RNA–Protein interactions for RNA: ENST00000548140.1

HECTD4-206, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HECTD4, Length 1,426 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-206ENST00000548140 LAMB2P55268 1798 aa20.32■□□□□ 0.84
HECTD4-206ENST00000548140 SF3B3Q15393 1217 aaKnown RBP20.31■□□□□ 0.84
HECTD4-206ENST00000548140 CCDC152Q4G0S7 254 aa20.31■□□□□ 0.84
HECTD4-206ENST00000548140 B4GALNT3Q6L9W6 998 aa20.31■□□□□ 0.84
HECTD4-206ENST00000548140 SSH3Q8TE77 659 aa20.31■□□□□ 0.84
HECTD4-206ENST00000548140 RIC1Q4ADV7 1423 aa20.3■□□□□ 0.84
HECTD4-206ENST00000548140 IGHDP01880 384 aa20.3■□□□□ 0.84
HECTD4-206ENST00000548140 HDAC1Q13547 482 aaPredicted RBP20.3■□□□□ 0.84
HECTD4-206ENST00000548140 POLA2Q14181 598 aa20.3■□□□□ 0.84
HECTD4-206ENST00000548140 FAM161AQ3B820 660 aa20.3■□□□□ 0.84
HECTD4-206ENST00000548140 BRIP1Q9BX63 1249 aa20.3■□□□□ 0.84
HECTD4-206ENST00000548140 GREM2Q9H772 168 aa20.3■□□□□ 0.84
HECTD4-206ENST00000548140 MYH3P11055 1940 aa20.3■□□□□ 0.84
HECTD4-206ENST00000548140 CCDC57Q2TAC2 916 aa20.29■□□□□ 0.84
HECTD4-206ENST00000548140 ITGA6P23229 1130 aa20.28■□□□□ 0.84
HECTD4-206ENST00000548140 PDE6BP35913 854 aa20.28■□□□□ 0.84
HECTD4-206ENST00000548140 IFIT5Q13325 482 aaKnown RBP20.28■□□□□ 0.84
HECTD4-206ENST00000548140 TNRC6CQ9HCJ0 1690 aaKnown RBP20.28■□□□□ 0.84
HECTD4-206ENST00000548140 ANKRD18BA2A2Z9 1011 aa20.27■□□□□ 0.84
HECTD4-206ENST00000548140 RFX5P48382 616 aaPredicted RBP20.27■□□□□ 0.84
HECTD4-206ENST00000548140 SGIP1Q9BQI5 828 aa20.27■□□□□ 0.84
HECTD4-206ENST00000548140 SPON1Q9HCB6 807 aa20.27■□□□□ 0.84
HECTD4-206ENST00000548140 SEC31BQ9NQW1 1179 aa20.27■□□□□ 0.84
HECTD4-206ENST00000548140 PTGER2P43116 358 aa20.27■□□□□ 0.83
HECTD4-206ENST00000548140 TAF7LQ5H9L4 462 aa20.27■□□□□ 0.83
HECTD4-206ENST00000548140 KLHDC4Q8TBB5 520 aa20.27■□□□□ 0.83
HECTD4-206ENST00000548140 RPGRQ92834 1020 aaKnown RBP20.27■□□□□ 0.83
HECTD4-206ENST00000548140 PA2G4Q9UQ80 394 aaKnown RBP20.27■□□□□ 0.83
HECTD4-206ENST00000548140 KLRG2A4D1S0 409 aaPredicted RBP20.26■□□□□ 0.83
HECTD4-206ENST00000548140 CRY2Q49AN0 593 aa20.26■□□□□ 0.83
HECTD4-206ENST00000548140 DDX46Q7L014 1031 aaKnown RBP20.26■□□□□ 0.83
HECTD4-206ENST00000548140 ZNF594Q96JF6 807 aaPredicted RBP20.26■□□□□ 0.83
HECTD4-206ENST00000548140 RTL9Q8NET4 1388 aa20.25■□□□□ 0.83
HECTD4-206ENST00000548140 ANKRD31Q8N7Z5 1873 aa20.25■□□□□ 0.83
HECTD4-206ENST00000548140 SURF6O75683 361 aaKnown RBP20.25■□□□□ 0.83
HECTD4-206ENST00000548140 PTPN12Q05209 780 aaKnown RBP20.25■□□□□ 0.83
HECTD4-206ENST00000548140 C10orf71Q711Q0 1435 aa20.25■□□□□ 0.83
HECTD4-206ENST00000548140 CDC5LQ99459 802 aaKnown RBP20.24■□□□□ 0.83
HECTD4-206ENST00000548140 SIL1Q9H173 461 aa20.24■□□□□ 0.83
HECTD4-206ENST00000548140 DCTPP1Q9H773 170 aa20.24■□□□□ 0.83
HECTD4-206ENST00000548140 COPRSQ9NQ92 184 aa20.24■□□□□ 0.83
HECTD4-206ENST00000548140 EXOC6BQ9Y2D4 811 aa20.24■□□□□ 0.83
HECTD4-206ENST00000548140 H0YIN7 160 aa20.23■□□□□ 0.83
HECTD4-206ENST00000548140 C2CD5Q86YS7 1000 aa20.23■□□□□ 0.83
HECTD4-206ENST00000548140 RBM17Q96I25 401 aaKnown RBP20.23■□□□□ 0.83
HECTD4-206ENST00000548140 G3BP1Q13283 466 aaKnown RBP eCLIP20.22■□□□□ 0.83
HECTD4-206ENST00000548140 OS9Q13438 667 aaPredicted RBP20.22■□□□□ 0.83
HECTD4-206ENST00000548140 CENPQQ7L2Z9 268 aaPredicted RBP20.22■□□□□ 0.83
HECTD4-206ENST00000548140 PPP1R1BQ9UD71 204 aaPredicted RBP20.22■□□□□ 0.83
HECTD4-206ENST00000548140 SRGNP10124 158 aa20.21■□□□□ 0.83
HECTD4-206ENST00000548140 NPR1P16066 1061 aa20.21■□□□□ 0.83
HECTD4-206ENST00000548140 IGHMBP2P38935 993 aaKnown RBP20.21■□□□□ 0.83
HECTD4-206ENST00000548140 LDHAL6AQ6ZMR3 332 aa20.21■□□□□ 0.83
HECTD4-206ENST00000548140 ANKRD18AQ8IVF6 992 aa20.21■□□□□ 0.83
HECTD4-206ENST00000548140 KLHL34Q8N239 644 aa20.21■□□□□ 0.83
HECTD4-206ENST00000548140 CELF1Q92879 486 aaKnown RBP20.21■□□□□ 0.83
HECTD4-206ENST00000548140 GCC1Q96CN9 775 aa20.21■□□□□ 0.83
HECTD4-206ENST00000548140 PDZRN3Q9UPQ7 1066 aa20.21■□□□□ 0.83
HECTD4-206ENST00000548140 NOP58Q9Y2X3 529 aaKnown RBP20.21■□□□□ 0.83
HECTD4-206ENST00000548140 KDM2BQ8NHM5 1336 aa20.21■□□□□ 0.83
HECTD4-206ENST00000548140 APBB1O00213 710 aa20.2■□□□□ 0.82
HECTD4-206ENST00000548140 CHRNA5P30532 468 aa20.2■□□□□ 0.82
HECTD4-206ENST00000548140 HOXA10P31260 410 aaPredicted RBP20.2■□□□□ 0.82
HECTD4-206ENST00000548140 HSP90AB4PQ58FF6 505 aa20.2■□□□□ 0.82
HECTD4-206ENST00000548140 SMC5Q8IY18 1101 aa20.2■□□□□ 0.82
HECTD4-206ENST00000548140 MASTLQ96GX5 879 aa20.2■□□□□ 0.82
HECTD4-206ENST00000548140 MPHOSPH8Q99549 860 aa20.2■□□□□ 0.82
HECTD4-206ENST00000548140 PUS3Q9BZE2 481 aaKnown RBP20.2■□□□□ 0.82
HECTD4-206ENST00000548140 CNNM1Q9NRU3 951 aa20.2■□□□□ 0.82
HECTD4-206ENST00000548140 EYA2O00167 538 aa20.19■□□□□ 0.82
HECTD4-206ENST00000548140 RPS8P62241 208 aaKnown RBP20.19■□□□□ 0.82
HECTD4-206ENST00000548140 GRAPQ13588 217 aa20.19■□□□□ 0.82
HECTD4-206ENST00000548140 LRRC24Q50LG9 513 aa20.19■□□□□ 0.82
HECTD4-206ENST00000548140 GRAPLQ8TC17 118 aaPredicted RBP20.19■□□□□ 0.82
HECTD4-206ENST00000548140 ZNF622Q969S3 477 aaKnown RBP eCLIP20.19■□□□□ 0.82
HECTD4-206ENST00000548140 CRAMP1Q96RY5 1269 aa20.19■□□□□ 0.82
HECTD4-206ENST00000548140 RAB11FIP3O75154 756 aa20.19■□□□□ 0.82
HECTD4-206ENST00000548140 FBXO3Q9UK99 471 aa20.19■□□□□ 0.82
HECTD4-206ENST00000548140 ALDH1B1P30837 517 aa20.18■□□□□ 0.82
HECTD4-206ENST00000548140 CD2APQ9Y5K6 639 aa20.18■□□□□ 0.82
HECTD4-206ENST00000548140 COL4A1P02462 1669 aa20.17■□□□□ 0.82
HECTD4-206ENST00000548140 TAF1P21675 1872 aa20.17■□□□□ 0.82
HECTD4-206ENST00000548140 A0A0G2JLW4 131 aa20.17■□□□□ 0.82
HECTD4-206ENST00000548140 CIAO1O76071 339 aa20.17■□□□□ 0.82
HECTD4-206ENST00000548140 IL15P40933 162 aaPredicted RBP20.17■□□□□ 0.82
HECTD4-206ENST00000548140 TGFB2P61812 414 aa20.17■□□□□ 0.82
HECTD4-206ENST00000548140 ANKRD45Q5TZF3 282 aa20.17■□□□□ 0.82
HECTD4-206ENST00000548140 STYK1Q6J9G0 422 aa20.17■□□□□ 0.82
HECTD4-206ENST00000548140 ATG9AQ7Z3C6 839 aa20.17■□□□□ 0.82
HECTD4-206ENST00000548140 BSDC1Q9NW68 430 aaPredicted RBP20.17■□□□□ 0.82
HECTD4-206ENST00000548140 COL11A2P13942 1736 aaPredicted RBP20.16■□□□□ 0.82
HECTD4-206ENST00000548140 KIF13BQ9NQT8 1826 aa20.16■□□□□ 0.82
HECTD4-206ENST00000548140 DPEP1P16444 411 aa20.16■□□□□ 0.82
HECTD4-206ENST00000548140 ERC1Q8IUD2 1116 aa20.16■□□□□ 0.82
HECTD4-206ENST00000548140 BCL11AQ9H165 835 aa20.16■□□□□ 0.82
HECTD4-206ENST00000548140 ZBTB47Q9UFB7 747 aaPredicted RBP20.16■□□□□ 0.82
HECTD4-206ENST00000548140 RIPOR2Q9Y4F9 1068 aa20.16■□□□□ 0.82
HECTD4-206ENST00000548140 BBOX1O75936 387 aa20.15■□□□□ 0.82
HECTD4-206ENST00000548140 SASH1O94885 1247 aa20.15■□□□□ 0.82
HECTD4-206ENST00000548140 RHPN1Q8TCX5 695 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms