RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 HSPA1BP0DMV9 641 aaKnown RBP18.54■□□□□ 0.56
TROAP-203ENST00000546735 LMOD1P29536 600 aaPredicted RBP18.54■□□□□ 0.56
TROAP-203ENST00000546735 CALD1Q05682 793 aaKnown RBP18.54■□□□□ 0.56
TROAP-203ENST00000546735 CNTROBQ8N137 903 aa18.54■□□□□ 0.56
TROAP-203ENST00000546735 RTFDC1Q9BY42 306 aaPredicted RBP18.54■□□□□ 0.56
TROAP-203ENST00000546735 ADAMTSL1Q8N6G6 1762 aa18.53■□□□□ 0.56
TROAP-203ENST00000546735 COL13A1Q5TAT6 717 aaPredicted RBP18.53■□□□□ 0.56
TROAP-203ENST00000546735 SUPT20HQ8NEM7 779 aa18.53■□□□□ 0.56
TROAP-203ENST00000546735 CELF1Q92879 486 aaKnown RBP18.53■□□□□ 0.56
TROAP-203ENST00000546735 GOLGA2Q08379 1002 aa18.52■□□□□ 0.56
TROAP-203ENST00000546735 TSPYL6Q8N831 410 aa18.52■□□□□ 0.56
TROAP-203ENST00000546735 MYD88Q99836 296 aa18.52■□□□□ 0.56
TROAP-203ENST00000546735 ZNRF3Q9ULT6 936 aa18.52■□□□□ 0.56
TROAP-203ENST00000546735 DDX60Q8IY21 1712 aaKnown RBP18.52■□□□□ 0.55
TROAP-203ENST00000546735 COL4A1P02462 1669 aa18.51■□□□□ 0.55
TROAP-203ENST00000546735 IRS4O14654 1257 aaPredicted RBP18.51■□□□□ 0.55
TROAP-203ENST00000546735 CXCL9Q07325 125 aa18.51■□□□□ 0.55
TROAP-203ENST00000546735 KIAA2012Q0VF49 1180 aa18.51■□□□□ 0.55
TROAP-203ENST00000546735 TRIM28Q13263 835 aaKnown RBP18.51■□□□□ 0.55
TROAP-203ENST00000546735 SF3B3Q15393 1217 aaKnown RBP18.51■□□□□ 0.55
TROAP-203ENST00000546735 JARID2Q92833 1246 aaPredicted RBP18.51■□□□□ 0.55
TROAP-203ENST00000546735 TSR2Q969E8 191 aaKnown RBP18.51■□□□□ 0.55
TROAP-203ENST00000546735 VPS33BQ9H267 617 aa18.51■□□□□ 0.55
TROAP-203ENST00000546735 TAF1P21675 1872 aa18.51■□□□□ 0.55
TROAP-203ENST00000546735 TMEM88BA6NKF7 163 aa18.5■□□□□ 0.55
TROAP-203ENST00000546735 FMR1Q06787 632 aaKnown RBP eCLIP18.5■□□□□ 0.55
TROAP-203ENST00000546735 RAD17O75943 681 aa18.49■□□□□ 0.55
TROAP-203ENST00000546735 CNTNAP1P78357 1384 aa18.49■□□□□ 0.55
TROAP-203ENST00000546735 DUOX1Q9NRD9 1551 aa18.48■□□□□ 0.55
TROAP-203ENST00000546735 GMPSP49915 693 aaPredicted RBP18.48■□□□□ 0.55
TROAP-203ENST00000546735 CIAPIN1Q6FI81 312 aa18.48■□□□□ 0.55
TROAP-203ENST00000546735 TMC4Q7Z404 712 aa18.48■□□□□ 0.55
TROAP-203ENST00000546735 ZBTB38Q8NAP3 1195 aaPredicted RBP18.48■□□□□ 0.55
TROAP-203ENST00000546735 GPRC5DQ9NZD1 345 aa18.48■□□□□ 0.55
TROAP-203ENST00000546735 NSFL1CQ9UNZ2 370 aaKnown RBP18.48■□□□□ 0.55
TROAP-203ENST00000546735 YDJCA8MPS7 323 aa18.47■□□□□ 0.55
TROAP-203ENST00000546735 RIMBP2O15034 1052 aa18.47■□□□□ 0.55
TROAP-203ENST00000546735 VEGFBP49765 207 aa18.47■□□□□ 0.55
TROAP-203ENST00000546735 GPSM2P81274 684 aa18.47■□□□□ 0.55
TROAP-203ENST00000546735 CCDC30Q5VVM6 783 aa18.47■□□□□ 0.55
TROAP-203ENST00000546735 USP50Q70EL3 339 aaPredicted RBP18.47■□□□□ 0.55
TROAP-203ENST00000546735 SEC31BQ9NQW1 1179 aa18.47■□□□□ 0.55
TROAP-203ENST00000546735 WWC1Q8IX03 1113 aa18.46■□□□□ 0.55
TROAP-203ENST00000546735 GPR101Q96P66 508 aaPredicted RBP18.46■□□□□ 0.55
TROAP-203ENST00000546735 CCDC85AQ96PX6 553 aaPredicted RBP18.46■□□□□ 0.55
TROAP-203ENST00000546735 METTL22Q9BUU2 404 aaPredicted RBP18.46■□□□□ 0.55
TROAP-203ENST00000546735 ADARB2Q9NS39 739 aaKnown RBP18.46■□□□□ 0.55
TROAP-203ENST00000546735 PCNTO95613 3336 aa18.46■□□□□ 0.55
TROAP-203ENST00000546735 C6orf229H3BNL8 230 aa18.45■□□□□ 0.54
TROAP-203ENST00000546735 TRAF5O00463 557 aa18.45■□□□□ 0.54
TROAP-203ENST00000546735 BCL2L13Q9BXK5 485 aa18.45■□□□□ 0.54
TROAP-203ENST00000546735 DBNDD1Q9H9R9 158 aa18.45■□□□□ 0.54
TROAP-203ENST00000546735 MRS2Q9HD23 443 aa18.45■□□□□ 0.54
TROAP-203ENST00000546735 CWC25Q9NXE8 425 aaPredicted RBP18.45■□□□□ 0.54
TROAP-203ENST00000546735 POLLQ9UGP5 575 aa18.45■□□□□ 0.54
TROAP-203ENST00000546735 MAP3K2Q9Y2U5 619 aa18.45■□□□□ 0.54
TROAP-203ENST00000546735 LRRC37AA6NMS7 1700 aa18.44■□□□□ 0.54
TROAP-203ENST00000546735 SHTN1A0MZ66 631 aa18.44■□□□□ 0.54
TROAP-203ENST00000546735 DDX58O95786 925 aaKnown RBP18.44■□□□□ 0.54
TROAP-203ENST00000546735 PCCAP05165 728 aaPredicted RBP18.44■□□□□ 0.54
TROAP-203ENST00000546735 RPS8P62241 208 aaKnown RBP18.44■□□□□ 0.54
TROAP-203ENST00000546735 CCDC27Q2M243 656 aa18.44■□□□□ 0.54
TROAP-203ENST00000546735 WASHC4Q2M389 1173 aa18.44■□□□□ 0.54
TROAP-203ENST00000546735 CCDC191Q8NCU4 936 aa18.44■□□□□ 0.54
TROAP-203ENST00000546735 ABT1Q9ULW3 272 aaKnown RBP18.44■□□□□ 0.54
TROAP-203ENST00000546735 SALL2Q9Y467 1007 aaPredicted RBP18.44■□□□□ 0.54
TROAP-203ENST00000546735 PI4KAP2A4QPH2 592 aa18.43■□□□□ 0.54
TROAP-203ENST00000546735 ZEB1P37275 1124 aaPredicted RBP18.43■□□□□ 0.54
TROAP-203ENST00000546735 TNIP1Q15025 636 aa18.43■□□□□ 0.54
TROAP-203ENST00000546735 DOK7Q18PE1 504 aa18.43■□□□□ 0.54
TROAP-203ENST00000546735 PI4KAP1Q8N8J0 262 aa18.43■□□□□ 0.54
TROAP-203ENST00000546735 ZBTB12Q9Y330 459 aaPredicted RBP18.43■□□□□ 0.54
TROAP-203ENST00000546735 ZNF316A6NFI3 1004 aaPredicted RBP18.42■□□□□ 0.54
TROAP-203ENST00000546735 RASSF10A6NK89 507 aa18.42■□□□□ 0.54
TROAP-203ENST00000546735 DEFB115Q30KQ5 88 aa18.42■□□□□ 0.54
TROAP-203ENST00000546735 TWISTNBQ3B726 338 aaPredicted RBP18.42■□□□□ 0.54
TROAP-203ENST00000546735 KSR2Q6VAB6 950 aa18.42■□□□□ 0.54
TROAP-203ENST00000546735 G2E3Q7L622 706 aa18.42■□□□□ 0.54
TROAP-203ENST00000546735 TNS4Q8IZW8 715 aa18.42■□□□□ 0.54
TROAP-203ENST00000546735 TBC1D16Q8TBP0 767 aa18.42■□□□□ 0.54
TROAP-203ENST00000546735 TRPM4Q8TD43 1214 aa18.42■□□□□ 0.54
TROAP-203ENST00000546735 KCNQ5Q9NR82 932 aa18.42■□□□□ 0.54
TROAP-203ENST00000546735 ANP32CO43423 234 aa18.41■□□□□ 0.54
TROAP-203ENST00000546735 PDE8AO60658 829 aa18.41■□□□□ 0.54
TROAP-203ENST00000546735 IGKV5-2P06315 115 aa18.41■□□□□ 0.54
TROAP-203ENST00000546735 HIRAP54198 1017 aaPredicted RBP18.41■□□□□ 0.54
TROAP-203ENST00000546735 STK31Q9BXU1 1019 aa18.41■□□□□ 0.54
TROAP-203ENST00000546735 CHMP4AQ9BY43 222 aa18.41■□□□□ 0.54
TROAP-203ENST00000546735 CNOT7Q9UIV1 285 aaKnown RBP18.41■□□□□ 0.54
TROAP-203ENST00000546735 PSMD14O00487 310 aa18.4■□□□□ 0.54
TROAP-203ENST00000546735 FOXN1O15353 648 aa18.4■□□□□ 0.54
TROAP-203ENST00000546735 CWF19L2Q2TBE0 894 aaKnown RBP18.4■□□□□ 0.54
TROAP-203ENST00000546735 CCDC152Q4G0S7 254 aa18.4■□□□□ 0.54
TROAP-203ENST00000546735 CST9Q5W186 159 aa18.4■□□□□ 0.54
TROAP-203ENST00000546735 GLIS2Q9BZE0 524 aaPredicted RBP18.4■□□□□ 0.54
TROAP-203ENST00000546735 ECE2O60344 883 aa18.39■□□□□ 0.53
TROAP-203ENST00000546735 CAPN15O75808 1086 aa18.39■□□□□ 0.53
TROAP-203ENST00000546735 HSP90B1P14625 803 aaKnown RBP18.39■□□□□ 0.53
TROAP-203ENST00000546735 PAXIP1Q6ZW49 1069 aaPredicted RBP18.39■□□□□ 0.53
TROAP-203ENST00000546735 MICALL2Q8IY33 904 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms