RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 LTBP3Q9NS15 1303 aa22.1■■□□□ 1.13
CDK4-207ENST00000550419 CCT4P50991 539 aaKnown RBP22.1■■□□□ 1.13
CDK4-207ENST00000550419 CTSWP56202 376 aa22.1■■□□□ 1.13
CDK4-207ENST00000550419 GRAPQ13588 217 aa22.1■■□□□ 1.13
CDK4-207ENST00000550419 CCDC93Q567U6 631 aa22.1■■□□□ 1.13
CDK4-207ENST00000550419 GRAPLQ8TC17 118 aaPredicted RBP22.1■■□□□ 1.13
CDK4-207ENST00000550419 C9orf78Q9NZ63 289 aaPredicted RBP22.1■■□□□ 1.13
CDK4-207ENST00000550419 RTL9Q8NET4 1388 aa22.1■■□□□ 1.13
CDK4-207ENST00000550419 PPEF1O14829 653 aaPredicted RBP22.09■■□□□ 1.13
CDK4-207ENST00000550419 RTKN2Q8IZC4 609 aa22.09■■□□□ 1.13
CDK4-207ENST00000550419 TTLL11Q8NHH1 800 aa22.09■■□□□ 1.13
CDK4-207ENST00000550419 CACNA1SQ13698 1873 aa22.09■■□□□ 1.13
CDK4-207ENST00000550419 SNED1Q8TER0 1413 aa22.08■■□□□ 1.13
CDK4-207ENST00000550419 NFKBIEO00221 500 aa22.08■■□□□ 1.13
CDK4-207ENST00000550419 ATF7IPQ6VMQ6 1270 aa22.08■■□□□ 1.13
CDK4-207ENST00000550419 ATP6V0A2Q9Y487 856 aa22.08■■□□□ 1.13
CDK4-207ENST00000550419 FER1L6Q2WGJ9 1857 aa22.07■■□□□ 1.12
CDK4-207ENST00000550419 CSF1RP07333 972 aa22.07■■□□□ 1.12
CDK4-207ENST00000550419 SP8Q8IXZ3 490 aa22.07■■□□□ 1.12
CDK4-207ENST00000550419 ZNF219Q9P2Y4 722 aaPredicted RBP22.07■■□□□ 1.12
CDK4-207ENST00000550419 TRIM27P14373 513 aa22.06■■□□□ 1.12
CDK4-207ENST00000550419 INTS3Q68E01 1043 aaKnown RBP22.06■■□□□ 1.12
CDK4-207ENST00000550419 MYH3P11055 1940 aa22.06■■□□□ 1.12
CDK4-207ENST00000550419 LMNB1P20700 586 aa22.05■■□□□ 1.12
CDK4-207ENST00000550419 RPS8P62241 208 aaKnown RBP22.05■■□□□ 1.12
CDK4-207ENST00000550419 ZKSCAN2Q63HK3 967 aa22.05■■□□□ 1.12
CDK4-207ENST00000550419 FRAT1Q92837 279 aaPredicted RBP22.05■■□□□ 1.12
CDK4-207ENST00000550419 USP44Q9H0E7 712 aa22.05■■□□□ 1.12
CDK4-207ENST00000550419 TMX4Q9H1E5 349 aaPredicted RBP22.05■■□□□ 1.12
CDK4-207ENST00000550419 TAOK3Q9H2K8 898 aa22.05■■□□□ 1.12
CDK4-207ENST00000550419 NBPF7P0C2Y1 421 aaPredicted RBP22.04■■□□□ 1.12
CDK4-207ENST00000550419 FOXO4P98177 505 aa22.04■■□□□ 1.12
CDK4-207ENST00000550419 CELF1Q92879 486 aaKnown RBP22.04■■□□□ 1.12
CDK4-207ENST00000550419 PSMD1Q99460 953 aa22.04■■□□□ 1.12
CDK4-207ENST00000550419 FKBP4Q02790 459 aaKnown RBP eCLIP22.03■■□□□ 1.12
CDK4-207ENST00000550419 CDC5LQ99459 802 aaKnown RBP22.03■■□□□ 1.12
CDK4-207ENST00000550419 SEC31BQ9NQW1 1179 aa22.03■■□□□ 1.12
CDK4-207ENST00000550419 RASSF7Q02833 373 aa22.02■■□□□ 1.12
CDK4-207ENST00000550419 OLFM4Q6UX06 510 aa22.02■■□□□ 1.12
CDK4-207ENST00000550419 GREM2Q9H772 168 aa22.02■■□□□ 1.12
CDK4-207ENST00000550419 RCAN3Q9UKA8 241 aa22.02■■□□□ 1.12
CDK4-207ENST00000550419 LRRC37AA6NMS7 1700 aa22.02■■□□□ 1.12
CDK4-207ENST00000550419 ZC3H4Q9UPT8 1303 aaKnown RBP22.02■■□□□ 1.12
CDK4-207ENST00000550419 SBF1O95248 1867 aa22.01■■□□□ 1.11
CDK4-207ENST00000550419 C9orf131Q5VYM1 1079 aa22.01■■□□□ 1.11
CDK4-207ENST00000550419 PRELPP51888 382 aa22■■□□□ 1.11
CDK4-207ENST00000550419 ANKRD18AQ8IVF6 992 aa22■■□□□ 1.11
CDK4-207ENST00000550419 KAZALD1Q96I82 304 aa22■■□□□ 1.11
CDK4-207ENST00000550419 YTHDC1Q96MU7 727 aaKnown RBP22■■□□□ 1.11
CDK4-207ENST00000550419 RTFDC1Q9BY42 306 aaPredicted RBP22■■□□□ 1.11
CDK4-207ENST00000550419 HDAC5Q9UQL6 1122 aa22■■□□□ 1.11
CDK4-207ENST00000550419 TAF1P21675 1872 aa21.99■■□□□ 1.11
CDK4-207ENST00000550419 COL4A1P02462 1669 aa21.99■■□□□ 1.11
CDK4-207ENST00000550419 RABL6Q3YEC7 729 aaPredicted RBP21.99■■□□□ 1.11
CDK4-207ENST00000550419 EPHA10Q5JZY3 1008 aa21.99■■□□□ 1.11
CDK4-207ENST00000550419 SUCLG2Q96I99 432 aa21.99■■□□□ 1.11
CDK4-207ENST00000550419 CCDC85AQ96PX6 553 aaPredicted RBP21.99■■□□□ 1.11
CDK4-207ENST00000550419 VPS33BQ9H267 617 aa21.99■■□□□ 1.11
CDK4-207ENST00000550419 RNF181Q9P0P0 153 aa21.99■■□□□ 1.11
CDK4-207ENST00000550419 ITGA6P23229 1130 aa21.98■■□□□ 1.11
CDK4-207ENST00000550419 FAM161AQ3B820 660 aa21.98■■□□□ 1.11
CDK4-207ENST00000550419 LMBR1LQ6UX01 489 aa21.98■■□□□ 1.11
CDK4-207ENST00000550419 BSDC1Q9NW68 430 aaPredicted RBP21.98■■□□□ 1.11
CDK4-207ENST00000550419 MPNDQ8N594 471 aa21.97■■□□□ 1.11
CDK4-207ENST00000550419 SUPT20HQ8NEM7 779 aa21.97■■□□□ 1.11
CDK4-207ENST00000550419 ANKRD18BA2A2Z9 1011 aa21.96■■□□□ 1.11
CDK4-207ENST00000550419 UBTFL1P0CB47 393 aaPredicted RBP21.96■■□□□ 1.11
CDK4-207ENST00000550419 MS4A1P11836 297 aa21.96■■□□□ 1.11
CDK4-207ENST00000550419 IFIT5Q13325 482 aaKnown RBP21.96■■□□□ 1.11
CDK4-207ENST00000550419 DPP8Q6V1X1 898 aaPredicted RBP21.96■■□□□ 1.11
CDK4-207ENST00000550419 DZIP1LQ8IYY4 767 aaKnown RBP21.96■■□□□ 1.11
CDK4-207ENST00000550419 CLUAP1Q96AJ1 413 aa21.96■■□□□ 1.11
CDK4-207ENST00000550419 BICC1Q9H694 974 aaKnown RBP21.96■■□□□ 1.11
CDK4-207ENST00000550419 PODXL2Q9NZ53 605 aa21.96■■□□□ 1.11
CDK4-207ENST00000550419 TNNQ9UQP3 1299 aa21.96■■□□□ 1.11
CDK4-207ENST00000550419 GNAI3P08754 354 aa21.95■■□□□ 1.1
CDK4-207ENST00000550419 IGHMBP2P38935 993 aaKnown RBP21.95■■□□□ 1.1
CDK4-207ENST00000550419 SLC51AQ86UW1 340 aa21.95■■□□□ 1.1
CDK4-207ENST00000550419 IARSP41252 1262 aaKnown RBP21.94■■□□□ 1.1
CDK4-207ENST00000550419 CCDC57Q2TAC2 916 aa21.94■■□□□ 1.1
CDK4-207ENST00000550419 FTSJ3Q8IY81 847 aaKnown RBP21.94■■□□□ 1.1
CDK4-207ENST00000550419 ANKRD44Q8N8A2 993 aa21.94■■□□□ 1.1
CDK4-207ENST00000550419 ZNF277Q9NRM2 450 aaPredicted RBP21.94■■□□□ 1.1
CDK4-207ENST00000550419 DICER1Q9UPY3 1922 aaKnown RBP21.94■■□□□ 1.1
CDK4-207ENST00000550419 LTBP1Q14766 1721 aa21.93■■□□□ 1.1
CDK4-207ENST00000550419 TMEM57Q8N5G2 664 aa21.93■■□□□ 1.1
CDK4-207ENST00000550419 MEIS3Q99687 375 aa21.93■■□□□ 1.1
CDK4-207ENST00000550419 DUOX1Q9NRD9 1551 aa21.93■■□□□ 1.1
CDK4-207ENST00000550419 NSFL1CQ9UNZ2 370 aaKnown RBP21.93■■□□□ 1.1
CDK4-207ENST00000550419 GPSM2P81274 684 aa21.92■■□□□ 1.1
CDK4-207ENST00000550419 MPHOSPH8Q99549 860 aa21.92■■□□□ 1.1
CDK4-207ENST00000550419 MINPP1Q9UNW1 487 aa21.92■■□□□ 1.1
CDK4-207ENST00000550419 CHMP3Q9Y3E7 222 aa21.92■■□□□ 1.1
CDK4-207ENST00000550419 CCDC88AQ3V6T2 1871 aa21.92■■□□□ 1.1
CDK4-207ENST00000550419 XDHP47989 1333 aa21.91■■□□□ 1.1
CDK4-207ENST00000550419 ZNF784Q8NCA9 323 aaPredicted RBP21.91■■□□□ 1.1
CDK4-207ENST00000550419 TIAM2Q8IVF5 1701 aa21.9■■□□□ 1.1
CDK4-207ENST00000550419 RLBP1P12271 317 aa21.9■■□□□ 1.1
CDK4-207ENST00000550419 KIAA2012Q0VF49 1180 aa21.9■■□□□ 1.1
CDK4-207ENST00000550419 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms