RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 RPS6KB1P23443 525 aa17.36■□□□□ 0.37
ACTN1-211ENST00000553882 RFX5P48382 616 aaPredicted RBP17.36■□□□□ 0.37
ACTN1-211ENST00000553882 DBNDD2Q9BQY9 259 aa17.36■□□□□ 0.37
ACTN1-211ENST00000553882 CABP4P57796 275 aa17.35■□□□□ 0.37
ACTN1-211ENST00000553882 PLCB2Q00722 1185 aa17.35■□□□□ 0.37
ACTN1-211ENST00000553882 TOB2Q14106 344 aaPredicted RBP17.35■□□□□ 0.37
ACTN1-211ENST00000553882 SNRKQ9NRH2 765 aa17.35■□□□□ 0.37
ACTN1-211ENST00000553882 COL15A1P39059 1388 aa17.35■□□□□ 0.37
ACTN1-211ENST00000553882 DDX46Q7L014 1031 aaKnown RBP17.35■□□□□ 0.37
ACTN1-211ENST00000553882 FAM184AQ8NB25 1140 aa17.34■□□□□ 0.37
ACTN1-211ENST00000553882 ATP5JP18859 108 aa17.34■□□□□ 0.37
ACTN1-211ENST00000553882 ZNF830Q96NB3 372 aaPredicted RBP17.34■□□□□ 0.37
ACTN1-211ENST00000553882 CSPP1Q1MSJ5 1256 aa17.34■□□□□ 0.37
ACTN1-211ENST00000553882 LMBR1LQ6UX01 489 aa17.34■□□□□ 0.37
ACTN1-211ENST00000553882 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.34■□□□□ 0.37
ACTN1-211ENST00000553882 SLFNL1Q499Z3 407 aa17.33■□□□□ 0.36
ACTN1-211ENST00000553882 TTC6Q86TZ1 520 aa17.33■□□□□ 0.36
ACTN1-211ENST00000553882 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.33■□□□□ 0.36
ACTN1-211ENST00000553882 ALS2Q96Q42 1657 aa17.33■□□□□ 0.36
ACTN1-211ENST00000553882 TMEM94Q12767 1356 aa17.32■□□□□ 0.36
ACTN1-211ENST00000553882 KIF1AQ12756 1690 aa17.32■□□□□ 0.36
ACTN1-211ENST00000553882 LETM1O95202 739 aaPredicted RBP17.32■□□□□ 0.36
ACTN1-211ENST00000553882 ADCY5O95622 1261 aa17.32■□□□□ 0.36
ACTN1-211ENST00000553882 TPM2P07951 284 aa17.32■□□□□ 0.36
ACTN1-211ENST00000553882 ANKRD1Q15327 319 aa17.32■□□□□ 0.36
ACTN1-211ENST00000553882 LRRC2Q9BYS8 371 aa17.32■□□□□ 0.36
ACTN1-211ENST00000553882 LMTK3Q96Q04 1460 aa17.32■□□□□ 0.36
ACTN1-211ENST00000553882 ADAMTSL3P82987 1691 aa17.32■□□□□ 0.36
ACTN1-211ENST00000553882 KRT85P78386 507 aa17.32■□□□□ 0.36
ACTN1-211ENST00000553882 HSP90AA2PQ14568 343 aaPredicted RBP17.32■□□□□ 0.36
ACTN1-211ENST00000553882 RABL6Q3YEC7 729 aaPredicted RBP17.32■□□□□ 0.36
ACTN1-211ENST00000553882 HMG20BQ9P0W2 317 aa17.32■□□□□ 0.36
ACTN1-211ENST00000553882 TFIP11Q9UBB9 837 aaKnown RBP17.32■□□□□ 0.36
ACTN1-211ENST00000553882 MRC1P22897 1456 aa17.31■□□□□ 0.36
ACTN1-211ENST00000553882 ZNF609O15014 1411 aa17.31■□□□□ 0.36
ACTN1-211ENST00000553882 CAMK4Q16566 473 aa17.31■□□□□ 0.36
ACTN1-211ENST00000553882 NEUROD6Q96NK8 337 aa17.31■□□□□ 0.36
ACTN1-211ENST00000553882 AFDNP55196 1824 aaKnown RBP17.31■□□□□ 0.36
ACTN1-211ENST00000553882 JAK2O60674 1132 aa17.31■□□□□ 0.36
ACTN1-211ENST00000553882 MCM5P33992 734 aa17.31■□□□□ 0.36
ACTN1-211ENST00000553882 MST1RQ04912 1400 aa17.31■□□□□ 0.36
ACTN1-211ENST00000553882 PDCP20941 246 aa17.3■□□□□ 0.36
ACTN1-211ENST00000553882 NEK1Q96PY6 1258 aa17.3■□□□□ 0.36
ACTN1-211ENST00000553882 FUCA2Q9BTY2 467 aa17.3■□□□□ 0.36
ACTN1-211ENST00000553882 PODXL2Q9NZ53 605 aa17.3■□□□□ 0.36
ACTN1-211ENST00000553882 NBPF26B4DH59 902 aa17.3■□□□□ 0.36
ACTN1-211ENST00000553882 CYP21A2P08686 494 aa17.3■□□□□ 0.36
ACTN1-211ENST00000553882 UVSSAQ2YD98 709 aa17.3■□□□□ 0.36
ACTN1-211ENST00000553882 NBPF14Q5TI25 921 aa17.3■□□□□ 0.36
ACTN1-211ENST00000553882 NBPF10Q6P3W6 841 aaKnown RBP17.3■□□□□ 0.36
ACTN1-211ENST00000553882 TTLL7Q6ZT98 887 aa17.3■□□□□ 0.36
ACTN1-211ENST00000553882 NBPF15Q8N660 670 aa17.3■□□□□ 0.36
ACTN1-211ENST00000553882 PLBD2Q8NHP8 589 aa17.3■□□□□ 0.36
ACTN1-211ENST00000553882 HSP90B1P14625 803 aaKnown RBP17.29■□□□□ 0.36
ACTN1-211ENST00000553882 LIG1P18858 919 aa17.29■□□□□ 0.36
ACTN1-211ENST00000553882 CASP7P55210 303 aa17.29■□□□□ 0.36
ACTN1-211ENST00000553882 TTC12Q9H892 705 aaPredicted RBP17.29■□□□□ 0.36
ACTN1-211ENST00000553882 JCADQ9P266 1359 aa17.29■□□□□ 0.36
ACTN1-211ENST00000553882 TIMM10P62072 90 aa17.29■□□□□ 0.36
ACTN1-211ENST00000553882 USPL1Q5W0Q7 1092 aa17.29■□□□□ 0.36
ACTN1-211ENST00000553882 Q6ZUG5 572 aa17.29■□□□□ 0.36
ACTN1-211ENST00000553882 DDX11Q96FC9 970 aa17.29■□□□□ 0.36
ACTN1-211ENST00000553882 HAUS7Q99871 368 aa17.29■□□□□ 0.36
ACTN1-211ENST00000553882 GOLIM4O00461 696 aa17.28■□□□□ 0.36
ACTN1-211ENST00000553882 MCMDC2Q4G0Z9 681 aa17.28■□□□□ 0.36
ACTN1-211ENST00000553882 ZBTB3Q9H5J0 574 aa17.28■□□□□ 0.36
ACTN1-211ENST00000553882 FGD1P98174 961 aa17.28■□□□□ 0.36
ACTN1-211ENST00000553882 TSGA10IPQ3SY00 556 aa17.28■□□□□ 0.36
ACTN1-211ENST00000553882 KDM4AO75164 1064 aa17.27■□□□□ 0.36
ACTN1-211ENST00000553882 A1BGP04217 495 aa17.27■□□□□ 0.36
ACTN1-211ENST00000553882 KIAA2012Q0VF49 1180 aa17.27■□□□□ 0.36
ACTN1-211ENST00000553882 KRT32Q14532 448 aa17.27■□□□□ 0.36
ACTN1-211ENST00000553882 ARFGEF2Q9Y6D5 1785 aa17.27■□□□□ 0.36
ACTN1-211ENST00000553882 FOXO4P98177 505 aa17.27■□□□□ 0.35
ACTN1-211ENST00000553882 BRF1Q92994 677 aa17.27■□□□□ 0.35
ACTN1-211ENST00000553882 ZNF594Q96JF6 807 aaPredicted RBP17.27■□□□□ 0.35
ACTN1-211ENST00000553882 SPATA32Q96LK8 384 aa17.27■□□□□ 0.35
ACTN1-211ENST00000553882 COL18A1P39060 1754 aa17.26■□□□□ 0.35
ACTN1-211ENST00000553882 GOLGA6L4A6NEF3 574 aa17.26■□□□□ 0.35
ACTN1-211ENST00000553882 AP5Z1O43299 807 aa17.26■□□□□ 0.35
ACTN1-211ENST00000553882 PPFIA3O75145 1194 aa17.26■□□□□ 0.35
ACTN1-211ENST00000553882 FOSBP53539 338 aa17.26■□□□□ 0.35
ACTN1-211ENST00000553882 CKAP2LQ8IYA6 745 aa17.26■□□□□ 0.35
ACTN1-211ENST00000553882 C17orf53Q8N3J3 647 aaPredicted RBP17.26■□□□□ 0.35
ACTN1-211ENST00000553882 GTF3C6Q969F1 213 aa17.26■□□□□ 0.35
ACTN1-211ENST00000553882 RBM10P98175 930 aaKnown RBP17.26■□□□□ 0.35
ACTN1-211ENST00000553882 KBTBD3Q8NAB2 608 aa17.26■□□□□ 0.35
ACTN1-211ENST00000553882 DACT1Q9NYF0 836 aa17.26■□□□□ 0.35
ACTN1-211ENST00000553882 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
ACTN1-211ENST00000553882 RRP9O43818 475 aaKnown RBP17.25■□□□□ 0.35
ACTN1-211ENST00000553882 LRRC24Q50LG9 513 aa17.25■□□□□ 0.35
ACTN1-211ENST00000553882 STOX1Q6ZVD7 989 aa17.25■□□□□ 0.35
ACTN1-211ENST00000553882 ATG9AQ7Z3C6 839 aa17.25■□□□□ 0.35
ACTN1-211ENST00000553882 NUP62CLQ9H1M0 184 aa17.25■□□□□ 0.35
ACTN1-211ENST00000553882 ALDH8A1Q9H2A2 487 aaPredicted RBP17.25■□□□□ 0.35
ACTN1-211ENST00000553882 ZNF330Q9Y3S2 320 aaPredicted RBP17.25■□□□□ 0.35
ACTN1-211ENST00000553882 TNS3Q68CZ2 1445 aa17.25■□□□□ 0.35
ACTN1-211ENST00000553882 A0A0G2JLW4 131 aa17.25■□□□□ 0.35
ACTN1-211ENST00000553882 CCDC192P0DO97 292 aa17.25■□□□□ 0.35
ACTN1-211ENST00000553882 CWC25Q9NXE8 425 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms