RNA–Protein interactions for RNA: ENST00000553020.5

CNOT2-242, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-242ENST00000553020 ABHD8Q96I13 439 aa12.34□□□□□ -0.43
CNOT2-242ENST00000553020 FSD1Q9BTV5 496 aa12.34□□□□□ -0.43
CNOT2-242ENST00000553020 COPRSQ9NQ92 184 aa12.34□□□□□ -0.43
CNOT2-242ENST00000553020 THRAP3Q9Y2W1 955 aaKnown RBP12.34□□□□□ -0.43
CNOT2-242ENST00000553020 MAP4K4O95819 1239 aaPredicted RBP12.33□□□□□ -0.44
CNOT2-242ENST00000553020 ZKSCAN1P17029 563 aaPredicted RBP12.33□□□□□ -0.44
CNOT2-242ENST00000553020 NEK4P51957 841 aa12.33□□□□□ -0.44
CNOT2-242ENST00000553020 LRRFIP1Q32MZ4 808 aaKnown RBP12.33□□□□□ -0.44
CNOT2-242ENST00000553020 RABL6Q3YEC7 729 aaPredicted RBP12.33□□□□□ -0.44
CNOT2-242ENST00000553020 TAF7LQ5H9L4 462 aa12.33□□□□□ -0.44
CNOT2-242ENST00000553020 RNF20Q5VTR2 975 aa12.33□□□□□ -0.44
CNOT2-242ENST00000553020 FOXD4L1Q9NU39 408 aa12.33□□□□□ -0.44
CNOT2-242ENST00000553020 ZNF330Q9Y3S2 320 aaPredicted RBP12.33□□□□□ -0.44
CNOT2-242ENST00000553020 ATP5J2-PTCD1G3V325 749 aa12.32□□□□□ -0.44
CNOT2-242ENST00000553020 PIP4K2AP48426 406 aaPredicted RBP12.32□□□□□ -0.44
CNOT2-242ENST00000553020 LRP10Q7Z4F1 713 aa12.32□□□□□ -0.44
CNOT2-242ENST00000553020 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
CNOT2-242ENST00000553020 ZBTB3Q9H5J0 574 aa12.32□□□□□ -0.44
CNOT2-242ENST00000553020 RGPD3A6NKT7 1758 aaPredicted RBP12.31□□□□□ -0.44
CNOT2-242ENST00000553020 RGPD4Q7Z3J3 1758 aa12.31□□□□□ -0.44
CNOT2-242ENST00000553020 PLSCR1O15162 318 aa12.31□□□□□ -0.44
CNOT2-242ENST00000553020 HSPA4P34932 840 aa12.31□□□□□ -0.44
CNOT2-242ENST00000553020 SLC15A2Q16348 729 aa12.31□□□□□ -0.44
CNOT2-242ENST00000553020 CWC27Q6UX04 472 aaKnown RBP12.31□□□□□ -0.44
CNOT2-242ENST00000553020 CCDC8Q9H0W5 538 aaPredicted RBP12.31□□□□□ -0.44
CNOT2-242ENST00000553020 WNK3Q9BYP7 1800 aa12.31□□□□□ -0.44
CNOT2-242ENST00000553020 TNRC18O15417 2968 aaPredicted RBP12.3□□□□□ -0.44
CNOT2-242ENST00000553020 H7C1W4 665 aa12.3□□□□□ -0.44
CNOT2-242ENST00000553020 A1BGP04217 495 aa12.3□□□□□ -0.44
CNOT2-242ENST00000553020 PSMA5P28066 241 aa12.3□□□□□ -0.44
CNOT2-242ENST00000553020 DDIT3P35638 169 aa12.3□□□□□ -0.44
CNOT2-242ENST00000553020 IL15P40933 162 aaPredicted RBP12.3□□□□□ -0.44
CNOT2-242ENST00000553020 TNNI3KQ59H18 835 aa12.3□□□□□ -0.44
CNOT2-242ENST00000553020 LMBR1LQ6UX01 489 aa12.3□□□□□ -0.44
CNOT2-242ENST00000553020 TNPO1Q92973 898 aaKnown RBP12.3□□□□□ -0.44
CNOT2-242ENST00000553020 ATG3Q9NT62 314 aa12.3□□□□□ -0.44
CNOT2-242ENST00000553020 FBXO3Q9UK99 471 aa12.3□□□□□ -0.44
CNOT2-242ENST00000553020 ISY1Q9ULR0 285 aaKnown RBP12.3□□□□□ -0.44
CNOT2-242ENST00000553020 FPGT-TNNI3KV9GXZ4 949 aa12.3□□□□□ -0.44
CNOT2-242ENST00000553020 TOGARAM1Q9Y4F4 1720 aa12.3□□□□□ -0.44
CNOT2-242ENST00000553020 NBPF26B4DH59 902 aa12.29□□□□□ -0.44
CNOT2-242ENST00000553020 SASH1O94885 1247 aa12.29□□□□□ -0.44
CNOT2-242ENST00000553020 CD2BP2O95400 341 aaKnown RBP12.29□□□□□ -0.44
CNOT2-242ENST00000553020 HSP90B1P14625 803 aaKnown RBP12.29□□□□□ -0.44
CNOT2-242ENST00000553020 CCDC57Q2TAC2 916 aa12.29□□□□□ -0.44
CNOT2-242ENST00000553020 NBPF10Q6P3W6 841 aaKnown RBP12.29□□□□□ -0.44
CNOT2-242ENST00000553020 TTLL7Q6ZT98 887 aa12.29□□□□□ -0.44
CNOT2-242ENST00000553020 TICAM2Q86XR7 235 aa12.29□□□□□ -0.44
CNOT2-242ENST00000553020 NBPF15Q8N660 670 aa12.29□□□□□ -0.44
CNOT2-242ENST00000553020 SYTL4Q96C24 671 aaPredicted RBP12.29□□□□□ -0.44
CNOT2-242ENST00000553020 IL17RAQ96F46 866 aa12.29□□□□□ -0.44
CNOT2-242ENST00000553020 INTS4Q96HW7 963 aaKnown RBP12.29□□□□□ -0.44
CNOT2-242ENST00000553020 KAZALD1Q96I82 304 aa12.29□□□□□ -0.44
CNOT2-242ENST00000553020 GPR108Q9NPR9 543 aa12.29□□□□□ -0.44
CNOT2-242ENST00000553020 PRDM10Q9NQV6 1147 aa12.29□□□□□ -0.44
CNOT2-242ENST00000553020 AKAP2Q9Y2D5 859 aa12.29□□□□□ -0.44
CNOT2-242ENST00000553020 TRAK2O60296 914 aa12.28□□□□□ -0.44
CNOT2-242ENST00000553020 CIAO1O76071 339 aa12.28□□□□□ -0.44
CNOT2-242ENST00000553020 ATP5JP18859 108 aa12.28□□□□□ -0.44
CNOT2-242ENST00000553020 PTPN12Q05209 780 aaKnown RBP12.28□□□□□ -0.44
CNOT2-242ENST00000553020 TCIRG1Q13488 830 aa12.28□□□□□ -0.44
CNOT2-242ENST00000553020 DDB1Q16531 1140 aa12.28□□□□□ -0.44
CNOT2-242ENST00000553020 RBM46Q8TBY0 533 aaKnown RBP12.28□□□□□ -0.44
CNOT2-242ENST00000553020 PIGBQ92521 554 aa12.28□□□□□ -0.44
CNOT2-242ENST00000553020 EAF2Q96CJ1 260 aaPredicted RBP12.28□□□□□ -0.44
CNOT2-242ENST00000553020 BOLA2Q9H3K6 86 aa12.28□□□□□ -0.44
CNOT2-242ENST00000553020 HMG20BQ9P0W2 317 aa12.28□□□□□ -0.44
CNOT2-242ENST00000553020 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.28□□□□□ -0.44
CNOT2-242ENST00000553020 CCDC171Q6TFL3 1326 aa12.28□□□□□ -0.44
CNOT2-242ENST00000553020 MAP3K15Q6ZN16 1313 aa12.28□□□□□ -0.44
CNOT2-242ENST00000553020 BCL9O00512 1426 aa12.28□□□□□ -0.44
CNOT2-242ENST00000553020 CCDC85CA6NKD9 419 aa12.27□□□□□ -0.45
CNOT2-242ENST00000553020 PCCAP05165 728 aaPredicted RBP12.27□□□□□ -0.45
CNOT2-242ENST00000553020 RFX5P48382 616 aaPredicted RBP12.27□□□□□ -0.45
CNOT2-242ENST00000553020 TFCP2Q12800 502 aa12.27□□□□□ -0.45
CNOT2-242ENST00000553020 KRT32Q14532 448 aa12.27□□□□□ -0.45
CNOT2-242ENST00000553020 DNAJC10Q8IXB1 793 aa12.27□□□□□ -0.45
CNOT2-242ENST00000553020 TMX3Q96JJ7 454 aa12.27□□□□□ -0.45
CNOT2-242ENST00000553020 ZSCAN31Q96LW9 406 aaPredicted RBP12.27□□□□□ -0.45
CNOT2-242ENST00000553020 LSG1Q9H089 658 aaKnown RBP12.27□□□□□ -0.45
CNOT2-242ENST00000553020 GOLGA6L3A6NEY3 463 aa12.26□□□□□ -0.45
CNOT2-242ENST00000553020 EYA2O00167 538 aa12.26□□□□□ -0.45
CNOT2-242ENST00000553020 CASP7P55210 303 aa12.26□□□□□ -0.45
CNOT2-242ENST00000553020 TRIM28Q13263 835 aaKnown RBP12.26□□□□□ -0.45
CNOT2-242ENST00000553020 ANKRD1Q15327 319 aa12.26□□□□□ -0.45
CNOT2-242ENST00000553020 EPHA10Q5JZY3 1008 aa12.26□□□□□ -0.45
CNOT2-242ENST00000553020 GORABQ5T7V8 394 aa12.26□□□□□ -0.45
CNOT2-242ENST00000553020 PROM2Q8N271 834 aa12.26□□□□□ -0.45
CNOT2-242ENST00000553020 DNAJC2Q99543 621 aaKnown RBP12.26□□□□□ -0.45
CNOT2-242ENST00000553020 ISCA1Q9BUE6 129 aa12.26□□□□□ -0.45
CNOT2-242ENST00000553020 CEP126Q9P2H0 1117 aa12.26□□□□□ -0.45
CNOT2-242ENST00000553020 CYP46A1Q9Y6A2 500 aa12.26□□□□□ -0.45
CNOT2-242ENST00000553020 TJP1Q07157 1748 aa12.25□□□□□ -0.45
CNOT2-242ENST00000553020 PDIA4P13667 645 aaKnown RBP12.25□□□□□ -0.45
CNOT2-242ENST00000553020 NCLP19338 710 aaKnown RBP12.25□□□□□ -0.45
CNOT2-242ENST00000553020 SSFA2P28290 1259 aa12.25□□□□□ -0.45
CNOT2-242ENST00000553020 FSTL1Q12841 308 aa12.25□□□□□ -0.45
CNOT2-242ENST00000553020 NMIQ13287 307 aaPredicted RBP12.25□□□□□ -0.45
CNOT2-242ENST00000553020 CUL4AQ13619 759 aa12.25□□□□□ -0.45
CNOT2-242ENST00000553020 CCDC158Q5M9N0 1113 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms