RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 TNMDQ9H2S6 317 aa14.66□□□□□ -0.06
HDAC7-230ENST00000552960 KRT85P78386 507 aa14.66□□□□□ -0.06
HDAC7-230ENST00000552960 ME3Q16798 604 aa14.66□□□□□ -0.06
HDAC7-230ENST00000552960 TTC6Q86TZ1 520 aa14.66□□□□□ -0.06
HDAC7-230ENST00000552960 SSH3Q8TE77 659 aa14.66□□□□□ -0.06
HDAC7-230ENST00000552960 DACT1Q9NYF0 836 aa14.66□□□□□ -0.06
HDAC7-230ENST00000552960 MAP3K2Q9Y2U5 619 aa14.66□□□□□ -0.06
HDAC7-230ENST00000552960 CABP4P57796 275 aa14.66□□□□□ -0.06
HDAC7-230ENST00000552960 NAA30Q147X3 362 aaPredicted RBP14.66□□□□□ -0.06
HDAC7-230ENST00000552960 ANO6Q4KMQ2 910 aa14.66□□□□□ -0.06
HDAC7-230ENST00000552960 PTCD1O75127 700 aaKnown RBP14.65□□□□□ -0.06
HDAC7-230ENST00000552960 RAB11FIP3O75154 756 aa14.65□□□□□ -0.06
HDAC7-230ENST00000552960 ZKSCAN1P17029 563 aaPredicted RBP14.65□□□□□ -0.06
HDAC7-230ENST00000552960 FOSBP53539 338 aa14.65□□□□□ -0.06
HDAC7-230ENST00000552960 CEBPZQ03701 1054 aaKnown RBP14.65□□□□□ -0.06
HDAC7-230ENST00000552960 TYRO3Q06418 890 aa14.65□□□□□ -0.06
HDAC7-230ENST00000552960 CDC37L1Q7L3B6 337 aa14.65□□□□□ -0.06
HDAC7-230ENST00000552960 DCAF5Q96JK2 942 aa14.65□□□□□ -0.06
HDAC7-230ENST00000552960 PA2G4Q9UQ80 394 aaKnown RBP14.65□□□□□ -0.06
HDAC7-230ENST00000552960 HEG1Q9ULI3 1381 aa14.65□□□□□ -0.06
HDAC7-230ENST00000552960 GTF2F1P35269 517 aaKnown RBP eCLIP14.65□□□□□ -0.062e-7■■■■□ 25.5
HDAC7-230ENST00000552960 BEND3Q5T5X7 828 aa14.65□□□□□ -0.06
HDAC7-230ENST00000552960 FAM200AQ8TCP9 573 aa14.65□□□□□ -0.06
HDAC7-230ENST00000552960 BICD2Q8TD16 824 aa14.65□□□□□ -0.06
HDAC7-230ENST00000552960 FUCA2Q9BTY2 467 aa14.65□□□□□ -0.06
HDAC7-230ENST00000552960 IFIT2P09913 472 aaKnown RBP14.64□□□□□ -0.07
HDAC7-230ENST00000552960 CLASRPQ8N2M8 674 aaKnown RBP14.64□□□□□ -0.07
HDAC7-230ENST00000552960 RUFY2Q8WXA3 655 aa14.64□□□□□ -0.07
HDAC7-230ENST00000552960 DNAAF4Q8WXU2 420 aa14.64□□□□□ -0.07
HDAC7-230ENST00000552960 DBF4Q9UBU7 674 aaPredicted RBP14.64□□□□□ -0.07
HDAC7-230ENST00000552960 NUTM2BA6NNL0 878 aaPredicted RBP14.64□□□□□ -0.07
HDAC7-230ENST00000552960 NUTM2EB1AL46 878 aaPredicted RBP14.64□□□□□ -0.07
HDAC7-230ENST00000552960 COL9A3Q14050 684 aaPredicted RBP14.64□□□□□ -0.07
HDAC7-230ENST00000552960 NUTM2AQ8IVF1 878 aaPredicted RBP14.64□□□□□ -0.07
HDAC7-230ENST00000552960 FBXW7Q969H0 707 aa14.64□□□□□ -0.07
HDAC7-230ENST00000552960 IL2RBP14784 551 aa14.64□□□□□ -0.07
HDAC7-230ENST00000552960 SPATA32Q96LK8 384 aa14.63□□□□□ -0.07
HDAC7-230ENST00000552960 TPCN1Q9ULQ1 816 aa14.63□□□□□ -0.07
HDAC7-230ENST00000552960 OVOS2A0A0G2JMS6 1433 aa14.63□□□□□ -0.07
HDAC7-230ENST00000552960 TNNT1P13805 278 aa14.63□□□□□ -0.07
HDAC7-230ENST00000552960 TPD52L1Q16890 204 aaPredicted RBP14.63□□□□□ -0.07
HDAC7-230ENST00000552960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.63□□□□□ -0.07
HDAC7-230ENST00000552960 GLRX3O76003 335 aaKnown RBP14.62□□□□□ -0.07
HDAC7-230ENST00000552960 MAPK8IP2Q13387 824 aaPredicted RBP14.62□□□□□ -0.07
HDAC7-230ENST00000552960 ZNF771Q7L3S4 317 aaPredicted RBP14.62□□□□□ -0.07
HDAC7-230ENST00000552960 CARD10Q9BWT7 1032 aa14.62□□□□□ -0.07
HDAC7-230ENST00000552960 C9orf78Q9NZ63 289 aaPredicted RBP14.62□□□□□ -0.07
HDAC7-230ENST00000552960 MRVI1Q9Y6F6 885 aa14.62□□□□□ -0.07
HDAC7-230ENST00000552960 TPM3P06753 285 aa14.62□□□□□ -0.07
HDAC7-230ENST00000552960 FAM227BQ96M60 508 aa14.62□□□□□ -0.07
HDAC7-230ENST00000552960 CBX8Q9HC52 389 aa14.62□□□□□ -0.07
HDAC7-230ENST00000552960 RBM8AQ9Y5S9 174 aaKnown RBP14.62□□□□□ -0.07
HDAC7-230ENST00000552960 ROBO1Q9Y6N7 1651 aa14.62□□□□□ -0.07
HDAC7-230ENST00000552960 EP400Q96L91 3159 aa14.62□□□□□ -0.07
HDAC7-230ENST00000552960 AACSQ86V21 672 aa14.62□□□□□ -0.07
HDAC7-230ENST00000552960 TTC5Q8N0Z6 440 aa14.62□□□□□ -0.07
HDAC7-230ENST00000552960 BBXQ8WY36 941 aaPredicted RBP14.62□□□□□ -0.07
HDAC7-230ENST00000552960 DNAJC25Q9H1X3 360 aa14.62□□□□□ -0.07
HDAC7-230ENST00000552960 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.62□□□□□ -0.07
HDAC7-230ENST00000552960 V9GYY5 206 aaPredicted RBP14.62□□□□□ -0.07
HDAC7-230ENST00000552960 NPHP1O15259 732 aa14.61□□□□□ -0.07
HDAC7-230ENST00000552960 PPFIA3O75145 1194 aa14.61□□□□□ -0.07
HDAC7-230ENST00000552960 HOXB7P09629 217 aa14.61□□□□□ -0.07
HDAC7-230ENST00000552960 VPS53Q5VIR6 699 aa14.61□□□□□ -0.07
HDAC7-230ENST00000552960 COPS6Q7L5N1 327 aa14.61□□□□□ -0.07
HDAC7-230ENST00000552960 XAGE3Q8WTP9 111 aa14.61□□□□□ -0.07
HDAC7-230ENST00000552960 DDX11Q96FC9 970 aa14.61□□□□□ -0.07
HDAC7-230ENST00000552960 ZSCAN31Q96LW9 406 aaPredicted RBP14.61□□□□□ -0.07
HDAC7-230ENST00000552960 CCDC8Q9H0W5 538 aaPredicted RBP14.61□□□□□ -0.07
HDAC7-230ENST00000552960 AOX1Q06278 1338 aa14.61□□□□□ -0.07
HDAC7-230ENST00000552960 SIL1Q9H173 461 aa14.61□□□□□ -0.07
HDAC7-230ENST00000552960 ABCA3Q99758 1704 aa14.61□□□□□ -0.07
HDAC7-230ENST00000552960 SH2B1Q9NRF2 756 aaPredicted RBP14.6□□□□□ -0.07
HDAC7-230ENST00000552960 NHSL1Q5SYE7 1610 aa14.6□□□□□ -0.07
HDAC7-230ENST00000552960 ZNF165P49910 485 aa14.6□□□□□ -0.07
HDAC7-230ENST00000552960 ST3GAL1Q11201 340 aa14.6□□□□□ -0.07
HDAC7-230ENST00000552960 SIPA1L3O60292 1781 aaPredicted RBP14.6□□□□□ -0.07
HDAC7-230ENST00000552960 BOLA2Q9H3K6 86 aa14.6□□□□□ -0.07
HDAC7-230ENST00000552960 CLIP2Q9UDT6 1046 aa14.6□□□□□ -0.07
HDAC7-230ENST00000552960 CCDC9Q9Y3X0 531 aaKnown RBP14.6□□□□□ -0.07
HDAC7-230ENST00000552960 CREB3L3Q68CJ9 461 aa14.59□□□□□ -0.07
HDAC7-230ENST00000552960 DDX21Q9NR30 783 aaKnown RBP eCLIP14.59□□□□□ -0.07
HDAC7-230ENST00000552960 ECHDC1Q9NTX5 307 aa14.59□□□□□ -0.07
HDAC7-230ENST00000552960 CGNQ9P2M7 1197 aaKnown RBP14.59□□□□□ -0.07
HDAC7-230ENST00000552960 PCDH11XQ9BZA7 1347 aa14.59□□□□□ -0.07
HDAC7-230ENST00000552960 PCDH11YQ9BZA8 1340 aa14.59□□□□□ -0.07
HDAC7-230ENST00000552960 A0A087WWV3 80 aa14.59□□□□□ -0.07
HDAC7-230ENST00000552960 A1BGP04217 495 aa14.59□□□□□ -0.07
HDAC7-230ENST00000552960 UTP14CQ5TAP6 766 aaKnown RBP14.59□□□□□ -0.07
HDAC7-230ENST00000552960 CCDC112Q8NEF3 446 aa14.59□□□□□ -0.07
HDAC7-230ENST00000552960 GPATCH3Q96I76 525 aa14.59□□□□□ -0.07
HDAC7-230ENST00000552960 SCN11AQ9UI33 1791 aa14.59□□□□□ -0.07
HDAC7-230ENST00000552960 C5P01031 1676 aa14.59□□□□□ -0.07
HDAC7-230ENST00000552960 NR1I2O75469 434 aa14.58□□□□□ -0.07
HDAC7-230ENST00000552960 BLOC1S2Q6QNY1 142 aa14.58□□□□□ -0.07
HDAC7-230ENST00000552960 KSR2Q6VAB6 950 aa14.58□□□□□ -0.07
HDAC7-230ENST00000552960 ZSWIM6Q9HCJ5 1215 aa14.58□□□□□ -0.07
HDAC7-230ENST00000552960 NAP1L2Q9ULW6 460 aaPredicted RBP14.58□□□□□ -0.07
HDAC7-230ENST00000552960 IGKV5-2P06315 115 aa14.58□□□□□ -0.08
HDAC7-230ENST00000552960 HSP90B1P14625 803 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms