RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 SF3B3Q15393 1217 aaKnown RBP8.51□□□□□ -1.05
LINC00517-202ENST00000554257 ZNF652Q9Y2D9 606 aa8.51□□□□□ -1.05
LINC00517-202ENST00000554257 SCN9AQ15858 1988 aa8.51□□□□□ -1.05
LINC00517-202ENST00000554257 ECM29Q5VYK3 1845 aa8.51□□□□□ -1.05
LINC00517-202ENST00000554257 PTPN12Q05209 780 aaKnown RBP8.5□□□□□ -1.05
LINC00517-202ENST00000554257 NEXNQ0ZGT2 675 aa8.5□□□□□ -1.05
LINC00517-202ENST00000554257 SLC51AQ86UW1 340 aa8.5□□□□□ -1.05
LINC00517-202ENST00000554257 UTP14AQ9BVJ6 771 aaKnown RBP8.5□□□□□ -1.05
LINC00517-202ENST00000554257 TIAM2Q8IVF5 1701 aa8.5□□□□□ -1.05
LINC00517-202ENST00000554257 ZNF609O15014 1411 aa8.5□□□□□ -1.05
LINC00517-202ENST00000554257 ZPR1O75312 459 aa8.5□□□□□ -1.05
LINC00517-202ENST00000554257 CTSWP56202 376 aa8.5□□□□□ -1.05
LINC00517-202ENST00000554257 RPAP2Q8IXW5 612 aaPredicted RBP8.5□□□□□ -1.05
LINC00517-202ENST00000554257 VGLL2Q8N8G2 317 aa8.5□□□□□ -1.05
LINC00517-202ENST00000554257 DCTPP1Q9H773 170 aa8.5□□□□□ -1.05
LINC00517-202ENST00000554257 SH3TC1Q8TE82 1336 aa8.5□□□□□ -1.05
LINC00517-202ENST00000554257 UBTFL1P0CB47 393 aaPredicted RBP8.5□□□□□ -1.05
LINC00517-202ENST00000554257 SF3B2Q13435 895 aaKnown RBP8.5□□□□□ -1.05
LINC00517-202ENST00000554257 ATG9AQ7Z3C6 839 aa8.5□□□□□ -1.05
LINC00517-202ENST00000554257 NUTM1Q86Y26 1132 aa8.5□□□□□ -1.05
LINC00517-202ENST00000554257 SLC16A10Q8TF71 515 aa8.5□□□□□ -1.05
LINC00517-202ENST00000554257 COL4A5P29400 1685 aa8.5□□□□□ -1.05
LINC00517-202ENST00000554257 PDE8AO60658 829 aa8.49□□□□□ -1.05
LINC00517-202ENST00000554257 KCNA3P22001 575 aa8.49□□□□□ -1.05
LINC00517-202ENST00000554257 PPP1R42Q7Z4L9 355 aa8.49□□□□□ -1.05
LINC00517-202ENST00000554257 COPRSQ9NQ92 184 aa8.49□□□□□ -1.05
LINC00517-202ENST00000554257 ZNF330Q9Y3S2 320 aaPredicted RBP8.49□□□□□ -1.05
LINC00517-202ENST00000554257 ADAMTSL1Q8N6G6 1762 aa8.49□□□□□ -1.05
LINC00517-202ENST00000554257 IRS4O14654 1257 aaPredicted RBP8.49□□□□□ -1.05
LINC00517-202ENST00000554257 SERPINB2P05120 415 aa8.49□□□□□ -1.05
LINC00517-202ENST00000554257 HOXA10P31260 410 aaPredicted RBP8.48□□□□□ -1.05
LINC00517-202ENST00000554257 NLGN1Q8N2Q7 840 aa8.48□□□□□ -1.05
LINC00517-202ENST00000554257 GREM2Q9H772 168 aa8.48□□□□□ -1.05
LINC00517-202ENST00000554257 DDX60LQ5H9U9 1706 aaKnown RBP8.48□□□□□ -1.05
LINC00517-202ENST00000554257 SETDB2Q96T68 719 aa8.48□□□□□ -1.05
LINC00517-202ENST00000554257 SASH1O94885 1247 aa8.48□□□□□ -1.05
LINC00517-202ENST00000554257 NYXQ9GZU5 481 aa8.48□□□□□ -1.05
LINC00517-202ENST00000554257 MMP10P09238 476 aa8.47□□□□□ -1.05
LINC00517-202ENST00000554257 HCLS1P14317 486 aaPredicted RBP8.47□□□□□ -1.05
LINC00517-202ENST00000554257 PDE4AP27815 886 aa8.47□□□□□ -1.05
LINC00517-202ENST00000554257 FAM161AQ3B820 660 aa8.47□□□□□ -1.05
LINC00517-202ENST00000554257 TRMT112Q9UI30 125 aaKnown RBP8.47□□□□□ -1.05
LINC00517-202ENST00000554257 NUCB1Q02818 461 aa8.47□□□□□ -1.05
LINC00517-202ENST00000554257 B4GALNT3Q6L9W6 998 aa8.47□□□□□ -1.05
LINC00517-202ENST00000554257 LMBR1LQ6UX01 489 aa8.47□□□□□ -1.05
LINC00517-202ENST00000554257 CHMP4BQ9H444 224 aaKnown RBP8.47□□□□□ -1.05
LINC00517-202ENST00000554257 C9orf78Q9NZ63 289 aaPredicted RBP8.47□□□□□ -1.05
LINC00517-202ENST00000554257 RIPOR2Q9Y4F9 1068 aa8.47□□□□□ -1.05
LINC00517-202ENST00000554257 UTRNP46939 3433 aa8.47□□□□□ -1.05
LINC00517-202ENST00000554257 ZBTB22O15209 634 aa8.46□□□□□ -1.05
LINC00517-202ENST00000554257 CIAO1O76071 339 aa8.46□□□□□ -1.05
LINC00517-202ENST00000554257 R3HDM1Q15032 1099 aaKnown RBP8.46□□□□□ -1.05
LINC00517-202ENST00000554257 MSL1Q68DK7 614 aa8.46□□□□□ -1.05
LINC00517-202ENST00000554257 KLHDC4Q8TBB5 520 aa8.46□□□□□ -1.05
LINC00517-202ENST00000554257 MTFR1LQ9H019 292 aa8.46□□□□□ -1.05
LINC00517-202ENST00000554257 LAMA4Q16363 1823 aa8.46□□□□□ -1.05
LINC00517-202ENST00000554257 COL1A1P02452 1464 aaPredicted RBP8.46□□□□□ -1.06
LINC00517-202ENST00000554257 PA2G4Q9UQ80 394 aaKnown RBP8.46□□□□□ -1.06
LINC00517-202ENST00000554257 CENPQQ7L2Z9 268 aaPredicted RBP8.45□□□□□ -1.06
LINC00517-202ENST00000554257 C7orf43Q8WVR3 580 aa8.45□□□□□ -1.06
LINC00517-202ENST00000554257 SEC31BQ9NQW1 1179 aa8.45□□□□□ -1.06
LINC00517-202ENST00000554257 SRGNP10124 158 aa8.45□□□□□ -1.06
LINC00517-202ENST00000554257 BICDL1Q6ZP65 573 aa8.45□□□□□ -1.06
LINC00517-202ENST00000554257 NBPF5PQ86XG9 351 aaPredicted RBP8.45□□□□□ -1.06
LINC00517-202ENST00000554257 BRIP1Q9BX63 1249 aa8.45□□□□□ -1.06
LINC00517-202ENST00000554257 SOCS7O14512 581 aa8.45□□□□□ -1.06
LINC00517-202ENST00000554257 FGFR2P21802 821 aa8.45□□□□□ -1.06
LINC00517-202ENST00000554257 LRRC24Q50LG9 513 aa8.45□□□□□ -1.06
LINC00517-202ENST00000554257 RTL5Q5HYW3 569 aaPredicted RBP8.45□□□□□ -1.06
LINC00517-202ENST00000554257 SKAP1Q86WV1 359 aa8.45□□□□□ -1.06
LINC00517-202ENST00000554257 CCDC24Q8N4L8 307 aa8.45□□□□□ -1.06
LINC00517-202ENST00000554257 CNBD1Q8NA66 436 aa8.45□□□□□ -1.06
LINC00517-202ENST00000554257 ZNF594Q96JF6 807 aaPredicted RBP8.45□□□□□ -1.06
LINC00517-202ENST00000554257 PUS3Q9BZE2 481 aaKnown RBP8.45□□□□□ -1.06
LINC00517-202ENST00000554257 FBXO3Q9UK99 471 aa8.45□□□□□ -1.06
LINC00517-202ENST00000554257 SRGAP3O43295 1099 aa8.44□□□□□ -1.06
LINC00517-202ENST00000554257 ITGA6P23229 1130 aa8.44□□□□□ -1.06
LINC00517-202ENST00000554257 TPTE2Q6XPS3 522 aa8.44□□□□□ -1.06
LINC00517-202ENST00000554257 GCC1Q96CN9 775 aa8.44□□□□□ -1.06
LINC00517-202ENST00000554257 CELF1Q92879 486 aaKnown RBP8.44□□□□□ -1.06
LINC00517-202ENST00000554257 SRCAPQ6ZRS2 3230 aa8.44□□□□□ -1.06
LINC00517-202ENST00000554257 LAMB1P07942 1786 aa8.43□□□□□ -1.06
LINC00517-202ENST00000554257 PSDA5PKW4 1024 aaPredicted RBP8.43□□□□□ -1.06
LINC00517-202ENST00000554257 CRAMP1Q96RY5 1269 aa8.43□□□□□ -1.06
LINC00517-202ENST00000554257 NEFLP07196 543 aa8.43□□□□□ -1.06
LINC00517-202ENST00000554257 WTIPA6NIX2 430 aaPredicted RBP8.42□□□□□ -1.06
LINC00517-202ENST00000554257 ZBTB7AO95365 584 aa8.42□□□□□ -1.06
LINC00517-202ENST00000554257 RWDD1Q9H446 243 aaPredicted RBP8.42□□□□□ -1.06
LINC00517-202ENST00000554257 EXOC6BQ9Y2D4 811 aa8.42□□□□□ -1.06
LINC00517-202ENST00000554257 STYK1Q6J9G0 422 aa8.42□□□□□ -1.06
LINC00517-202ENST00000554257 BSDC1Q9NW68 430 aaPredicted RBP8.42□□□□□ -1.06
LINC00517-202ENST00000554257 PDZRN3Q9UPQ7 1066 aa8.42□□□□□ -1.06
LINC00517-202ENST00000554257 FAM177BA6PVY3 158 aa8.42□□□□□ -1.06
LINC00517-202ENST00000554257 EYA2O00167 538 aa8.42□□□□□ -1.06
LINC00517-202ENST00000554257 GRAPQ13588 217 aa8.42□□□□□ -1.06
LINC00517-202ENST00000554257 CCDC152Q4G0S7 254 aa8.42□□□□□ -1.06
LINC00517-202ENST00000554257 GRAPLQ8TC17 118 aaPredicted RBP8.42□□□□□ -1.06
LINC00517-202ENST00000554257 OTUD7AQ8TE49 926 aaPredicted RBP8.42□□□□□ -1.06
LINC00517-202ENST00000554257 OSBPL3Q9H4L5 887 aa8.42□□□□□ -1.06
LINC00517-202ENST00000554257 GPR108Q9NPR9 543 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms