RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 CEMIPQ8WUJ3 1361 aa20.8■□□□□ 0.92
CLSTN3-216ENST00000545663 UBN2Q6ZU65 1347 aa20.79■□□□□ 0.92
CLSTN3-216ENST00000545663 POLR2AP24928 1970 aaKnown RBP20.79■□□□□ 0.92
CLSTN3-216ENST00000545663 DIAPH1O60610 1272 aaKnown RBP20.79■□□□□ 0.92
CLSTN3-216ENST00000545663 DPP8Q6V1X1 898 aaPredicted RBP20.79■□□□□ 0.92
CLSTN3-216ENST00000545663 SUPT20HQ8NEM7 779 aa20.79■□□□□ 0.92
CLSTN3-216ENST00000545663 DCPSQ96C86 337 aaKnown RBP20.79■□□□□ 0.92
CLSTN3-216ENST00000545663 COLQQ9Y215 455 aaPredicted RBP20.79■□□□□ 0.92
CLSTN3-216ENST00000545663 ASTN2O75129 1339 aaPredicted RBP20.78■□□□□ 0.92
CLSTN3-216ENST00000545663 GAS2L2Q8NHY3 880 aa20.78■□□□□ 0.92
CLSTN3-216ENST00000545663 TMX4Q9H1E5 349 aaPredicted RBP20.78■□□□□ 0.92
CLSTN3-216ENST00000545663 GPR25O00155 361 aa20.76■□□□□ 0.91
CLSTN3-216ENST00000545663 PSMD14O00487 310 aa20.76■□□□□ 0.91
CLSTN3-216ENST00000545663 TTLL7Q6ZT98 887 aa20.76■□□□□ 0.91
CLSTN3-216ENST00000545663 REM2Q8IYK8 340 aaPredicted RBP20.76■□□□□ 0.91
CLSTN3-216ENST00000545663 MPNDQ8N594 471 aa20.76■□□□□ 0.91
CLSTN3-216ENST00000545663 ABCC4O15439 1325 aa20.76■□□□□ 0.91
CLSTN3-216ENST00000545663 DPF2Q92785 391 aa20.75■□□□□ 0.91
CLSTN3-216ENST00000545663 CDCA5Q96FF9 252 aa20.75■□□□□ 0.91
CLSTN3-216ENST00000545663 PHACTR3Q96KR7 559 aa20.75■□□□□ 0.91
CLSTN3-216ENST00000545663 R3HDMLQ9H3Y0 253 aa20.75■□□□□ 0.91
CLSTN3-216ENST00000545663 NTSR2O95665 410 aa20.74■□□□□ 0.91
CLSTN3-216ENST00000545663 MOB2Q70IA6 237 aa20.74■□□□□ 0.91
CLSTN3-216ENST00000545663 KCNQ5Q9NR82 932 aa20.74■□□□□ 0.91
CLSTN3-216ENST00000545663 KNSTRNQ9Y448 316 aa20.74■□□□□ 0.91
CLSTN3-216ENST00000545663 U2SURPO15042 1029 aaKnown RBP20.73■□□□□ 0.91
CLSTN3-216ENST00000545663 SP8Q8IXZ3 490 aa20.73■□□□□ 0.91
CLSTN3-216ENST00000545663 COL6A3P12111 3177 aa20.73■□□□□ 0.91
CLSTN3-216ENST00000545663 TRIOBPQ9H2D6 2365 aa20.72■□□□□ 0.91
CLSTN3-216ENST00000545663 ERVV-1B6SEH8 477 aa20.72■□□□□ 0.91
CLSTN3-216ENST00000545663 NLRP3Q96P20 1036 aa20.72■□□□□ 0.91
CLSTN3-216ENST00000545663 ZBTB3Q9H5J0 574 aa20.72■□□□□ 0.91
CLSTN3-216ENST00000545663 GGA3Q9NZ52 723 aa20.72■□□□□ 0.91
CLSTN3-216ENST00000545663 MAP3K15Q6ZN16 1313 aa20.72■□□□□ 0.91
CLSTN3-216ENST00000545663 RANBP2P49792 3224 aaKnown RBP20.72■□□□□ 0.91
CLSTN3-216ENST00000545663 AMER1Q5JTC6 1135 aaPredicted RBP20.71■□□□□ 0.91
CLSTN3-216ENST00000545663 MCM10Q7L590 875 aa20.71■□□□□ 0.91
CLSTN3-216ENST00000545663 SULF1Q8IWU6 871 aa20.71■□□□□ 0.91
CLSTN3-216ENST00000545663 ZNF34Q8IZ26 560 aa20.71■□□□□ 0.91
CLSTN3-216ENST00000545663 CUL9Q8IWT3 2517 aa20.7■□□□□ 0.9
CLSTN3-216ENST00000545663 EN2P19622 333 aaPredicted RBP20.7■□□□□ 0.9
CLSTN3-216ENST00000545663 DBNDD1Q9H9R9 158 aa20.7■□□□□ 0.9
CLSTN3-216ENST00000545663 CEP290O15078 2479 aa20.69■□□□□ 0.9
CLSTN3-216ENST00000545663 NUP98P52948 1817 aa20.69■□□□□ 0.9
CLSTN3-216ENST00000545663 FKTNO75072 461 aa20.69■□□□□ 0.9
CLSTN3-216ENST00000545663 BBOX1O75936 387 aa20.69■□□□□ 0.9
CLSTN3-216ENST00000545663 MKRN3Q13064 507 aaKnown RBP20.69■□□□□ 0.9
CLSTN3-216ENST00000545663 SLC17A8Q8NDX2 589 aa20.69■□□□□ 0.9
CLSTN3-216ENST00000545663 RRP7AQ9Y3A4 280 aaKnown RBP20.69■□□□□ 0.9
CLSTN3-216ENST00000545663 IBTKQ9P2D0 1353 aaPredicted RBP20.69■□□□□ 0.9
CLSTN3-216ENST00000545663 UBE2Q2LH0YL09 131 aa20.68■□□□□ 0.9
CLSTN3-216ENST00000545663 KIF4BQ2VIQ3 1234 aa20.68■□□□□ 0.9
CLSTN3-216ENST00000545663 MIS18AQ9NYP9 233 aa20.68■□□□□ 0.9
CLSTN3-216ENST00000545663 SCAF8Q9UPN6 1271 aaKnown RBP20.68■□□□□ 0.9
CLSTN3-216ENST00000545663 RIMBP2O15034 1052 aa20.67■□□□□ 0.9
CLSTN3-216ENST00000545663 TM4SF4P48230 202 aa20.67■□□□□ 0.9
CLSTN3-216ENST00000545663 DCTN1Q14203 1278 aa20.67■□□□□ 0.9
CLSTN3-216ENST00000545663 KIF6Q6ZMV9 814 aa20.67■□□□□ 0.9
CLSTN3-216ENST00000545663 MYL6BP14649 208 aa20.66■□□□□ 0.9
CLSTN3-216ENST00000545663 NOM1Q5C9Z4 860 aaKnown RBP20.66■□□□□ 0.9
CLSTN3-216ENST00000545663 SLC10A5Q5PT55 438 aa20.66■□□□□ 0.9
CLSTN3-216ENST00000545663 ANGEL2Q5VTE6 544 aaKnown RBP20.66■□□□□ 0.9
CLSTN3-216ENST00000545663 RTL9Q8NET4 1388 aa20.66■□□□□ 0.9
CLSTN3-216ENST00000545663 DUOX1Q9NRD9 1551 aa20.66■□□□□ 0.9
CLSTN3-216ENST00000545663 DOK7Q18PE1 504 aa20.65■□□□□ 0.9
CLSTN3-216ENST00000545663 KIAA0100Q14667 2235 aaKnown RBP20.64■□□□□ 0.89
CLSTN3-216ENST00000545663 HCLS1P14317 486 aaPredicted RBP20.64■□□□□ 0.89
CLSTN3-216ENST00000545663 RPS12P25398 132 aaKnown RBP20.64■□□□□ 0.89
CLSTN3-216ENST00000545663 PRAMEF18Q5VWM3 479 aa20.64■□□□□ 0.89
CLSTN3-216ENST00000545663 PPP1R42Q7Z4L9 355 aa20.64■□□□□ 0.89
CLSTN3-216ENST00000545663 TRIM17Q9Y577 477 aa20.64■□□□□ 0.89
CLSTN3-216ENST00000545663 PAPPA2Q9BXP8 1791 aa20.64■□□□□ 0.89
CLSTN3-216ENST00000545663 SCARF1Q14162 830 aa20.63■□□□□ 0.89
CLSTN3-216ENST00000545663 WASHC4Q2M389 1173 aa20.63■□□□□ 0.89
CLSTN3-216ENST00000545663 INTS3Q68E01 1043 aaKnown RBP20.63■□□□□ 0.89
CLSTN3-216ENST00000545663 PRKAR2BP31323 418 aa20.62■□□□□ 0.89
CLSTN3-216ENST00000545663 FKBP1BP68106 108 aa20.62■□□□□ 0.89
CLSTN3-216ENST00000545663 COL3A1P02461 1466 aaPredicted RBP20.62■□□□□ 0.89
CLSTN3-216ENST00000545663 H0YGN5 161 aa20.61■□□□□ 0.89
CLSTN3-216ENST00000545663 ECE2O60344 883 aa20.61■□□□□ 0.89
CLSTN3-216ENST00000545663 GIGYF2Q6Y7W6 1299 aaKnown RBP20.61■□□□□ 0.89
CLSTN3-216ENST00000545663 OTOP1Q7RTM1 612 aa20.61■□□□□ 0.89
CLSTN3-216ENST00000545663 OTUD5Q96G74 571 aa20.61■□□□□ 0.89
CLSTN3-216ENST00000545663 UTP14AQ9BVJ6 771 aaKnown RBP20.61■□□□□ 0.89
CLSTN3-216ENST00000545663 HSPA5P11021 654 aaKnown RBP20.6■□□□□ 0.89
CLSTN3-216ENST00000545663 GRAPQ13588 217 aa20.6■□□□□ 0.89
CLSTN3-216ENST00000545663 DDX46Q7L014 1031 aaKnown RBP20.6■□□□□ 0.89
CLSTN3-216ENST00000545663 GRAPLQ8TC17 118 aaPredicted RBP20.6■□□□□ 0.89
CLSTN3-216ENST00000545663 POLLQ9UGP5 575 aa20.6■□□□□ 0.89
CLSTN3-216ENST00000545663 TAF1P21675 1872 aa20.59■□□□□ 0.89
CLSTN3-216ENST00000545663 TRIM26Q12899 539 aaPredicted RBP20.59■□□□□ 0.89
CLSTN3-216ENST00000545663 PARP10Q53GL7 1025 aa20.59■□□□□ 0.89
CLSTN3-216ENST00000545663 CC2D1BQ5T0F9 858 aaKnown RBP20.59■□□□□ 0.89
CLSTN3-216ENST00000545663 RTF1Q92541 710 aaKnown RBP20.59■□□□□ 0.89
CLSTN3-216ENST00000545663 CFHR5Q9BXR6 569 aa20.59■□□□□ 0.89
CLSTN3-216ENST00000545663 NSFL1CQ9UNZ2 370 aaKnown RBP20.59■□□□□ 0.89
CLSTN3-216ENST00000545663 C6orf229H3BNL8 230 aa20.58■□□□□ 0.89
CLSTN3-216ENST00000545663 ZNF428Q96B54 188 aa20.58■□□□□ 0.89
CLSTN3-216ENST00000545663 RSPH6AQ9H0K4 717 aa20.58■□□□□ 0.89
CLSTN3-216ENST00000545663 VIL1P09327 827 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms