RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 BBOX1O75936 387 aa13.95□□□□□ -0.18
GCN1-202ENST00000547263 HSP90B1P14625 803 aaKnown RBP13.95□□□□□ -0.18
GCN1-202ENST00000547263 HNRNPUQ00839 825 aaKnown RBP eCLIP13.95□□□□□ -0.18
GCN1-202ENST00000547263 GRAPQ13588 217 aa13.95□□□□□ -0.18
GCN1-202ENST00000547263 C9orf131Q5VYM1 1079 aa13.95□□□□□ -0.18
GCN1-202ENST00000547263 GRAPLQ8TC17 118 aaPredicted RBP13.95□□□□□ -0.18
GCN1-202ENST00000547263 ATP6V0A2Q9Y487 856 aa13.95□□□□□ -0.18
GCN1-202ENST00000547263 UTYO14607 1347 aa13.94□□□□□ -0.18
GCN1-202ENST00000547263 FKBP4Q02790 459 aaKnown RBP eCLIP13.94□□□□□ -0.18
GCN1-202ENST00000547263 OLFM4Q6UX06 510 aa13.94□□□□□ -0.18
GCN1-202ENST00000547263 TMC4Q7Z404 712 aa13.94□□□□□ -0.18
GCN1-202ENST00000547263 SP8Q8IXZ3 490 aa13.94□□□□□ -0.18
GCN1-202ENST00000547263 RTKN2Q8IZC4 609 aa13.94□□□□□ -0.18
GCN1-202ENST00000547263 TAOK3Q9H2K8 898 aa13.94□□□□□ -0.18
GCN1-202ENST00000547263 PPEF1O14829 653 aaPredicted RBP13.93□□□□□ -0.18
GCN1-202ENST00000547263 ALDH1L1O75891 902 aa13.93□□□□□ -0.18
GCN1-202ENST00000547263 RARSP54136 660 aaKnown RBP13.93□□□□□ -0.18
GCN1-202ENST00000547263 SLC51AQ86UW1 340 aa13.93□□□□□ -0.18
GCN1-202ENST00000547263 RTFDC1Q9BY42 306 aaPredicted RBP13.93□□□□□ -0.18
GCN1-202ENST00000547263 COL4A5P29400 1685 aa13.93□□□□□ -0.18
GCN1-202ENST00000547263 WDR90Q96KV7 1748 aa13.93□□□□□ -0.18
GCN1-202ENST00000547263 CSF1RP07333 972 aa13.92□□□□□ -0.18
GCN1-202ENST00000547263 CTSWP56202 376 aa13.92□□□□□ -0.18
GCN1-202ENST00000547263 DDX46Q7L014 1031 aaKnown RBP13.92□□□□□ -0.18
GCN1-202ENST00000547263 TTLL11Q8NHH1 800 aa13.92□□□□□ -0.18
GCN1-202ENST00000547263 CELF1Q92879 486 aaKnown RBP13.92□□□□□ -0.18
GCN1-202ENST00000547263 RNF181Q9P0P0 153 aa13.92□□□□□ -0.18
GCN1-202ENST00000547263 RTL5Q5HYW3 569 aaPredicted RBP13.91□□□□□ -0.18
GCN1-202ENST00000547263 UBE3BQ7Z3V4 1068 aa13.91□□□□□ -0.18
GCN1-202ENST00000547263 VPS33BQ9H267 617 aa13.91□□□□□ -0.18
GCN1-202ENST00000547263 CCDC152Q4G0S7 254 aa13.9□□□□□ -0.18
GCN1-202ENST00000547263 ARHGAP45Q92619 1136 aa13.9□□□□□ -0.18
GCN1-202ENST00000547263 JARID2Q92833 1246 aaPredicted RBP13.9□□□□□ -0.18
GCN1-202ENST00000547263 ZNF219Q9P2Y4 722 aaPredicted RBP13.9□□□□□ -0.18
GCN1-202ENST00000547263 A0A1B0GUL6 1792 aa13.9□□□□□ -0.18
GCN1-202ENST00000547263 GRM8O00222 908 aa13.89□□□□□ -0.19
GCN1-202ENST00000547263 RPS8P62241 208 aaKnown RBP13.89□□□□□ -0.19
GCN1-202ENST00000547263 FOXO4P98177 505 aa13.89□□□□□ -0.19
GCN1-202ENST00000547263 BCL2L13Q9BXK5 485 aa13.89□□□□□ -0.19
GCN1-202ENST00000547263 SRCIN1Q9C0H9 1055 aa13.89□□□□□ -0.19
GCN1-202ENST00000547263 SEC31BQ9NQW1 1179 aa13.89□□□□□ -0.19
GCN1-202ENST00000547263 SMC4Q9NTJ3 1288 aa13.89□□□□□ -0.19
GCN1-202ENST00000547263 SPEF2Q9C093 1822 aa13.88□□□□□ -0.19
GCN1-202ENST00000547263 FZD9O00144 591 aa13.88□□□□□ -0.19
GCN1-202ENST00000547263 IARSP41252 1262 aaKnown RBP13.88□□□□□ -0.19
GCN1-202ENST00000547263 KAZALD1Q96I82 304 aa13.88□□□□□ -0.19
GCN1-202ENST00000547263 PODXL2Q9NZ53 605 aa13.88□□□□□ -0.19
GCN1-202ENST00000547263 KIF16BQ96L93 1317 aa13.88□□□□□ -0.19
GCN1-202ENST00000547263 GLTPD2A6NH11 291 aa13.87□□□□□ -0.19
GCN1-202ENST00000547263 KIF3CO14782 793 aa13.87□□□□□ -0.19
GCN1-202ENST00000547263 GREM2Q9H772 168 aa13.87□□□□□ -0.19
GCN1-202ENST00000547263 ZNF277Q9NRM2 450 aaPredicted RBP13.87□□□□□ -0.19
GCN1-202ENST00000547263 POTECB2RU33 542 aa13.86□□□□□ -0.19
GCN1-202ENST00000547263 RABL6Q3YEC7 729 aaPredicted RBP13.86□□□□□ -0.19
GCN1-202ENST00000547263 EPHA10Q5JZY3 1008 aa13.86□□□□□ -0.19
GCN1-202ENST00000547263 USP44Q9H0E7 712 aa13.86□□□□□ -0.19
GCN1-202ENST00000547263 NOB1Q9ULX3 412 aaKnown RBP13.86□□□□□ -0.19
GCN1-202ENST00000547263 SCN4AP35499 1836 aa13.85□□□□□ -0.19
GCN1-202ENST00000547263 PSME4Q14997 1843 aa13.85□□□□□ -0.19
GCN1-202ENST00000547263 NBPF7P0C2Y1 421 aaPredicted RBP13.85□□□□□ -0.19
GCN1-202ENST00000547263 KIAA2012Q0VF49 1180 aa13.85□□□□□ -0.19
GCN1-202ENST00000547263 MPNDQ8N594 471 aa13.85□□□□□ -0.19
GCN1-202ENST00000547263 SUPT20HQ8NEM7 779 aa13.85□□□□□ -0.19
GCN1-202ENST00000547263 CDC5LQ99459 802 aaKnown RBP13.85□□□□□ -0.19
GCN1-202ENST00000547263 API5Q9BZZ5 524 aaKnown RBP13.85□□□□□ -0.19
GCN1-202ENST00000547263 GPBP1L1Q9HC44 474 aaPredicted RBP13.85□□□□□ -0.19
GCN1-202ENST00000547263 BSDC1Q9NW68 430 aaPredicted RBP13.85□□□□□ -0.19
GCN1-202ENST00000547263 KDM2BQ8NHM5 1336 aa13.85□□□□□ -0.19
GCN1-202ENST00000547263 ZNF646O15015 1829 aaPredicted RBP13.85□□□□□ -0.19
GCN1-202ENST00000547263 FAM161AQ3B820 660 aa13.84□□□□□ -0.19
GCN1-202ENST00000547263 INTS3Q68E01 1043 aaKnown RBP13.84□□□□□ -0.19
GCN1-202ENST00000547263 SLC4A10Q6U841 1118 aa13.84□□□□□ -0.19
GCN1-202ENST00000547263 L3MBTL3Q96JM7 780 aaPredicted RBP13.84□□□□□ -0.19
GCN1-202ENST00000547263 ADAMTSL1Q8N6G6 1762 aa13.83□□□□□ -0.19
GCN1-202ENST00000547263 BCAR3O75815 825 aa13.83□□□□□ -0.2
GCN1-202ENST00000547263 ITGA6P23229 1130 aa13.83□□□□□ -0.2
GCN1-202ENST00000547263 CCT4P50991 539 aaKnown RBP13.83□□□□□ -0.2
GCN1-202ENST00000547263 GPSM2P81274 684 aa13.83□□□□□ -0.2
GCN1-202ENST00000547263 DPP8Q6V1X1 898 aaPredicted RBP13.83□□□□□ -0.2
GCN1-202ENST00000547263 ANKRD18AQ8IVF6 992 aa13.83□□□□□ -0.2
GCN1-202ENST00000547263 SUCLG2Q96I99 432 aa13.83□□□□□ -0.2
GCN1-202ENST00000547263 NMRK2Q9NPI5 230 aa13.83□□□□□ -0.2
GCN1-202ENST00000547263 POLLQ9UGP5 575 aa13.83□□□□□ -0.2
GCN1-202ENST00000547263 TRIM27P14373 513 aa13.82□□□□□ -0.2
GCN1-202ENST00000547263 ANKRD44Q8N8A2 993 aa13.82□□□□□ -0.2
GCN1-202ENST00000547263 C9orf78Q9NZ63 289 aaPredicted RBP13.82□□□□□ -0.2
GCN1-202ENST00000547263 MINPP1Q9UNW1 487 aa13.82□□□□□ -0.2
GCN1-202ENST00000547263 ZNF541Q9H0D2 1346 aa13.82□□□□□ -0.2
GCN1-202ENST00000547263 SCN9AQ15858 1988 aa13.82□□□□□ -0.2
GCN1-202ENST00000547263 ZNF609O15014 1411 aa13.81□□□□□ -0.2
GCN1-202ENST00000547263 AOC3Q16853 763 aa13.81□□□□□ -0.2
GCN1-202ENST00000547263 DPY19L2Q6NUT2 758 aa13.81□□□□□ -0.2
GCN1-202ENST00000547263 LMBR1LQ6UX01 489 aa13.81□□□□□ -0.2
GCN1-202ENST00000547263 ATF7IPQ6VMQ6 1270 aa13.81□□□□□ -0.2
GCN1-202ENST00000547263 TBC1D16Q8TBP0 767 aa13.81□□□□□ -0.2
GCN1-202ENST00000547263 CCDC85AQ96PX6 553 aaPredicted RBP13.81□□□□□ -0.2
GCN1-202ENST00000547263 TMX4Q9H1E5 349 aaPredicted RBP13.81□□□□□ -0.2
GCN1-202ENST00000547263 XDHP47989 1333 aa13.81□□□□□ -0.2
GCN1-202ENST00000547263 IRS2Q9Y4H2 1338 aa13.81□□□□□ -0.2
GCN1-202ENST00000547263 IPO8O15397 1037 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms