RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 SETDB2Q96T68 719 aa13.4□□□□□ -0.26
PABPN1-203ENST00000553960 ABCC12Q96J65 1359 aa13.4□□□□□ -0.26
PABPN1-203ENST00000553960 GYS1P13807 737 aa13.39□□□□□ -0.27
PABPN1-203ENST00000553960 IFIT5Q13325 482 aaKnown RBP13.39□□□□□ -0.27
PABPN1-203ENST00000553960 NLGN1Q8N2Q7 840 aa13.39□□□□□ -0.27
PABPN1-203ENST00000553960 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.39□□□□□ -0.27
PABPN1-203ENST00000553960 ZNF330Q9Y3S2 320 aaPredicted RBP13.39□□□□□ -0.27
PABPN1-203ENST00000553960 RIPOR2Q9Y4F9 1068 aa13.39□□□□□ -0.27
PABPN1-203ENST00000553960 GLRX3O76003 335 aaKnown RBP13.38□□□□□ -0.27
PABPN1-203ENST00000553960 GPTP24298 496 aa13.38□□□□□ -0.27
PABPN1-203ENST00000553960 CCDC152Q4G0S7 254 aa13.38□□□□□ -0.27
PABPN1-203ENST00000553960 USPL1Q5W0Q7 1092 aa13.38□□□□□ -0.27
PABPN1-203ENST00000553960 TBC1D9BQ66K14 1250 aa13.38□□□□□ -0.27
PABPN1-203ENST00000553960 AMIGO3Q86WK7 504 aa13.38□□□□□ -0.27
PABPN1-203ENST00000553960 IL27Q8NEV9 243 aa13.38□□□□□ -0.27
PABPN1-203ENST00000553960 ZNF512BQ96KM6 892 aaPredicted RBP13.38□□□□□ -0.27
PABPN1-203ENST00000553960 SPEF2Q9C093 1822 aa13.38□□□□□ -0.27
PABPN1-203ENST00000553960 ANKRD18BA2A2Z9 1011 aa13.37□□□□□ -0.27
PABPN1-203ENST00000553960 ERC2O15083 957 aa13.37□□□□□ -0.27
PABPN1-203ENST00000553960 CRY2Q49AN0 593 aa13.37□□□□□ -0.27
PABPN1-203ENST00000553960 PI4K2BQ8TCG2 481 aa13.37□□□□□ -0.27
PABPN1-203ENST00000553960 AKAP2Q9Y2D5 859 aa13.37□□□□□ -0.27
PABPN1-203ENST00000553960 RFX7Q2KHR2 1363 aa13.36□□□□□ -0.27
PABPN1-203ENST00000553960 IGSF3O75054 1194 aa13.36□□□□□ -0.27
PABPN1-203ENST00000553960 KCNQ4P56696 695 aa13.36□□□□□ -0.27
PABPN1-203ENST00000553960 VGLL2Q8N8G2 317 aa13.36□□□□□ -0.27
PABPN1-203ENST00000553960 EAF2Q96CJ1 260 aaPredicted RBP13.36□□□□□ -0.27
PABPN1-203ENST00000553960 GPATCH3Q96I76 525 aa13.36□□□□□ -0.27
PABPN1-203ENST00000553960 ECHDC1Q9NTX5 307 aa13.36□□□□□ -0.27
PABPN1-203ENST00000553960 PA2G4Q9UQ80 394 aaKnown RBP13.36□□□□□ -0.27
PABPN1-203ENST00000553960 MROH5Q6ZUA9 1318 aa13.36□□□□□ -0.27
PABPN1-203ENST00000553960 CASZ1Q86V15 1759 aa13.35□□□□□ -0.27
PABPN1-203ENST00000553960 GSPT1P15170 499 aaKnown RBP13.35□□□□□ -0.27
PABPN1-203ENST00000553960 ATP5JP18859 108 aa13.35□□□□□ -0.27
PABPN1-203ENST00000553960 ITGA6P23229 1130 aa13.35□□□□□ -0.27
PABPN1-203ENST00000553960 NFIXQ14938 502 aa13.35□□□□□ -0.27
PABPN1-203ENST00000553960 TNNI3KQ59H18 835 aa13.35□□□□□ -0.27
PABPN1-203ENST00000553960 C16orf71Q8IYS4 520 aaPredicted RBP13.35□□□□□ -0.27
PABPN1-203ENST00000553960 CDC5LQ99459 802 aaKnown RBP13.35□□□□□ -0.27
PABPN1-203ENST00000553960 FPGT-TNNI3KV9GXZ4 949 aa13.35□□□□□ -0.27
PABPN1-203ENST00000553960 ARAP2Q8WZ64 1704 aa13.34□□□□□ -0.27
PABPN1-203ENST00000553960 ZNF609O15014 1411 aa13.34□□□□□ -0.27
PABPN1-203ENST00000553960 HOXA10P31260 410 aaPredicted RBP13.34□□□□□ -0.27
PABPN1-203ENST00000553960 BAG6P46379 1132 aa13.34□□□□□ -0.27
PABPN1-203ENST00000553960 OS9Q13438 667 aaPredicted RBP13.34□□□□□ -0.27
PABPN1-203ENST00000553960 SKAP1Q86WV1 359 aa13.34□□□□□ -0.27
PABPN1-203ENST00000553960 SYNE4Q8N205 404 aa13.34□□□□□ -0.27
PABPN1-203ENST00000553960 SLC16A10Q8TF71 515 aa13.34□□□□□ -0.27
PABPN1-203ENST00000553960 ARXQ96QS3 562 aa13.34□□□□□ -0.27
PABPN1-203ENST00000553960 GREM2Q9H772 168 aa13.34□□□□□ -0.27
PABPN1-203ENST00000553960 BSDC1Q9NW68 430 aaPredicted RBP13.34□□□□□ -0.27
PABPN1-203ENST00000553960 CEP126Q9P2H0 1117 aa13.34□□□□□ -0.27
PABPN1-203ENST00000553960 SRP68Q9UHB9 627 aaKnown RBP13.34□□□□□ -0.27
PABPN1-203ENST00000553960 SMARCA5O60264 1052 aaPredicted RBP13.33□□□□□ -0.28
PABPN1-203ENST00000553960 CDC45O75419 566 aa13.33□□□□□ -0.28
PABPN1-203ENST00000553960 FGFR2P21802 821 aa13.33□□□□□ -0.28
PABPN1-203ENST00000553960 SLC15A2Q16348 729 aa13.33□□□□□ -0.28
PABPN1-203ENST00000553960 ZNF827Q17R98 1081 aa13.33□□□□□ -0.28
PABPN1-203ENST00000553960 NBPF5PQ86XG9 351 aaPredicted RBP13.33□□□□□ -0.28
PABPN1-203ENST00000553960 OTUD7AQ8TE49 926 aaPredicted RBP13.33□□□□□ -0.28
PABPN1-203ENST00000553960 IL17RAQ96F46 866 aa13.33□□□□□ -0.28
PABPN1-203ENST00000553960 NLRP3Q96P20 1036 aa13.33□□□□□ -0.28
PABPN1-203ENST00000553960 SNRKQ9NRH2 765 aa13.33□□□□□ -0.28
PABPN1-203ENST00000553960 PNPLA7Q6ZV29 1317 aa13.33□□□□□ -0.28
PABPN1-203ENST00000553960 PDE8BO95263 885 aa13.32□□□□□ -0.28
PABPN1-203ENST00000553960 IFIT2P09913 472 aaKnown RBP13.32□□□□□ -0.28
PABPN1-203ENST00000553960 SDSP20132 328 aa13.32□□□□□ -0.28
PABPN1-203ENST00000553960 ERFEQ4G0M1 354 aa13.32□□□□□ -0.28
PABPN1-203ENST00000553960 LDHAL6AQ6ZMR3 332 aa13.32□□□□□ -0.28
PABPN1-203ENST00000553960 TMC4Q7Z404 712 aa13.32□□□□□ -0.28
PABPN1-203ENST00000553960 JARID2Q92833 1246 aaPredicted RBP13.32□□□□□ -0.28
PABPN1-203ENST00000553960 IL1RAPL2Q9NP60 686 aa13.32□□□□□ -0.28
PABPN1-203ENST00000553960 POLRMTO00411 1230 aaKnown RBP13.31□□□□□ -0.28
PABPN1-203ENST00000553960 TFCP2Q12800 502 aa13.31□□□□□ -0.28
PABPN1-203ENST00000553960 TMED8Q6PL24 325 aaPredicted RBP13.31□□□□□ -0.28
PABPN1-203ENST00000553960 COL23A1Q86Y22 540 aaPredicted RBP13.31□□□□□ -0.28
PABPN1-203ENST00000553960 TFCP2L1Q9NZI6 479 aa13.31□□□□□ -0.28
PABPN1-203ENST00000553960 DBNLQ9UJU6 430 aaKnown RBP13.31□□□□□ -0.28
PABPN1-203ENST00000553960 RBM19Q9Y4C8 960 aaKnown RBP13.31□□□□□ -0.28
PABPN1-203ENST00000553960 A0A1B0GUL6 1792 aa13.3□□□□□ -0.28
PABPN1-203ENST00000553960 HCLS1P14317 486 aaPredicted RBP13.3□□□□□ -0.28
PABPN1-203ENST00000553960 LRRC24Q50LG9 513 aa13.3□□□□□ -0.28
PABPN1-203ENST00000553960 PRR5LQ6MZQ0 368 aa13.3□□□□□ -0.28
PABPN1-203ENST00000553960 AACSQ86V21 672 aa13.3□□□□□ -0.28
PABPN1-203ENST00000553960 CNBD1Q8NA66 436 aa13.3□□□□□ -0.28
PABPN1-203ENST00000553960 KLHDC4Q8TBB5 520 aa13.3□□□□□ -0.28
PABPN1-203ENST00000553960 EVI5LQ96CN4 794 aa13.3□□□□□ -0.28
PABPN1-203ENST00000553960 CRAMP1Q96RY5 1269 aa13.3□□□□□ -0.28
PABPN1-203ENST00000553960 AK9Q5TCS8 1911 aa13.3□□□□□ -0.28
PABPN1-203ENST00000553960 HIP1O00291 1037 aa13.29□□□□□ -0.28
PABPN1-203ENST00000553960 SERPINB2P05120 415 aa13.29□□□□□ -0.28
PABPN1-203ENST00000553960 RBM25P49756 843 aaKnown RBP13.29□□□□□ -0.28
PABPN1-203ENST00000553960 SF3B2Q13435 895 aaKnown RBP13.29□□□□□ -0.28
PABPN1-203ENST00000553960 UBE4AQ14139 1066 aa13.29□□□□□ -0.28
PABPN1-203ENST00000553960 TBC1D9Q6ZT07 1266 aa13.29□□□□□ -0.28
PABPN1-203ENST00000553960 C15orf52Q6ZUT6 534 aaKnown RBP13.29□□□□□ -0.28
PABPN1-203ENST00000553960 LPIN2Q92539 896 aa13.29□□□□□ -0.28
PABPN1-203ENST00000553960 HAUS7Q99871 368 aa13.29□□□□□ -0.28
PABPN1-203ENST00000553960 BRIP1Q9BX63 1249 aa13.29□□□□□ -0.28
PABPN1-203ENST00000553960 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms