RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 ZNRF3Q9ULT6 936 aa18.18■□□□□ 0.5
SPTLC2-202ENST00000554365 BBOX1O75936 387 aa18.17■□□□□ 0.5
SPTLC2-202ENST00000554365 TMPOP42166 694 aaKnown RBP18.17■□□□□ 0.5
SPTLC2-202ENST00000554365 ECE1P42892 770 aa18.17■□□□□ 0.5
SPTLC2-202ENST00000554365 CXCL9Q07325 125 aa18.17■□□□□ 0.5
SPTLC2-202ENST00000554365 LMOD3Q0VAK6 560 aa18.17■□□□□ 0.5
SPTLC2-202ENST00000554365 CYP4F22Q6NT55 531 aa18.17■□□□□ 0.5
SPTLC2-202ENST00000554365 NLRP10Q86W26 655 aa18.17■□□□□ 0.5
SPTLC2-202ENST00000554365 MPNDQ8N594 471 aa18.17■□□□□ 0.5
SPTLC2-202ENST00000554365 CAPNS2Q96L46 248 aa18.17■□□□□ 0.5
SPTLC2-202ENST00000554365 BABAM1Q9NWV8 329 aa18.17■□□□□ 0.5
SPTLC2-202ENST00000554365 TRMT112Q9UI30 125 aaKnown RBP18.17■□□□□ 0.5
SPTLC2-202ENST00000554365 GMPSP49915 693 aaPredicted RBP18.16■□□□□ 0.5
SPTLC2-202ENST00000554365 CST9Q5W186 159 aa18.16■□□□□ 0.5
SPTLC2-202ENST00000554365 DDX46Q7L014 1031 aaKnown RBP18.16■□□□□ 0.5
SPTLC2-202ENST00000554365 SP8Q8IXZ3 490 aa18.16■□□□□ 0.5
SPTLC2-202ENST00000554365 RTFDC1Q9BY42 306 aaPredicted RBP18.16■□□□□ 0.5
SPTLC2-202ENST00000554365 NEUROD2Q15784 382 aa18.15■□□□□ 0.5
SPTLC2-202ENST00000554365 NCBP3Q53F19 620 aaKnown RBP18.15■□□□□ 0.5
SPTLC2-202ENST00000554365 CIAPIN1Q6FI81 312 aa18.15■□□□□ 0.5
SPTLC2-202ENST00000554365 ZNF428Q96B54 188 aa18.15■□□□□ 0.5
SPTLC2-202ENST00000554365 GPR101Q96P66 508 aaPredicted RBP18.15■□□□□ 0.5
SPTLC2-202ENST00000554365 BEGAINQ9BUH8 593 aa18.15■□□□□ 0.5
SPTLC2-202ENST00000554365 ANKRD36CQ5JPF3 1778 aa18.14■□□□□ 0.5
SPTLC2-202ENST00000554365 RAD17O75943 681 aa18.14■□□□□ 0.49
SPTLC2-202ENST00000554365 TCIRG1Q13488 830 aa18.14■□□□□ 0.49
SPTLC2-202ENST00000554365 KRT24Q2M2I5 525 aa18.14■□□□□ 0.49
SPTLC2-202ENST00000554365 BCL2L13Q9BXK5 485 aa18.14■□□□□ 0.49
SPTLC2-202ENST00000554365 LAS1LQ9Y4W2 734 aaKnown RBP18.14■□□□□ 0.49
SPTLC2-202ENST00000554365 TLL2Q9Y6L7 1015 aa18.14■□□□□ 0.49
SPTLC2-202ENST00000554365 ZBED9Q6R2W3 1325 aa18.14■□□□□ 0.49
SPTLC2-202ENST00000554365 ZNF521Q96K83 1311 aa18.14■□□□□ 0.49
SPTLC2-202ENST00000554365 LAMB2P55268 1798 aa18.13■□□□□ 0.49
SPTLC2-202ENST00000554365 KIAA2012Q0VF49 1180 aa18.13■□□□□ 0.49
SPTLC2-202ENST00000554365 GRAPQ13588 217 aa18.13■□□□□ 0.49
SPTLC2-202ENST00000554365 GRAPLQ8TC17 118 aaPredicted RBP18.13■□□□□ 0.49
SPTLC2-202ENST00000554365 GLIS2Q9BZE0 524 aaPredicted RBP18.13■□□□□ 0.49
SPTLC2-202ENST00000554365 TRIM35Q9UPQ4 493 aa18.13■□□□□ 0.49
SPTLC2-202ENST00000554365 SH3TC1Q8TE82 1336 aa18.13■□□□□ 0.49
SPTLC2-202ENST00000554365 TRPM7Q96QT4 1865 aa18.12■□□□□ 0.49
SPTLC2-202ENST00000554365 CELF2O95319 508 aaKnown RBP18.12■□□□□ 0.49
SPTLC2-202ENST00000554365 TNIP1Q15025 636 aa18.12■□□□□ 0.49
SPTLC2-202ENST00000554365 SALL2Q9Y467 1007 aaPredicted RBP18.12■□□□□ 0.49
SPTLC2-202ENST00000554365 THSD7BQ9C0I4 1608 aa18.12■□□□□ 0.49
SPTLC2-202ENST00000554365 AOC2O75106 756 aa18.11■□□□□ 0.49
SPTLC2-202ENST00000554365 CCDC27Q2M243 656 aa18.11■□□□□ 0.49
SPTLC2-202ENST00000554365 ABHD8Q96I13 439 aa18.11■□□□□ 0.49
SPTLC2-202ENST00000554365 ZNF408Q9H9D4 720 aa18.11■□□□□ 0.49
SPTLC2-202ENST00000554365 CHPF2Q9P2E5 772 aa18.11■□□□□ 0.49
SPTLC2-202ENST00000554365 CDHR2Q9BYE9 1310 aa18.1■□□□□ 0.49
SPTLC2-202ENST00000554365 SAPCD2Q86UD0 394 aa18.1■□□□□ 0.49
SPTLC2-202ENST00000554365 TRPM4Q8TD43 1214 aa18.1■□□□□ 0.49
SPTLC2-202ENST00000554365 TSKSQ9UJT2 592 aa18.1■□□□□ 0.49
SPTLC2-202ENST00000554365 CHL1O00533 1208 aa18.09■□□□□ 0.49
SPTLC2-202ENST00000554365 HIRAP54198 1017 aaPredicted RBP18.09■□□□□ 0.49
SPTLC2-202ENST00000554365 HDGFL1Q5TGJ6 251 aa18.09■□□□□ 0.49
SPTLC2-202ENST00000554365 WWC1Q8IX03 1113 aa18.09■□□□□ 0.49
SPTLC2-202ENST00000554365 CNOT7Q9UIV1 285 aaKnown RBP18.09■□□□□ 0.49
SPTLC2-202ENST00000554365 SHTN1A0MZ66 631 aa18.08■□□□□ 0.48
SPTLC2-202ENST00000554365 YDJCA8MPS7 323 aa18.08■□□□□ 0.48
SPTLC2-202ENST00000554365 MAP2K2P36507 400 aa18.08■□□□□ 0.48
SPTLC2-202ENST00000554365 TMC4Q7Z404 712 aa18.08■□□□□ 0.48
SPTLC2-202ENST00000554365 PLBD2Q8NHP8 589 aa18.08■□□□□ 0.48
SPTLC2-202ENST00000554365 FAM89AQ96GI7 184 aa18.08■□□□□ 0.48
SPTLC2-202ENST00000554365 PGAP2Q9UHJ9 254 aa18.08■□□□□ 0.48
SPTLC2-202ENST00000554365 DUOX1Q9NRD9 1551 aa18.08■□□□□ 0.48
SPTLC2-202ENST00000554365 TAF1P21675 1872 aa18.07■□□□□ 0.48
SPTLC2-202ENST00000554365 ATP5J2-PTCD1G3V325 749 aa18.07■□□□□ 0.48
SPTLC2-202ENST00000554365 H7C1D1 291 aa18.07■□□□□ 0.48
SPTLC2-202ENST00000554365 WASHC4Q2M389 1173 aa18.07■□□□□ 0.48
SPTLC2-202ENST00000554365 RTL5Q5HYW3 569 aaPredicted RBP18.07■□□□□ 0.48
SPTLC2-202ENST00000554365 CDC37L1Q7L3B6 337 aa18.07■□□□□ 0.48
SPTLC2-202ENST00000554365 MICALL2Q8IY33 904 aa18.07■□□□□ 0.48
SPTLC2-202ENST00000554365 ZC3H15Q8WU90 426 aaKnown RBP18.07■□□□□ 0.48
SPTLC2-202ENST00000554365 NSFL1CQ9UNZ2 370 aaKnown RBP18.07■□□□□ 0.48
SPTLC2-202ENST00000554365 ZBTB12Q9Y330 459 aaPredicted RBP18.07■□□□□ 0.48
SPTLC2-202ENST00000554365 RIMBP2O15034 1052 aa18.06■□□□□ 0.48
SPTLC2-202ENST00000554365 ANKRD13DQ6ZTN6 518 aa18.06■□□□□ 0.48
SPTLC2-202ENST00000554365 CELF1Q92879 486 aaKnown RBP18.06■□□□□ 0.48
SPTLC2-202ENST00000554365 DBNDD1Q9H9R9 158 aa18.06■□□□□ 0.48
SPTLC2-202ENST00000554365 C6orf229H3BNL8 230 aa18.05■□□□□ 0.48
SPTLC2-202ENST00000554365 USP48Q86UV5 1035 aa18.05■□□□□ 0.48
SPTLC2-202ENST00000554365 ISCA1Q9BUE6 129 aa18.05■□□□□ 0.48
SPTLC2-202ENST00000554365 DBF4Q9UBU7 674 aaPredicted RBP18.05■□□□□ 0.48
SPTLC2-202ENST00000554365 DDX60Q8IY21 1712 aaKnown RBP18.05■□□□□ 0.48
SPTLC2-202ENST00000554365 LRRC37AA6NMS7 1700 aa18.04■□□□□ 0.48
SPTLC2-202ENST00000554365 CCDC85CA6NKD9 419 aa18.04■□□□□ 0.48
SPTLC2-202ENST00000554365 PSMD14O00487 310 aa18.04■□□□□ 0.48
SPTLC2-202ENST00000554365 HHIPL1Q96JK4 782 aa18.04■□□□□ 0.48
SPTLC2-202ENST00000554365 HOXB7P09629 217 aa18.03■□□□□ 0.48
SPTLC2-202ENST00000554365 GPSM2P81274 684 aa18.03■□□□□ 0.48
SPTLC2-202ENST00000554365 SF3B3Q15393 1217 aaKnown RBP18.03■□□□□ 0.48
SPTLC2-202ENST00000554365 TBC1D10BQ4KMP7 808 aaPredicted RBP18.03■□□□□ 0.48
SPTLC2-202ENST00000554365 DLK2Q6UY11 383 aa18.03■□□□□ 0.48
SPTLC2-202ENST00000554365 SAMD7Q7Z3H4 446 aa18.03■□□□□ 0.48
SPTLC2-202ENST00000554365 SPINK5Q9NQ38 1064 aaPredicted RBP18.03■□□□□ 0.48
SPTLC2-202ENST00000554365 HYPKQ9NX55 129 aa18.03■□□□□ 0.48
SPTLC2-202ENST00000554365 CA12O43570 354 aa18.02■□□□□ 0.48
SPTLC2-202ENST00000554365 BRPF1P55201 1214 aaPredicted RBP18.02■□□□□ 0.48
SPTLC2-202ENST00000554365 DOK7Q18PE1 504 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms