□□□□□ -0.81
SEC23A-209ENST00000555363 RSPO4Q2I0M5 234 aaPredicted RBP9.97□□□□□ -0.81
SEC23A-209ENST00000555363 TREML1Q86YW5 311 aa9.97□□□□□ -0.81
SEC23A-209ENST00000555363 RGL4Q8IZJ4 473 aa9.97□□□□□ -0.81
SEC23A-209ENST00000555363 C11orf16Q9NQ32 467 aa9.97□□□□□ -0.81
SEC23A-209ENST00000555363 USP20Q9Y2K6 914 aa9.97□□□□□ -0.81
SEC23A-209ENST00000555363 RTCBQ9Y3I0 505 aaKnown RBP9.97□□□□□ -0.81
SEC23A-209ENST00000555363 GRNP28799 593 aaKnown RBP9.96□□□□□ -0.82
SEC23A-209ENST00000555363 ZMYM1Q5SVZ6 1142 aa9.96□□□□□ -0.82
SEC23A-209ENST00000555363 MSL1Q68DK7 614 aa9.96□□□□□ -0.82
SEC23A-209ENST00000555363 FRRS1LQ9P0K9 344 aa9.96□□□□□ -0.82
SEC23A-209ENST00000555363 ZFATQ9P243 1243 aa9.96□□□□□ -0.82
SEC23A-209ENST00000555363 XYLBO75191 536 aa9.95□□□□□ -0.82
SEC23A-209ENST00000555363 EIF2AK2P19525 551 aaKnown RBP9.95□□□□□ -0.82
SEC23A-209ENST00000555363 FKBP5Q13451 457 aaPredicted RBP9.95□□□□□ -0.82
SEC23A-209ENST00000555363 SWI5Q1ZZU3 235 aa9.95□□□□□ -0.82
SEC23A-209ENST00000555363 SHISA2Q6UWI4 295 aa9.95□□□□□ -0.82
SEC23A-209ENST00000555363 HFE2Q6ZVN8 426 aa9.95□□□□□ -0.82
SEC23A-209ENST00000555363 WFDC8Q8IUA0 241 aa9.95□□□□□ -0.82
SEC23A-209ENST00000555363 FMR1NBQ8N0W7 255 aaPredicted RBP9.95□□□□□ -0.82
SEC23A-209ENST00000555363 LRFN2Q9ULH4 789 aa9.95□□□□□ -0.82
SEC23A-209ENST00000555363 ACIN1Q9UKV3 1341 aaKnown RBP9.95□□□□□ -0.82
SEC23A-209ENST00000555363 SELPP16109 830 aa9.94□□□□□ -0.82
SEC23A-209ENST00000555363 GPLD1P80108 840 aa9.94□□□□□ -0.82
SEC23A-209ENST00000555363 MBTPS1Q14703 1052 aa9.94□□□□□ -0.82
SEC23A-209ENST00000555363 PERM1Q5SV97 790 aa9.94□□□□□ -0.82
SEC23A-209ENST00000555363 TXNRD3Q86VQ6 643 aa9.94□□□□□ -0.82
SEC23A-209ENST00000555363 TRPM4Q8TD43 1214 aa9.94□□□□□ -0.82
SEC23A-209ENST00000555363 LENG1Q96BZ8 264 aaPredicted RBP9.94□□□□□ -0.82
SEC23A-209ENST00000555363 LPIN3Q9BQK8 851 aa9.94□□□□□ -0.82
SEC23A-209ENST00000555363 SCO2A0A1W2PP80 73 aa9.93□□□□□ -0.82
SEC23A-209ENST00000555363 PSAPP07602 524 aa9.93□□□□□ -0.82
SEC23A-209ENST00000555363 ADGRE1Q14246 886 aa9.93□□□□□ -0.82
SEC23A-209ENST00000555363 NKAPLQ5M9Q1 402 aa9.93□□□□□ -0.82
SEC23A-209ENST00000555363 SMG9Q9H0W8 520 aaKnown RBP9.93□□□□□ -0.82
SEC23A-209ENST00000555363 ZBTB42B2RXF5 422 aa9.92□□□□□ -0.82
SEC23A-209ENST00000555363 OPLAHO14841 1288 aa9.92□□□□□ -0.82
SEC23A-209ENST00000555363 DYRK3O43781 588 aa9.92□□□□□ -0.82
SEC23A-209ENST00000555363 NRLP54845 237 aa9.92□□□□□ -0.82
SEC23A-209ENST00000555363 COX20Q5RI15 118 aa9.92□□□□□ -0.82
SEC23A-209ENST00000555363 RBSNQ9H1K0 784 aa9.92□□□□□ -0.82
SEC23A-209ENST00000555363 C1orf115Q9H7X2 142 aa9.92□□□□□ -0.82
SEC23A-209ENST00000555363 GHRHP01286 108 aa9.91□□□□□ -0.82
SEC23A-209ENST00000555363 BRD2P25440 801 aaKnown RBP9.91□□□□□ -0.82
SEC23A-209ENST00000555363 MKNK1Q9BUB5 465 aa9.91□□□□□ -0.82
SEC23A-209ENST00000555363 TLR7Q9NYK1 1049 aaKnown RBP9.91□□□□□ -0.82
SEC23A-209ENST00000555363 ITGB7P26010 798 aa9.9□□□□□ -0.82
SEC23A-209ENST00000555363 PLAURQ03405 335 aa9.9□□□□□ -0.82
SEC23A-209ENST00000555363 C16orf46Q6P387 395 aa9.9□□□□□ -0.82
SEC23A-209ENST00000555363 DTWD1Q8N5C7 304 aa9.9□□□□□ -0.82
SEC23A-209ENST00000555363 TP53INP1Q96A56 240 aa9.9□□□□□ -0.82
SEC23A-209ENST00000555363 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.89□□□□□ -0.83
SEC23A-209ENST00000555363 EGFRP00533 1210 aa9.89□□□□□ -0.83
SEC23A-209ENST00000555363 ELOAQ14241 798 aaKnown RBP9.89□□□□□ -0.83
SEC23A-209ENST00000555363 STK32AQ8WU08 396 aa9.89□□□□□ -0.83
SEC23A-209ENST00000555363 FAM13BQ9NYF5 915 aa9.89□□□□□ -0.83
SEC23A-209ENST00000555363 ZMIZ1Q9ULJ6 1067 aa9.89□□□□□ -0.83
SEC23A-209ENST00000555363 LOC102724428A0A0B4J2F2 783 aa9.88□□□□□ -0.83
SEC23A-209ENST00000555363 SIK1P57059 783 aa9.88□□□□□ -0.83
SEC23A-209ENST00000555363 FBXO11Q86XK2 927 aa9.88□□□□□ -0.83
SEC23A-209ENST00000555363 TTC9Q92623 222 aa9.88□□□□□ -0.83
SEC23A-209ENST00000555363 NSUN5Q96P11 429 aaKnown RBP9.88□□□□□ -0.83
SEC23A-209ENST00000555363 ARID3AQ99856 593 aa9.88□□□□□ -0.83
SEC23A-209ENST00000555363 J3QW42 95 aa9.87□□□□□ -0.83
SEC23A-209ENST00000555363 NAA30Q147X3 362 aaPredicted RBP9.87□□□□□ -0.83
SEC23A-209ENST00000555363 GRIK5Q16478 980 aa9.87□□□□□ -0.83
SEC23A-209ENST00000555363 GDF6Q6KF10 455 aaPredicted RBP9.87□□□□□ -0.83
SEC23A-209ENST00000555363 PLD4Q96BZ4 506 aa9.87□□□□□ -0.83
SEC23A-209ENST00000555363 SAP130Q9H0E3 1048 aa9.87□□□□□ -0.83
SEC23A-209ENST00000555363 ARID3CA6NKF2 412 aa9.86□□□□□ -0.83
SEC23A-209ENST00000555363 MMP20O60882 483 aa9.86□□□□□ -0.83
SEC23A-209ENST00000555363 PTCD1O75127 700 aaKnown RBP9.86□□□□□ -0.83
SEC23A-209ENST00000555363 PRSS36Q5K4E3 855 aa9.86□□□□□ -0.83
SEC23A-209ENST00000555363 ETFBKMTQ8IXQ9 262 aa9.86□□□□□ -0.83
SEC23A-209ENST00000555363 PIK3R5Q8WYR1 880 aa9.86□□□□□ -0.83
SEC23A-209ENST00000555363 CCDC97Q96F63 343 aaPredicted RBP9.86□□□□□ -0.83
SEC23A-209ENST00000555363 UBAP1LF5GYI3 381 aa9.85□□□□□ -0.83
SEC23A-209ENST00000555363 H2AFB1P0C5Y9 115 aa9.85□□□□□ -0.83
SEC23A-209ENST00000555363 H2AFB2P0C5Z0 115 aa9.85□□□□□ -0.83
SEC23A-209ENST00000555363 OCLNQ16625 522 aa9.85□□□□□ -0.83
SEC23A-209ENST00000555363 NLRP13Q86W25 1043 aa9.85□□□□□ -0.83
SEC23A-209ENST00000555363 CXXC1Q9P0U4 656 aaPredicted RBP9.85□□□□□ -0.83
SEC23A-209ENST00000555363 KCNMB2Q9Y691 235 aa9.85□□□□□ -0.83
SEC23A-209ENST00000555363 IREB2P48200 963 aaKnown RBP9.84□□□□□ -0.83
SEC23A-209ENST00000555363 IGF2-ASQ6U949 168 aa9.84□□□□□ -0.83
SEC23A-209ENST00000555363 COL26A1Q96A83 441 aa9.84□□□□□ -0.83
SEC23A-209ENST00000555363 ATG7O95352 703 aa9.83□□□□□ -0.84
SEC23A-209ENST00000555363 SOX18P35713 384 aa9.83□□□□□ -0.84
SEC23A-209ENST00000555363 TMEM164Q5U3C3 297 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms