RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 OSBPL3Q9H4L5 887 aa22.87■■□□□ 1.25
LRP1-204ENST00000553277 QSER1Q2KHR3 1735 aa22.87■■□□□ 1.25
LRP1-204ENST00000553277 RFX5P48382 616 aaPredicted RBP22.87■■□□□ 1.25
LRP1-204ENST00000553277 SETDB2Q96T68 719 aa22.87■■□□□ 1.25
LRP1-204ENST00000553277 KIF2CQ99661 725 aa22.87■■□□□ 1.25
LRP1-204ENST00000553277 CIZ1Q9ULV3 898 aaPredicted RBP22.87■■□□□ 1.25
LRP1-204ENST00000553277 HSP90B1P14625 803 aaKnown RBP22.86■■□□□ 1.25
LRP1-204ENST00000553277 DDIT3P35638 169 aa22.86■■□□□ 1.25
LRP1-204ENST00000553277 LMBR1LQ6UX01 489 aa22.86■■□□□ 1.25
LRP1-204ENST00000553277 SYNE4Q8N205 404 aa22.86■■□□□ 1.25
LRP1-204ENST00000553277 MYH3P11055 1940 aa22.85■■□□□ 1.25
LRP1-204ENST00000553277 IRS4O14654 1257 aaPredicted RBP22.85■■□□□ 1.25
LRP1-204ENST00000553277 SLC10A5Q5PT55 438 aa22.85■■□□□ 1.25
LRP1-204ENST00000553277 COPRSQ9NQ92 184 aa22.85■■□□□ 1.25
LRP1-204ENST00000553277 PDE8AO60658 829 aa22.84■■□□□ 1.25
LRP1-204ENST00000553277 RAB11FIP3O75154 756 aa22.84■■□□□ 1.25
LRP1-204ENST00000553277 SLC15A2Q16348 729 aa22.84■■□□□ 1.25
LRP1-204ENST00000553277 DEFB132Q7Z7B7 95 aa22.84■■□□□ 1.25
LRP1-204ENST00000553277 COL23A1Q86Y22 540 aaPredicted RBP22.84■■□□□ 1.25
LRP1-204ENST00000553277 LAMB2P55268 1798 aa22.84■■□□□ 1.25
LRP1-204ENST00000553277 TM4SF1P30408 202 aa22.84■■□□□ 1.25
LRP1-204ENST00000553277 HSP90AB4PQ58FF6 505 aa22.84■■□□□ 1.25
LRP1-204ENST00000553277 NYXQ9GZU5 481 aa22.84■■□□□ 1.25
LRP1-204ENST00000553277 PNPLA7Q6ZV29 1317 aa22.83■■□□□ 1.25
LRP1-204ENST00000553277 NFIXQ14938 502 aa22.83■■□□□ 1.24
LRP1-204ENST00000553277 CASC1Q6TDU7 716 aa22.83■■□□□ 1.24
LRP1-204ENST00000553277 TTLL11Q8NHH1 800 aa22.83■■□□□ 1.24
LRP1-204ENST00000553277 ANO8Q9HCE9 1232 aaPredicted RBP22.83■■□□□ 1.24
LRP1-204ENST00000553277 CTSWP56202 376 aa22.82■■□□□ 1.24
LRP1-204ENST00000553277 PTPN12Q05209 780 aaKnown RBP22.82■■□□□ 1.24
LRP1-204ENST00000553277 EXOC6BQ9Y2D4 811 aa22.82■■□□□ 1.24
LRP1-204ENST00000553277 DDX60Q8IY21 1712 aaKnown RBP22.82■■□□□ 1.24
LRP1-204ENST00000553277 CARMIL3Q8ND23 1372 aa22.82■■□□□ 1.24
LRP1-204ENST00000553277 SURF6O75683 361 aaKnown RBP22.81■■□□□ 1.24
LRP1-204ENST00000553277 TPTE2Q6XPS3 522 aa22.81■■□□□ 1.24
LRP1-204ENST00000553277 RTL9Q8NET4 1388 aa22.8■■□□□ 1.24
LRP1-204ENST00000553277 NLGN1Q8N2Q7 840 aa22.8■■□□□ 1.24
LRP1-204ENST00000553277 STK32BQ9NY57 414 aa22.8■■□□□ 1.24
LRP1-204ENST00000553277 LRRCC1Q9C099 1032 aa22.79■■□□□ 1.24
LRP1-204ENST00000553277 FBXO3Q9UK99 471 aa22.79■■□□□ 1.24
LRP1-204ENST00000553277 RABEP1Q15276 862 aa22.78■■□□□ 1.24
LRP1-204ENST00000553277 BICDL1Q6ZP65 573 aa22.78■■□□□ 1.24
LRP1-204ENST00000553277 NBPF5PQ86XG9 351 aaPredicted RBP22.78■■□□□ 1.24
LRP1-204ENST00000553277 ERC1Q8IUD2 1116 aa22.78■■□□□ 1.24
LRP1-204ENST00000553277 C16orf71Q8IYS4 520 aaPredicted RBP22.78■■□□□ 1.24
LRP1-204ENST00000553277 KIF1BPQ96EK5 621 aa22.78■■□□□ 1.24
LRP1-204ENST00000553277 PA2G4Q9UQ80 394 aaKnown RBP22.78■■□□□ 1.24
LRP1-204ENST00000553277 RIC1Q4ADV7 1423 aa22.78■■□□□ 1.24
LRP1-204ENST00000553277 HCLS1P14317 486 aaPredicted RBP22.77■■□□□ 1.24
LRP1-204ENST00000553277 MCM4P33991 863 aa22.77■■□□□ 1.24
LRP1-204ENST00000553277 NUTM1Q86Y26 1132 aa22.77■■□□□ 1.24
LRP1-204ENST00000553277 SDSP20132 328 aa22.77■■□□□ 1.24
LRP1-204ENST00000553277 SF3B3Q15393 1217 aaKnown RBP22.77■■□□□ 1.24
LRP1-204ENST00000553277 ERFEQ4G0M1 354 aa22.77■■□□□ 1.24
LRP1-204ENST00000553277 RHPN1Q8TCX5 695 aa22.77■■□□□ 1.24
LRP1-204ENST00000553277 K7ELQ4 463 aaPredicted RBP22.76■■□□□ 1.23
LRP1-204ENST00000553277 USP26Q9BXU7 913 aa22.76■■□□□ 1.23
LRP1-204ENST00000553277 SALL3Q9BXA9 1300 aa22.76■■□□□ 1.23
LRP1-204ENST00000553277 FAM177BA6PVY3 158 aa22.75■■□□□ 1.23
LRP1-204ENST00000553277 CIAO1O76071 339 aa22.75■■□□□ 1.23
LRP1-204ENST00000553277 CCDC57Q2TAC2 916 aa22.75■■□□□ 1.23
LRP1-204ENST00000553277 UPF1Q92900 1129 aaKnown RBP eCLIP22.75■■□□□ 1.23
LRP1-204ENST00000553277 REC8O95072 547 aa22.74■■□□□ 1.23
LRP1-204ENST00000553277 PDE1AP54750 535 aa22.74■■□□□ 1.23
LRP1-204ENST00000553277 G3BP1Q13283 466 aaKnown RBP eCLIP22.74■■□□□ 1.23
LRP1-204ENST00000553277 IFIT5Q13325 482 aaKnown RBP22.74■■□□□ 1.23
LRP1-204ENST00000553277 GREM2Q9H772 168 aa22.74■■□□□ 1.23
LRP1-204ENST00000553277 AOX1Q06278 1338 aa22.74■■□□□ 1.23
LRP1-204ENST00000553277 ABCC12Q96J65 1359 aa22.74■■□□□ 1.23
LRP1-204ENST00000553277 POLRMTO00411 1230 aaKnown RBP22.74■■□□□ 1.23
LRP1-204ENST00000553277 SASH1O94885 1247 aa22.74■■□□□ 1.23
LRP1-204ENST00000553277 DDR1Q08345 913 aa22.74■■□□□ 1.23
LRP1-204ENST00000553277 KLHDC4Q8TBB5 520 aa22.74■■□□□ 1.23
LRP1-204ENST00000553277 OTUD7AQ8TE49 926 aaPredicted RBP22.74■■□□□ 1.23
LRP1-204ENST00000553277 NRXN2Q9P2S2 1712 aa22.74■■□□□ 1.23
LRP1-204ENST00000553277 DDX11L8A8MPP1 907 aa22.73■■□□□ 1.23
LRP1-204ENST00000553277 ITGA6P23229 1130 aa22.73■■□□□ 1.23
LRP1-204ENST00000553277 CCDC152Q4G0S7 254 aa22.73■■□□□ 1.23
LRP1-204ENST00000553277 STAP2Q9UGK3 403 aa22.73■■□□□ 1.23
LRP1-204ENST00000553277 CHMP3Q9Y3E7 222 aa22.73■■□□□ 1.23
LRP1-204ENST00000553277 SMARCA5O60264 1052 aaPredicted RBP22.72■■□□□ 1.23
LRP1-204ENST00000553277 SERPINB2P05120 415 aa22.72■■□□□ 1.23
LRP1-204ENST00000553277 PTMSP20962 102 aa22.72■■□□□ 1.23
LRP1-204ENST00000553277 ATG9AQ7Z3C6 839 aa22.72■■□□□ 1.23
LRP1-204ENST00000553277 EYA2O00167 538 aa22.71■■□□□ 1.23
LRP1-204ENST00000553277 GTF2E1P29083 439 aaPredicted RBP22.71■■□□□ 1.23
LRP1-204ENST00000553277 PRR5LQ6MZQ0 368 aa22.71■■□□□ 1.23
LRP1-204ENST00000553277 CNBD1Q8NA66 436 aa22.71■■□□□ 1.23
LRP1-204ENST00000553277 IL27Q8NEV9 243 aa22.71■■□□□ 1.23
LRP1-204ENST00000553277 LRP5O75197 1615 aa22.71■■□□□ 1.23
LRP1-204ENST00000553277 ANKRD18BA2A2Z9 1011 aa22.71■■□□□ 1.23
LRP1-204ENST00000553277 APBB1O00213 710 aa22.7■■□□□ 1.22
LRP1-204ENST00000553277 IL15P40933 162 aaPredicted RBP22.7■■□□□ 1.22
LRP1-204ENST00000553277 NLRP3Q96P20 1036 aa22.7■■□□□ 1.22
LRP1-204ENST00000553277 CASZ1Q86V15 1759 aa22.7■■□□□ 1.22
LRP1-204ENST00000553277 KLRG2A4D1S0 409 aaPredicted RBP22.69■■□□□ 1.22
LRP1-204ENST00000553277 ERC2O15083 957 aa22.69■■□□□ 1.22
LRP1-204ENST00000553277 OS9Q13438 667 aaPredicted RBP22.69■■□□□ 1.22
LRP1-204ENST00000553277 C3orf67Q6ZVT6 689 aa22.69■■□□□ 1.22
LRP1-204ENST00000553277 SPRYD3Q8NCJ5 442 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms