RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 NDUFB9Q9Y6M9 179 aa24.01■■□□□ 1.43
SSH1-209ENST00000551165 EDC3Q96F86 508 aaKnown RBP24.01■■□□□ 1.43
SSH1-209ENST00000551165 REC8O95072 547 aa24■■□□□ 1.43
SSH1-209ENST00000551165 ITGA6P23229 1130 aa24■■□□□ 1.43
SSH1-209ENST00000551165 IFIT5Q13325 482 aaKnown RBP24■■□□□ 1.43
SSH1-209ENST00000551165 BECN1Q14457 450 aa24■■□□□ 1.43
SSH1-209ENST00000551165 BRWD3Q6RI45 1802 aa24■■□□□ 1.43
SSH1-209ENST00000551165 CD2BP2O95400 341 aaKnown RBP23.99■■□□□ 1.43
SSH1-209ENST00000551165 PDE8AO60658 829 aa23.99■■□□□ 1.43
SSH1-209ENST00000551165 CIAO1O76071 339 aa23.99■■□□□ 1.43
SSH1-209ENST00000551165 NEUROD6Q96NK8 337 aa23.99■■□□□ 1.43
SSH1-209ENST00000551165 UTP14AQ9BVJ6 771 aaKnown RBP23.99■■□□□ 1.43
SSH1-209ENST00000551165 GNPATO15228 680 aa23.98■■□□□ 1.43
SSH1-209ENST00000551165 ANO2Q9NQ90 1003 aa23.98■■□□□ 1.43
SSH1-209ENST00000551165 SRP68Q9UHB9 627 aaKnown RBP23.98■■□□□ 1.43
SSH1-209ENST00000551165 MYH3P11055 1940 aa23.98■■□□□ 1.43
SSH1-209ENST00000551165 NTSR2O95665 410 aa23.98■■□□□ 1.43
SSH1-209ENST00000551165 TAF7LQ5H9L4 462 aa23.98■■□□□ 1.43
SSH1-209ENST00000551165 CWC27Q6UX04 472 aaKnown RBP23.98■■□□□ 1.43
SSH1-209ENST00000551165 BCL2L12Q9HB09 334 aa23.98■■□□□ 1.43
SSH1-209ENST00000551165 LRRC4BQ9NT99 713 aa23.98■■□□□ 1.43
SSH1-209ENST00000551165 SH3TC1Q8TE82 1336 aa23.97■■□□□ 1.43
SSH1-209ENST00000551165 LY75O60449 1722 aa23.97■■□□□ 1.43
SSH1-209ENST00000551165 BCORQ6W2J9 1755 aa23.97■■□□□ 1.43
SSH1-209ENST00000551165 SPRYD3Q8NCJ5 442 aa23.97■■□□□ 1.43
SSH1-209ENST00000551165 BCL11BQ9C0K0 894 aaPredicted RBP23.96■■□□□ 1.43
SSH1-209ENST00000551165 RPS6KA4O75676 772 aa23.96■■□□□ 1.43
SSH1-209ENST00000551165 RC3H1Q5TC82 1133 aaKnown RBP23.96■■□□□ 1.43
SSH1-209ENST00000551165 BICDL1Q6ZP65 573 aa23.96■■□□□ 1.43
SSH1-209ENST00000551165 EVI5LQ96CN4 794 aa23.96■■□□□ 1.43
SSH1-209ENST00000551165 ATP5JP18859 108 aa23.95■■□□□ 1.43
SSH1-209ENST00000551165 USPL1Q5W0Q7 1092 aa23.95■■□□□ 1.43
SSH1-209ENST00000551165 KRT27Q7Z3Y8 459 aa23.95■■□□□ 1.43
SSH1-209ENST00000551165 A0A1B0GUL7 405 aa23.95■■□□□ 1.42
SSH1-209ENST00000551165 SGSM2O43147 1006 aa23.95■■□□□ 1.42
SSH1-209ENST00000551165 PARP10Q53GL7 1025 aa23.95■■□□□ 1.42
SSH1-209ENST00000551165 ZNF609O15014 1411 aa23.94■■□□□ 1.42
SSH1-209ENST00000551165 TAF1LQ8IZX4 1826 aa23.94■■□□□ 1.42
SSH1-209ENST00000551165 EIF5BO60841 1220 aaKnown RBP23.94■■□□□ 1.42
SSH1-209ENST00000551165 CEP126Q9P2H0 1117 aa23.94■■□□□ 1.42
SSH1-209ENST00000551165 ANKRD18BA2A2Z9 1011 aa23.94■■□□□ 1.42
SSH1-209ENST00000551165 TBC1D9BQ66K14 1250 aa23.94■■□□□ 1.42
SSH1-209ENST00000551165 LDHAL6AQ6ZMR3 332 aa23.94■■□□□ 1.42
SSH1-209ENST00000551165 GPR108Q9NPR9 543 aa23.94■■□□□ 1.42
SSH1-209ENST00000551165 RIPOR2Q9Y4F9 1068 aa23.94■■□□□ 1.42
SSH1-209ENST00000551165 TRIM37O94972 964 aa23.93■■□□□ 1.42
SSH1-209ENST00000551165 ANP32EQ9BTT0 268 aa23.93■■□□□ 1.42
SSH1-209ENST00000551165 PALD1Q9ULE6 856 aa23.93■■□□□ 1.42
SSH1-209ENST00000551165 ZNF652Q9Y2D9 606 aa23.93■■□□□ 1.42
SSH1-209ENST00000551165 CHGBP05060 677 aa23.93■■□□□ 1.42
SSH1-209ENST00000551165 CLEC4GQ6UXB4 293 aa23.93■■□□□ 1.42
SSH1-209ENST00000551165 DDX60Q8IY21 1712 aaKnown RBP23.93■■□□□ 1.42
SSH1-209ENST00000551165 RIC1Q4ADV7 1423 aa23.93■■□□□ 1.42
SSH1-209ENST00000551165 ADORA1P30542 326 aa23.92■■□□□ 1.42
SSH1-209ENST00000551165 FAM227BQ96M60 508 aa23.92■■□□□ 1.42
SSH1-209ENST00000551165 SLKQ9H2G2 1235 aaPredicted RBP23.92■■□□□ 1.42
SSH1-209ENST00000551165 SEC31BQ9NQW1 1179 aa23.92■■□□□ 1.42
SSH1-209ENST00000551165 DIAPH3Q9NSV4 1193 aa23.92■■□□□ 1.42
SSH1-209ENST00000551165 ARHGEF1Q92888 912 aaKnown RBP23.92■■□□□ 1.42
SSH1-209ENST00000551165 DNAJC2Q99543 621 aaKnown RBP23.92■■□□□ 1.42
SSH1-209ENST00000551165 PHF14O94880 888 aa23.91■■□□□ 1.42
SSH1-209ENST00000551165 NARFQ9UHQ1 456 aa23.91■■□□□ 1.42
SSH1-209ENST00000551165 RTCBQ9Y3I0 505 aaKnown RBP23.91■■□□□ 1.42
SSH1-209ENST00000551165 SNX21Q969T3 373 aa23.91■■□□□ 1.42
SSH1-209ENST00000551165 FSD1Q9BTV5 496 aa23.91■■□□□ 1.42
SSH1-209ENST00000551165 ERFEQ4G0M1 354 aa23.9■■□□□ 1.42
SSH1-209ENST00000551165 FAM196AQ6ZSG2 479 aa23.9■■□□□ 1.42
SSH1-209ENST00000551165 C3orf67Q6ZVT6 689 aa23.9■■□□□ 1.42
SSH1-209ENST00000551165 HSCBQ8IWL3 235 aa23.9■■□□□ 1.42
SSH1-209ENST00000551165 CNNM1Q9NRU3 951 aa23.9■■□□□ 1.42
SSH1-209ENST00000551165 FBXO3Q9UK99 471 aa23.9■■□□□ 1.42
SSH1-209ENST00000551165 C4BP0C0L5 1744 aa23.9■■□□□ 1.42
SSH1-209ENST00000551165 SCN7AQ01118 1682 aa23.89■■□□□ 1.42
SSH1-209ENST00000551165 NMIQ13287 307 aaPredicted RBP23.89■■□□□ 1.41
SSH1-209ENST00000551165 METTL24Q5JXM2 366 aa23.89■■□□□ 1.41
SSH1-209ENST00000551165 HAUS7Q99871 368 aa23.89■■□□□ 1.41
SSH1-209ENST00000551165 LSG1Q9H089 658 aaKnown RBP23.89■■□□□ 1.41
SSH1-209ENST00000551165 DDX46Q7L014 1031 aaKnown RBP23.88■■□□□ 1.41
SSH1-209ENST00000551165 COL4A1P02462 1669 aa23.88■■□□□ 1.41
SSH1-209ENST00000551165 XAGE2Q96GT9 111 aa23.88■■□□□ 1.41
SSH1-209ENST00000551165 AK7Q96M32 723 aa23.88■■□□□ 1.41
SSH1-209ENST00000551165 A0A0D9SFI3 127 aa23.87■■□□□ 1.41
SSH1-209ENST00000551165 NBR1Q14596 966 aa23.87■■□□□ 1.41
SSH1-209ENST00000551165 RABEP1Q15276 862 aa23.87■■□□□ 1.41
SSH1-209ENST00000551165 CCDC24Q8N4L8 307 aa23.87■■□□□ 1.41
SSH1-209ENST00000551165 VGLL2Q8N8G2 317 aa23.87■■□□□ 1.41
SSH1-209ENST00000551165 HELBQ8NG08 1087 aaPredicted RBP23.87■■□□□ 1.41
SSH1-209ENST00000551165 ZPR1O75312 459 aa23.86■■□□□ 1.41
SSH1-209ENST00000551165 RBM6P78332 1123 aaKnown RBP23.86■■□□□ 1.41
SSH1-209ENST00000551165 PTH1RQ03431 593 aa23.86■■□□□ 1.41
SSH1-209ENST00000551165 ANTXR1Q9H6X2 564 aa23.86■■□□□ 1.41
SSH1-209ENST00000551165 SLFNL1Q499Z3 407 aa23.85■■□□□ 1.41
SSH1-209ENST00000551165 SNAP23O00161 211 aa23.85■■□□□ 1.41
SSH1-209ENST00000551165 ZNF772Q68DY9 489 aaPredicted RBP23.85■■□□□ 1.41
SSH1-209ENST00000551165 AKAP2Q9Y2D5 859 aa23.85■■□□□ 1.41
SSH1-209ENST00000551165 RAD50Q92878 1312 aa23.85■■□□□ 1.41
SSH1-209ENST00000551165 GOLIM4O00461 696 aa23.84■■□□□ 1.41
SSH1-209ENST00000551165 ATP2B3Q16720 1220 aa23.84■■□□□ 1.41
SSH1-209ENST00000551165 ABCC12Q96J65 1359 aa23.84■■□□□ 1.41
SSH1-209ENST00000551165 SCARF1Q14162 830 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms