RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 CLEC4GQ6UXB4 293 aa8.08□□□□□ -1.12
CASC18-202ENST00000548557 GIGYF2Q6Y7W6 1299 aaKnown RBP8.08□□□□□ -1.12
CASC18-202ENST00000548557 MYH14Q7Z406 1995 aaKnown RBP8.08□□□□□ -1.12
CASC18-202ENST00000548557 ZBTB7BO15156 539 aaPredicted RBP8.08□□□□□ -1.12
CASC18-202ENST00000548557 TRIM28Q13263 835 aaKnown RBP8.08□□□□□ -1.12
CASC18-202ENST00000548557 EZH2Q15910 746 aaKnown RBP8.08□□□□□ -1.12
CASC18-202ENST00000548557 FOXD4L6Q3SYB3 417 aaPredicted RBP8.08□□□□□ -1.12
CASC18-202ENST00000548557 TRAPPC3LQ5T215 181 aa8.08□□□□□ -1.12
CASC18-202ENST00000548557 FOXD4L3Q6VB84 417 aaPredicted RBP8.08□□□□□ -1.12
CASC18-202ENST00000548557 FLAD1Q8NFF5 587 aa8.08□□□□□ -1.12
CASC18-202ENST00000548557 TCIRG1Q13488 830 aa8.07□□□□□ -1.12
CASC18-202ENST00000548557 AKT1S1Q96B36 256 aa8.07□□□□□ -1.12
CASC18-202ENST00000548557 ZBTB3Q9H5J0 574 aa8.07□□□□□ -1.12
CASC18-202ENST00000548557 TBC1D2BQ9UPU7 963 aa8.07□□□□□ -1.12
CASC18-202ENST00000548557 HDAC5Q9UQL6 1122 aa8.07□□□□□ -1.12
CASC18-202ENST00000548557 ZNF652Q9Y2D9 606 aa8.07□□□□□ -1.12
CASC18-202ENST00000548557 ECM2O94769 699 aaPredicted RBP8.07□□□□□ -1.12
CASC18-202ENST00000548557 CAMTA2O94983 1202 aa8.07□□□□□ -1.12
CASC18-202ENST00000548557 NARFQ9UHQ1 456 aa8.07□□□□□ -1.12
CASC18-202ENST00000548557 ZPR1O75312 459 aa8.06□□□□□ -1.12
CASC18-202ENST00000548557 IGKV5-2P06315 115 aa8.06□□□□□ -1.12
CASC18-202ENST00000548557 GNAI3P08754 354 aa8.06□□□□□ -1.12
CASC18-202ENST00000548557 GTF2E1P29083 439 aaPredicted RBP8.06□□□□□ -1.12
CASC18-202ENST00000548557 RFC4P35249 363 aa8.06□□□□□ -1.12
CASC18-202ENST00000548557 HDAC1Q13547 482 aaPredicted RBP8.06□□□□□ -1.12
CASC18-202ENST00000548557 DEFB132Q7Z7B7 95 aa8.06□□□□□ -1.12
CASC18-202ENST00000548557 CCDC191Q8NCU4 936 aa8.06□□□□□ -1.12
CASC18-202ENST00000548557 ARHGEF1Q92888 912 aaKnown RBP8.06□□□□□ -1.12
CASC18-202ENST00000548557 MYD88Q99836 296 aa8.06□□□□□ -1.12
CASC18-202ENST00000548557 ZBTB40Q9NUA8 1239 aa8.06□□□□□ -1.12
CASC18-202ENST00000548557 TFCP2L1Q9NZI6 479 aa8.06□□□□□ -1.12
CASC18-202ENST00000548557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.06□□□□□ -1.12
CASC18-202ENST00000548557 NEURL1BA8MQ27 555 aa8.06□□□□□ -1.12
CASC18-202ENST00000548557 GSE1Q14687 1217 aa8.06□□□□□ -1.12
CASC18-202ENST00000548557 UPF1Q92900 1129 aaKnown RBP eCLIP8.06□□□□□ -1.12
CASC18-202ENST00000548557 FBXW7Q969H0 707 aa8.06□□□□□ -1.12
CASC18-202ENST00000548557 ISCA1Q9BUE6 129 aa8.06□□□□□ -1.12
CASC18-202ENST00000548557 MKRN3Q13064 507 aaKnown RBP8.05□□□□□ -1.12
CASC18-202ENST00000548557 GCKRQ14397 625 aa8.05□□□□□ -1.12
CASC18-202ENST00000548557 BECN1Q14457 450 aa8.05□□□□□ -1.12
CASC18-202ENST00000548557 TBC1D32Q96NH3 1257 aa8.05□□□□□ -1.12
CASC18-202ENST00000548557 USP44Q9H0E7 712 aa8.05□□□□□ -1.12
CASC18-202ENST00000548557 UTYO14607 1347 aa8.05□□□□□ -1.12
CASC18-202ENST00000548557 USP42Q9H9J4 1324 aaKnown RBP8.05□□□□□ -1.12
CASC18-202ENST00000548557 SLC15A2Q16348 729 aa8.05□□□□□ -1.12
CASC18-202ENST00000548557 HLFQ16534 295 aa8.05□□□□□ -1.12
CASC18-202ENST00000548557 ZNF827Q17R98 1081 aa8.05□□□□□ -1.12
CASC18-202ENST00000548557 CWF19L2Q2TBE0 894 aaKnown RBP8.05□□□□□ -1.12
CASC18-202ENST00000548557 PARP10Q53GL7 1025 aa8.05□□□□□ -1.12
CASC18-202ENST00000548557 ZNF34Q8IZ26 560 aa8.05□□□□□ -1.12
CASC18-202ENST00000548557 CWC25Q9NXE8 425 aaPredicted RBP8.05□□□□□ -1.12
CASC18-202ENST00000548557 STK32BQ9NY57 414 aa8.05□□□□□ -1.12
CASC18-202ENST00000548557 C9orf78Q9NZ63 289 aaPredicted RBP8.05□□□□□ -1.12
CASC18-202ENST00000548557 N4BP2Q86UW6 1770 aaPredicted RBP8.04□□□□□ -1.12
CASC18-202ENST00000548557 ARFGEF2Q9Y6D5 1785 aa8.04□□□□□ -1.12
CASC18-202ENST00000548557 GRM8O00222 908 aa8.04□□□□□ -1.12
CASC18-202ENST00000548557 FRAT2O75474 233 aaPredicted RBP8.04□□□□□ -1.12
CASC18-202ENST00000548557 PHF14O94880 888 aa8.04□□□□□ -1.12
CASC18-202ENST00000548557 USPL1Q5W0Q7 1092 aa8.04□□□□□ -1.12
CASC18-202ENST00000548557 SPTY2D1Q68D10 685 aaPredicted RBP8.04□□□□□ -1.12
CASC18-202ENST00000548557 AMIGO3Q86WK7 504 aa8.04□□□□□ -1.12
CASC18-202ENST00000548557 SMC5Q8IY18 1101 aa8.04□□□□□ -1.12
CASC18-202ENST00000548557 UPF2Q9HAU5 1272 aaKnown RBP8.04□□□□□ -1.12
CASC18-202ENST00000548557 NUP188Q5SRE5 1749 aa8.04□□□□□ -1.12
CASC18-202ENST00000548557 ATP5J2-PTCD1G3V325 749 aa8.04□□□□□ -1.12
CASC18-202ENST00000548557 UBTFL1P0CB47 393 aaPredicted RBP8.04□□□□□ -1.12
CASC18-202ENST00000548557 MEIS3Q99687 375 aa8.04□□□□□ -1.12
CASC18-202ENST00000548557 SSUH2Q9Y2M2 353 aa8.04□□□□□ -1.12
CASC18-202ENST00000548557 UBR3Q6ZT12 1888 aa8.04□□□□□ -1.12
CASC18-202ENST00000548557 H7C1W4 665 aa8.03□□□□□ -1.12
CASC18-202ENST00000548557 GNAI2P04899 355 aa8.03□□□□□ -1.12
CASC18-202ENST00000548557 NLRP10Q86W26 655 aa8.03□□□□□ -1.12
CASC18-202ENST00000548557 NBPF7P0C2Y1 421 aaPredicted RBP8.03□□□□□ -1.12
CASC18-202ENST00000548557 PPP1R42Q7Z4L9 355 aa8.03□□□□□ -1.12
CASC18-202ENST00000548557 RPAP2Q8IXW5 612 aaPredicted RBP8.03□□□□□ -1.12
CASC18-202ENST00000548557 ZBTB38Q8NAP3 1195 aaPredicted RBP8.03□□□□□ -1.12
CASC18-202ENST00000548557 BCL2L12Q9HB09 334 aa8.03□□□□□ -1.12
CASC18-202ENST00000548557 NIP7Q9Y221 180 aaKnown RBP eCLIP8.03□□□□□ -1.12
CASC18-202ENST00000548557 PCCAP05165 728 aaPredicted RBP8.02□□□□□ -1.12
CASC18-202ENST00000548557 GYS1P13807 737 aa8.02□□□□□ -1.12
CASC18-202ENST00000548557 COL23A1Q86Y22 540 aaPredicted RBP8.02□□□□□ -1.12
CASC18-202ENST00000548557 NLGN1Q8N2Q7 840 aa8.02□□□□□ -1.12
CASC18-202ENST00000548557 SETDB2Q96T68 719 aa8.02□□□□□ -1.12
CASC18-202ENST00000548557 SRP68Q9UHB9 627 aaKnown RBP8.02□□□□□ -1.12
CASC18-202ENST00000548557 PNPLA7Q6ZV29 1317 aa8.02□□□□□ -1.13
CASC18-202ENST00000548557 SCN7AQ01118 1682 aa8.02□□□□□ -1.13
CASC18-202ENST00000548557 BCORQ6W2J9 1755 aa8.02□□□□□ -1.13
CASC18-202ENST00000548557 CLGNO14967 610 aa8.02□□□□□ -1.13
CASC18-202ENST00000548557 SMIM5Q71RC9 77 aa8.02□□□□□ -1.13
CASC18-202ENST00000548557 ANTXR1Q9H6X2 564 aa8.02□□□□□ -1.13
CASC18-202ENST00000548557 UBN2Q6ZU65 1347 aa8.02□□□□□ -1.13
CASC18-202ENST00000548557 NUP98P52948 1817 aa8.02□□□□□ -1.13
CASC18-202ENST00000548557 MARCH6O60337 910 aa8.01□□□□□ -1.13
CASC18-202ENST00000548557 GPTP24298 496 aa8.01□□□□□ -1.13
CASC18-202ENST00000548557 CASP7P55210 303 aa8.01□□□□□ -1.13
CASC18-202ENST00000548557 TBC1D9BQ66K14 1250 aa8.01□□□□□ -1.13
CASC18-202ENST00000548557 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
CASC18-202ENST00000548557 UTP14AQ9BVJ6 771 aaKnown RBP8.01□□□□□ -1.13
CASC18-202ENST00000548557 TBC1D2Q9BYX2 928 aa8.01□□□□□ -1.13
CASC18-202ENST00000548557 NYXQ9GZU5 481 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms